Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0283161 Rosa chinensis HOM05D002214 ORTHO05D007367 2.9e-204 714.9 336 100.0
FvH4_2g17890 Fragaria vesca HOM05D002214 ORTHO05D007367 1.9e-163 579.3 334 81.7
FAN24G1013 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.9e-163 579.3 334 81.7
FAN15G3441 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.0e-161 573.5 334 81.1
FAN24G2408 Fragaria x ananassa HOM05D002214 ORTHO05D007367 7.4e-160 567.4 334 80.2
FAN27G1816 Fragaria x ananassa HOM05D002214 ORTHO05D007367 5.9e-141 504.6 317 76.0
FAN27G1164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.8e-89 333.6 310 57.1
RcHm_v2.0_Chr1g0318361 Rosa chinensis HOM05D002214 ORTHO05D007367 9.9e-80 301.2 336 54.5
FAN10G2270 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.2e-79 300.1 339 52.8
FAN03G2729 Fragaria x ananassa HOM05D002214 ORTHO05D007367 5.6e-75 285.4 328 53.0
MD07G1023200 Malus domestica HOM05D002214 ORTHO05D007367 3.4e-72 276.2 336 52.7
Prupe.2G024000 Prunus persica HOM05D002214 ORTHO05D007367 2.4e-70 270.0 336 50.9
Manes.07G010800 Manihot esculenta HOM05D002214 ORTHO05D007367 1.3e-63 247.7 319 48.9
Actinidia19424 Actinidia chinensis HOM05D002214 ORTHO05D007367 2.9e-63 246.5 318 47.2
CiPaw.14G003400 Carya illinoinensis HOM05D002214 ORTHO05D007367 4.9e-63 245.7 308 48.4
Ciclev10031605m.g Citrus clementina HOM05D002214 ORTHO05D007367 4.9e-63 245.7 319 48.3
Duzib138G1340 Durio zibethinus HOM05D002214 ORTHO05D007367 4.9e-63 245.7 313 49.5
AUR62023095 Chenopodium quinoa HOM05D002214 ORTHO05D007367 1.1e-62 244.6 306 48.0
TWI09G0406 Tripterygium wilfordii HOM05D002214 ORTHO05D007367 1.0e-60 238.0 323 45.5
Gorai.004G170100 Gossypium raimondii HOM05D002214 ORTHO05D007367 1.3e-60 237.7 315 46.7
Hma1.2p1_0685F.1_g203260 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 1.7e-60 237.3 326 46.9
Thecc.01G406200 Theobroma cacao HOM05D002214 ORTHO05D007367 1.7e-60 237.3 314 44.6
Eucgr.G03301 Eucalyptus grandis HOM05D002214 ORTHO05D007367 5.1e-60 235.7 307 45.6
GSVIVG01032215001 Vitis vinifera HOM05D002214 ORTHO05D007367 5.1e-60 235.7 315 47.9
Cfa010812 Carpinus fangiana HOM05D002214 ORTHO05D007367 6.6e-60 235.3 307 46.9
Gohir.A08G142300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 8.7e-60 235.0 315 46.7
Sc11g0009040 Simmondsia chinensis HOM05D002214 ORTHO05D007367 8.7e-60 235.0 330 43.0
Rhsim07G0058900 Rhododendron simsii HOM05D002214 ORTHO05D007367 1.1e-59 234.6 321 45.2
BcaC06g33377 Brassica carinata HOM05D002214 ORTHO05D007367 1.5e-59 234.2 317 46.7
