Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0269591 Rosa chinensis HOM05D005002 ORTHO05D006016 9.3e-72 273.5 142 100.0
FvH4_2g11240 Fragaria vesca HOM05D005002 ORTHO05D006016 2.5e-64 248.8 145 91.7
FAN24G1669 Fragaria x ananassa HOM05D005002 ORTHO05D006016 1.8e-62 242.7 169 80.5
Dinv03972 Davidia involucrata HOM05D005002 ORTHO05D006016 5.7e-61 237.7 142 89.4
CSS0035568 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 1.3e-60 236.5 142 88.7
QL01p029339 Quercus lobata HOM05D005002 ORTHO05D006016 1.3e-60 236.5 138 88.4
Prupe.1G399400 Prunus persica HOM05D005002 ORTHO05D006016 1.6e-60 236.1 144 87.5
Actinidia03570 Actinidia chinensis HOM05D005002 ORTHO05D006016 2.1e-60 235.7 142 87.3
Ciclev10009813m.g Citrus clementina HOM05D005002 ORTHO05D006016 2.8e-60 235.3 150 86.7
CSS0022428 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 3.7e-60 235.0 142 88.0
Duzib168G1293 Durio zibethinus HOM05D005002 ORTHO05D006016 4.8e-60 234.6 142 88.0
Manes.03G005700 Manihot esculenta HOM05D005002 ORTHO05D006016 4.8e-60 234.6 142 85.9
CANSAT25G2804 Cannabis sativa HOM05D005002 ORTHO05D006016 2.4e-59 232.3 137 88.3
Gohir.A07G034400 Gossypium hirsutum HOM05D005002 ORTHO05D006016 2.4e-59 232.3 142 87.3
Gohir.D07G038000 Gossypium hirsutum HOM05D005002 ORTHO05D006016 2.4e-59 232.3 142 87.3
Gorai.001G039800 Gossypium raimondii HOM05D005002 ORTHO05D006016 2.4e-59 232.3 142 87.3
CAN.G566.59 Capsicum annuum HOM05D005002 ORTHO05D006016 3.1e-59 231.9 142 85.9
Dinv03977 Davidia involucrata HOM05D005002 ORTHO05D006016 3.1e-59 231.9 142 86.6
GSVIVG01023467001 Vitis vinifera HOM05D005002 ORTHO05D006016 6.9e-59 230.7 137 89.1
TAR622G0454 Trochodendron aralioides HOM05D005002 ORTHO05D006016 9.0e-59 230.3 142 85.2
MD08G1049200 Malus domestica HOM05D005002 ORTHO05D006016 1.2e-58 229.9 141 85.1
vmacro05092 Vaccinium macrocarpon HOM05D005002 ORTHO05D006016 1.2e-58 229.9 143 86.0
Gohir.A05G062833 Gossypium hirsutum HOM05D005002 ORTHO05D006016 1.5e-58 229.6 142 85.9
Gohir.A05G062900 Gossypium hirsutum HOM05D005002 ORTHO05D006016 1.5e-58 229.6 142 85.9
RcHm_v2.0_Chr2g0161651 Rosa chinensis HOM05D005002 ORTHO05D006016 1.5e-58 229.6 128 91.4
GSVIVG01023464001 Vitis vinifera HOM05D005002 ORTHO05D006016 1.5e-58 229.6 137 87.6
Nitab4.5_0001110g0170 Nicotiana tabacum HOM05D005002 ORTHO05D006016 2.0e-58 229.2 138 86.2
Glyma.18G054400 Glycine max HOM05D005002 ORTHO05D006016 3.4e-58 228.4 137 87.6
Oeu008768.2 Olea europaea HOM05D005002 ORTHO05D006016 3.4e-58 228.4 141 85.1
TWI34G0825 Tripterygium wilfordii HOM05D005002 ORTHO05D006016 3.4e-58 228.4 139 87.1
Gohir.D05G065400 Gossypium hirsutum HOM05D005002 ORTHO05D006016 4.5e-58 228.0 142 85.2
Gorai.009G066200 Gossypium raimondii HOM05D005002 ORTHO05D006016 4.5e-58 228.0 142 85.2
Thecc.09G010700 Theobroma cacao HOM05D005002 ORTHO05D006016 4.5e-58 228.0 142 85.2