C07p46730 Brassica napus HOM05D002214 ORTHO05D007367 1.9e-59 233.8 317 46.4
CANSAT80G0536 Cannabis sativa HOM05D002214 ORTHO05D007367 3.3e-59 233.0 324 44.1
A03p48610 Brassica napus HOM05D002214 ORTHO05D007367 5.6e-59 232.3 317 46.7
Eucgr.G03320 Eucalyptus grandis HOM05D002214 ORTHO05D007367 7.3e-59 231.9 307 45.6
THA.LOC104817574 Tarenaya hassleriana HOM05D002214 ORTHO05D007367 2.1e-58 230.3 319 46.4
BcaC06g33020 Brassica carinata HOM05D002214 ORTHO05D007367 2.8e-58 229.9 318 45.6
Potri.009G056500 Populus trichocarpa HOM05D002214 ORTHO05D007367 2.8e-58 229.9 315 46.3
Sp5g10260 Schrenkiella parvula HOM05D002214 ORTHO05D007367 3.6e-58 229.6 317 46.7
Nn7g36334 Nelumbo nucifera HOM05D002214 ORTHO05D007367 8.1e-58 228.4 315 45.7
Carub.0005s1835 Capsella rubella HOM05D002214 ORTHO05D007367 6.9e-57 225.3 324 45.7
CARHR161660 Cardamine hirsuta HOM05D002214 ORTHO05D007367 1.2e-56 224.6 323 44.6
BolC7t45191H Brassica oleracea HOM05D002214 ORTHO05D007367 2.0e-56 223.8 331 43.5
CsaV3_7G030710 Cucumis sativus L. HOM05D002214 ORTHO05D007367 4.5e-56 222.6 328 45.7
AT3G52030 Arabidopsis thaliana HOM05D002214 ORTHO05D007367 7.6e-56 221.9 323 44.3
Thhalv10010397m.g Eutrema salsugineum HOM05D002214 ORTHO05D007367 9.9e-56 221.5 317 44.8
Lalb_Chr25g0282551 Lupinus albus HOM05D002214 ORTHO05D007367 8.4e-55 218.4 325 44.6
BraA03t13966Z Brassica rapa HOM05D002214 ORTHO05D007367 1.4e-54 217.6 335 43.6
arahy.Tifrunner.gnm1.ann1.KRTV89 Arachis hypogaea HOM05D002214 ORTHO05D007367 5.4e-54 215.7 336 43.2
Sopen01g034840 Solanum pennellii HOM05D002214 ORTHO05D007367 9.3e-54 214.9 329 44.7
arahy.Tifrunner.gnm1.ann1.IP56PK Arachis hypogaea HOM05D002214 ORTHO05D007367 1.2e-53 214.5 318 43.4
Sed0008197 Sechium edule HOM05D002214 ORTHO05D007367 1.2e-53 214.5 325 43.4
FAN06G2164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.1e-53 213.8 256 54.3
Oeu051405.1 Olea europaea HOM05D002214 ORTHO05D007367 2.7e-53 213.4 333 40.8
Phvul.005G035100 Phaseolus vulgaris HOM05D002214 ORTHO05D007367 2.7e-53 213.4 321 43.6
Glyma.11G159230 Glycine max HOM05D002214 ORTHO05D007367 4.6e-53 212.6 303 44.6
AL5G32570 Arabidopsis lyrata HOM05D002214 ORTHO05D007367 6.0e-53 212.2 340 43.5
DCAR_022375 Daucus carota HOM05D002214 ORTHO05D007367 7.9e-53 211.8 321 42.4
Psat5g212440 Pisum sativum HOM05D002214 ORTHO05D007367 1.3e-52 211.1 330 42.4
VMungo1217G0001 Vigna mungo HOM05D002214 ORTHO05D007367 1.3e-52 211.1 341 41.6
Aqoxy2G00221 Aquilegia oxysepala HOM05D002214 ORTHO05D007367 1.8e-52 210.7 309 43.7
Lsat_1_v5_gn_7_35840 Lactuca sativa HOM05D002214 ORTHO05D007367 1.8e-52 210.7 329 40.4
TPR.G14558 Trifolium pratense HOM05D002214 ORTHO05D007367 1.8e-52 210.7 324 41.7
Migut.N01800 Erythranthe guttata HOM05D002214 ORTHO05D007367 2.3e-52 210.3 321 43.3
Solyc01g087910.4 Solanum lycopersicum HOM05D002214 ORTHO05D007367 2.3e-52 210.3 329 44.1
Ca_24837_v3 Cicer arietinum L. HOM05D002214 ORTHO05D007367 5.1e-52 209.1 320 42.8
SGA_v2.0_scaffold5G02954 Striga asiatica HOM05D002214 ORTHO05D007367 5.1e-52 209.1 319 39.5
Medtr3g034210 Medicago truncatula HOM05D002214 ORTHO05D007367 6.7e-52 208.8 326 41.7
vmacro13697 Vaccinium macrocarpon HOM05D002214 ORTHO05D007367 1.1e-51 208.0 362 39.2
TAR633G1256 Trochodendron aralioides HOM05D002214 ORTHO05D007367 1.5e-51 207.6 240 50.4
Lj3g0007976 Lotus japonicus HOM05D002214 ORTHO05D007367 3.3e-51 206.5 325 43.1
QL04p010195 Quercus lobata HOM05D002214 ORTHO05D007367 3.3e-51 206.5 339 44.2
Ah.16g100650 Amaranthus hybridus HOM05D002214 ORTHO05D007367 4.3e-51 206.1 261 47.5
CAN.G909.6 Capsicum annuum HOM05D002214 ORTHO05D007367 4.3e-51 206.1 320 44.1
ECA236G0637 Erigeron canadensis HOM05D002214 ORTHO05D001664 4.3e-51 206.1 333 41.1
CSS0000146 Camellia sinensis var. sinensis HOM05D002214 ORTHO05D007367 5.6e-51 205.7 322 40.4
ATR0782G063 Amborella trichopoda HOM05D002214 ORTHO05D007367 2.8e-50 203.4 307 41.4
Dinv07431 Davidia involucrata HOM05D002214 ORTHO05D005113 1.4e-49 201.1 227 51.1
QL04p010068 Quercus lobata HOM05D002214 ORTHO05D007367 2.4e-49 200.3 257 49.4
PSO339G3363 Papaver somniferum HOM05D002214 ORTHO05D007367 3.1e-49 199.9 321 43.0
Cc02_g28820 Coffea canephora HOM05D002214 ORTHO05D007367 1.0e-47 194.9 404 34.4
PSO384G3385 Papaver somniferum HOM05D002214 ORTHO05D007367 1.7e-47 194.1 324 42.6
PGR031G3638 Punica granatum HOM05D002214 ORTHO05D007367 1.7e-47 194.1 360 39.7
Atru.chr11.2515 Acer truncatum HOM05D002214 ORTHO05D007367 8.4e-47 191.8 312 41.7
unitig_22.g5896 Utricularia gibba HOM05D002214 ORTHO05D007367 1.1e-46 191.4 315 39.7
Zm00001eb091260 Zea mays HOM05D002214 ORTHO05D007367 1.9e-46 190.7 307 39.4
ClCG09G004430 Citrullus lanatus HOM05D002214 ORTHO05D007367 2.5e-46 190.3 245 48.2
FvH4_7g01770 Fragaria vesca HOM05D002214 ORTHO05D007367 2.5e-46 190.3 202 55.4
HanXRQChr04g0119861 Helianthus annuus HOM05D002214 ORTHO05D007367 1.0e-44 184.9 274 42.7
Os11g0182400 Oryza sativa ssp. japonica HOM05D002214 ORTHO05D007367 4.3e-43 179.5 310 38.7
Gohir.D08G163300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 7.4e-43 178.7 213 49.8
MBI03_g28525_MAGBIO Magnolia biondii HOM05D002214 ORTHO05D007367 2.8e-42 176.8 314 38.5