CSS0010222 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 5.9e-58 227.6 142 86.6
ClCG08G013890 Citrullus lanatus HOM05D005002 ORTHO05D006016 5.9e-58 227.6 142 86.6
Peaxi162Scf00459g00833 Petunia axillaris HOM05D005002 ORTHO05D006016 7.6e-58 227.3 142 83.1
Rhsim07G0172200 Rhododendron simsii HOM05D001416 ORTHO05D005885 7.6e-58 227.3 137 86.9
PGR044G1228 Punica granatum HOM05D005002 ORTHO05D006016 1.0e-57 226.9 130 89.2
EL10Ac2g02432 Beta vulgaris HOM05D005002 ORTHO05D006016 1.3e-57 226.5 133 86.5
Phvul.008G002400 Phaseolus vulgaris HOM05D005002 ORTHO05D006016 1.3e-57 226.5 137 86.9
Glyma.11G160400 Glycine max HOM05D005002 ORTHO05D006016 1.7e-57 226.1 137 86.1
Solyc12g096470.2 Solanum lycopersicum HOM05D005002 ORTHO05D006016 2.2e-57 225.7 139 83.5
Sopen12g032300 Solanum pennellii HOM05D005002 ORTHO05D006016 2.2e-57 225.7 139 83.5
PGSC0003DMG400029278 Solanum tuberosum HOM05D005002 ORTHO05D006016 2.2e-57 225.7 139 83.5
Cc00_g22050 Coffea canephora HOM05D005002 ORTHO05D006016 3.8e-57 224.9 136 85.3
VMungo1383G3578 Vigna mungo HOM05D005002 ORTHO05D006016 5.0e-57 224.6 137 86.1
VMungo1383G2539 Vigna mungo HOM05D005002 ORTHO05D006016 6.5e-57 224.2 137 86.1
Lalb_Chr10g0091021 Lupinus albus HOM05D005002 ORTHO05D006016 1.1e-56 223.4 138 84.8
QL02p017669 Quercus lobata HOM05D005002 ORTHO05D006016 2.5e-56 222.2 137 83.2
Sed0003546 Sechium edule HOM05D005002 ORTHO05D006016 2.5e-56 222.2 137 84.7
Nn3g17630 Nelumbo nucifera HOM05D005002 ORTHO05D006016 3.2e-56 221.9 138 85.5
Lj1g0025268 Lotus japonicus HOM05D005002 ORTHO05D006016 4.2e-56 221.5 133 86.5
Lalb_Chr08g0234011 Lupinus albus HOM05D005002 ORTHO05D006016 4.2e-56 221.5 142 83.8
Sed0020410 Sechium edule HOM05D005002 ORTHO05D006016 7.2e-56 220.7 142 83.1
Medtr7g080740 Medicago truncatula HOM05D005002 ORTHO05D006016 9.3e-56 220.3 142 83.1
TWI63G0754 Tripterygium wilfordii HOM05D005002 ORTHO05D006016 9.3e-56 220.3 164 74.4
Potri.018G013300 Populus trichocarpa HOM05D005002 ORTHO05D006016 1.6e-55 219.5 123 91.9
MSTRG.25811 Avicennia marina HOM05D005002 ORTHO05D006016 2.1e-55 219.2 130 86.9
Psat0s2083g0280 Pisum sativum HOM05D005002 ORTHO05D006016 3.6e-55 218.4 142 81.7
Sabra18G0017200 Salix brachista HOM05D005002 ORTHO05D006016 3.6e-55 218.4 123 91.1
Migut.A00405 Erythranthe guttata HOM05D005002 ORTHO05D006016 6.1e-55 217.6 133 82.7
arahy.Tifrunner.gnm1.ann1.1V29TX Arachis hypogaea HOM05D005002 ORTHO05D006016 1.0e-54 216.9 138 81.9
BcaNung05179 Brassica carinata HOM05D005002 ORTHO05D006016 1.0e-54 216.9 142 83.1
AL7G20310 Arabidopsis lyrata HOM05D005002 ORTHO05D006016 1.8e-54 216.1 142 83.1
Eucgr.B03202 Eucalyptus grandis HOM05D005002 ORTHO05D006016 1.8e-54 216.1 133 82.7
Sp7g29520 Schrenkiella parvula HOM05D005002 ORTHO05D006016 1.8e-54 216.1 142 83.1
TPR.G12644 Trifolium pratense HOM05D005002 ORTHO05D006016 1.8e-54 216.1 142 77.5
AT4G31720 Arabidopsis thaliana HOM05D005002 ORTHO05D006016 2.3e-54 215.7 142 82.4
BraA08t33811Z Brassica rapa HOM05D005002 ORTHO05D006016 3.9e-54 214.9 142 83.1
BcaC09g51961 Brassica carinata HOM05D005002 ORTHO05D006016 5.1e-54 214.5 142 81.7
C01p07220 Brassica napus HOM05D005002 ORTHO05D006016 5.1e-54 214.5 142 81.7
BolC1t00713H Brassica oleracea HOM05D005002 ORTHO05D006016 5.1e-54 214.5 142 81.7
A01p06560 Brassica napus HOM05D005002 ORTHO05D006016 6.7e-54 214.2 142 81.7
BraA01t00615Z Brassica rapa HOM05D005002 ORTHO05D006016 6.7e-54 214.2 142 81.7
Carub.0007s0884 Capsella rubella HOM05D005002 ORTHO05D006016 6.7e-54 214.2 142 81.7
HanXRQChr07g0195931 Helianthus annuus HOM05D005002 ORTHO05D006016 2.5e-53 212.2 142 79.6
Sc23g0006270 Simmondsia chinensis HOM05D005002 ORTHO05D006016 3.3e-53 211.8 128 82.0
arahy.Tifrunner.gnm1.ann1.JDP7FN Arachis hypogaea HOM05D005002 ORTHO05D006016 5.7e-53 211.1 145 77.9
A08p18490 Brassica napus HOM05D005002 ORTHO05D006016 7.4e-53 210.7 142 81.0
HanXRQChr14g0453401 Helianthus annuus HOM05D005002 ORTHO05D006016 7.4e-53 210.7 142 78.2
TPR.G15628 Trifolium pratense HOM05D005002 ORTHO05D006016 7.4e-53 210.7 144 77.1
Aa31LG2G18620 Aethionema arabicum HOM05D005002 ORTHO05D006016 9.7e-53 210.3 134 82.1
Thhalv10026546m.g Eutrema salsugineum HOM05D005002 ORTHO05D006016 9.7e-53 210.3 142 79.6
THA.LOC104819944 Tarenaya hassleriana HOM05D005002 ORTHO05D006016 9.7e-53 210.3 142 80.3
PSO478G2205 Papaver somniferum HOM05D005002 ORTHO05D006016 1.3e-52 209.9 141 81.6
PSO782G1729 Papaver somniferum HOM05D005002 ORTHO05D006016 1.3e-52 209.9 141 81.6
Lsat_1_v5_gn_6_32161 Lactuca sativa HOM05D005002 ORTHO05D006016 2.8e-52 208.8 142 76.8
BcaB03g12714 Brassica carinata HOM05D005002 ORTHO05D006016 4.8e-52 208.0 142 81.0
ECA238G2697 Erigeron canadensis HOM05D005002 ORTHO05D006016 4.8e-52 208.0 142 76.1
unitig_92.g28144 Utricularia gibba HOM05D003482 ORTHO05D004194 6.3e-52 207.6 142 77.5
THA.LOC104803866 Tarenaya hassleriana HOM05D005002 ORTHO05D006016 1.4e-51 206.5 142 79.6
DCAR_020711 Daucus carota HOM05D004285 ORTHO05D006016 1.8e-51 206.1 128 84.4
Aqoxy7G00066 Aquilegia oxysepala HOM05D005002 ORTHO05D006016 4.1e-51 204.9 123 83.7
DCAR_020712 Daucus carota HOM05D005002 ORTHO05D006016 4.1e-51 204.9 127 85.0
MD15G1045700 Malus domestica HOM05D005002 ORTHO05D006016 4.1e-51 204.9 141 77.3
FAN15G1411 Fragaria x ananassa HOM05D000348 ORTHO05D000244 5.9e-50 201.1 106 98.1
Cfa017847 Carpinus fangiana HOM05D005002 ORTHO05D006016 1.7e-49 199.5 142 78.9
CDE04G1191 Ceratophyllum demersum HOM05D005002 ORTHO05D006016 2.9e-49 198.7 132 76.5
ATR0691G047 Amborella trichopoda HOM05D005002 ORTHO05D006016 3.8e-49 198.4 132 76.5
HPP92_000490 Vanilla planifolia HOM05D005002 ORTHO05D006016 1.1e-48 196.8 132 76.5
BcaC01g01070 Brassica carinata HOM05D005002 ORTHO05D006016 9.4e-48 193.7 130 82.3