Peaxi162Scf01270g00126 Petunia axillaris HOM05D002214 ORTHO05D007367 3.4e-40 169.9 357 37.8
Nitab4.5_0001244g0060 Nicotiana tabacum HOM05D002214 ORTHO05D007367 4.5e-40 169.5 279 42.3
HPP92_021380 Vanilla planifolia HOM05D002214 ORTHO05D007367 7.6e-40 168.7 311 38.6
SalBow6G2835 Salvia bowleyana HOM05D002214 ORTHO05D007367 8.4e-39 165.2 284 39.1
FAN27G0150 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.9e-38 164.1 118 66.1
Haze_03152 Corylus avellana HOM05D002214 ORTHO05D007367 1.2e-37 161.4 391 34.5
Haze_03149 Corylus avellana HOM05D002214 ORTHO05D007367 6.1e-37 159.1 391 34.3
Aa31LG10G14890 Aethionema arabicum HOM05D002214 ORTHO05D007367 1.5e-35 154.5 240 41.2
Cpa.g.sc125.51 Carica papaya HOM05D002214 ORTHO05D007367 2.5e-35 153.7 236 41.1
EL10Ac2g04369 Beta vulgaris HOM05D002214 ORTHO05D007367 1.6e-34 151.0 313 37.4
QL04p010150 Quercus lobata HOM05D002214 ORTHO05D007367 8.2e-34 148.7 240 44.6
QL04p010120 Quercus lobata HOM05D002214 ORTHO05D007367 2.9e-31 140.2 221 47.1
Nitab4.5_0008942g0050 Nicotiana tabacum HOM05D002214 ORTHO05D007367 2.0e-27 127.5 325 34.2
AUR62009418 Chenopodium quinoa HOM05D002214 ORTHO05D007367 4.5e-24 116.3 306 29.7
FvH4_2g17910 Fragaria vesca HOM05D002214 ORTHO05D007367 3.8e-23 113.2 108 55.6
FAN24G3278 Fragaria x ananassa HOM05D002214 ORTHO05D007367 3.8e-23 113.2 108 55.6
Pp3c8_19810 Physcomitrium patens HOM05D002214 ORTHO05D007367 1.4e-22 111.3 333 27.3
AagrBONN_evm.TU.Sc2ySwM_344.2511 Anthoceros agrestis HOM05D002214 ORTHO05D007367 4.7e-21 106.3 326 29.4
Hund16632 Selenicereus undatus HOM05D002214 ORTHO05D007367 4.7e-21 106.3 170 40.6
SEGI_30351 Sequoiadendron giganteum HOM05D002214 ORTHO05D007367 5.1e-20 102.8 150 40.7
COL.COLO4_12334 Corchorus olitorius HOM05D000031 ORTHO05D000030 7.0e-17 92.4 146 41.1
Thecc.01G405700 Theobroma cacao HOM05D002214 ORTHO05D007367 1.5e-16 91.3 107 48.6
SMO137G0282 Selaginella moellendorffii HOM05D002214 ORTHO05D007367 2.5e-14 84.0 226 31.9
CBR_g46897 Chara braunii HOM05D002214 ORTHO05D007367 7.2e-14 82.4 180 33.3
FAN24G0587 Fragaria x ananassa HOM05D002214 ORTHO05D045595 2.1e-13 80.9 78 59.0
FvH4_2g17920 Fragaria vesca HOM05D002214 ORTHO05D045595 3.0e-12 77.0 81 54.3
MD07G1016900 Malus domestica HOM05D002214 ORTHO05D007367 5.7e-11 72.8 113 43.4
MELO3C023585.2 Cucumis melo HOM05D002214 ORTHO05D007367 7.4e-11 72.4 316 29.1
Thecc.01G405800 Theobroma cacao HOM05D002214 ORTHO05D007367 7.4e-11 72.4 87 47.1
Hma1.2p1_0685F.1_g203250 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 9.1e-09 65.5 108 41.7


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