C03p87650 Brassica napus HOM05D005002 ORTHO05D006016 9.4e-48 193.7 130 82.3
Os09g0431500 Oryza sativa ssp. japonica HOM05D005002 ORTHO05D006016 7.9e-47 190.7 129 73.6
CSS0031521 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 3.9e-46 188.3 115 89.6
Zm00001eb313590 Zea mays HOM05D005002 ORTHO05D006016 6.7e-46 187.6 124 73.4
Actinidia14152 Actinidia chinensis HOM05D005002 ORTHO05D006016 2.0e-45 186.0 115 87.0
Hma1.2p1_0192F.1_g083460 Hydrangea macrophylla HOM05D005002 ORTHO05D006016 7.4e-45 184.1 107 91.6
AUR62037698 Chenopodium quinoa HOM05D005002 ORTHO05D006016 9.7e-45 183.7 115 84.3
MELO3C011321.2 Cucumis melo HOM05D005002 ORTHO05D006016 2.8e-44 182.2 120 85.0
AUR62020301 Chenopodium quinoa HOM05D005002 ORTHO05D006016 6.3e-44 181.0 112 84.8
Haze_18362 Corylus avellana HOM05D005002 ORTHO05D006016 1.1e-43 180.3 115 86.1
Ah.09g224730 Amaranthus hybridus HOM05D005002 ORTHO05D006016 2.2e-41 172.6 145 66.9
BcaC09g51955 Brassica carinata HOM05D005002 ORTHO05D006016 1.1e-40 170.2 132 72.7
SalBow4G2991 Salvia bowleyana HOM05D005002 ORTHO05D006016 1.9e-40 169.5 107 86.0
Ca_06528_v3 Cicer arietinum L. HOM05D005002 ORTHO05D006016 1.2e-39 166.8 115 81.7
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 1.8e-38 162.9 107 78.5
BolC3t21083H Brassica oleracea HOM05D000888 ORTHO05D000740 6.7e-38 161.0 115 80.0
Mapoly0011s0105 Marchantia polymorpha HOM05D005002 ORTHO05D006016 1.3e-36 156.8 122 68.0
Pp3c6_16040 Physcomitrium patens HOM05D005002 ORTHO05D006016 2.4e-35 152.5 115 65.2
RcHm_v2.0_Chr2g0161711 Rosa chinensis HOM05D005002 ORTHO05D006016 4.1e-35 151.8 84 95.2
unitig_93.g30701 Utricularia gibba HOM05D005002 ORTHO05D006016 1.6e-34 149.8 142 62.0
COL.COLO4_21113 Corchorus olitorius HOM05D005002 ORTHO05D006016 2.6e-34 149.1 98 77.6
Duzib168G1591 Durio zibethinus HOM05D005002 ORTHO05D006016 4.5e-34 148.3 84 92.9
BcaC09g51957 Brassica carinata HOM05D005002 ORTHO05D006016 1.0e-33 147.1 145 64.8
COL.COLO4_19003 Corchorus olitorius HOM05D005002 ORTHO05D006016 1.3e-33 146.7 85 89.4
Lju41A41T35 Lonicera japonica HOM05D005002 ORTHO05D006016 2.1e-31 139.4 183 49.2
MSTRG.9875 Avicennia marina HOM05D005002 ORTHO05D006016 8.0e-31 137.5 84 85.7
Duzib187G1493 Durio zibethinus HOM05D005002 ORTHO05D006016 2.6e-29 132.5 86 82.6
CARHR239610 Cardamine hirsuta HOM05D005002 ORTHO05D006016 1.3e-28 130.2 84 84.5
MBI15_g18374_MAGBIO Magnolia biondii HOM05D005002 ORTHO05D006016 3.1e-27 125.6 133 59.4
CBR_g30254 Chara braunii HOM05D005002 ORTHO05D006016 2.0e-26 122.9 104 56.7
Aqoxy7G00833 Aquilegia oxysepala HOM05D005002 ORTHO05D006016 4.5e-26 121.7 79 82.3
SMO141G0065 Selaginella moellendorffii HOM05D005002 ORTHO05D006016 6.5e-25 117.9 120 57.5
Duzib150G1286 Durio zibethinus HOM05D005002 ORTHO05D006016 5.5e-24 114.8 105 65.7
SMO356G0735 Selaginella moellendorffii HOM05D005002 ORTHO05D006016 3.6e-23 112.1 111 52.3
Nitab4.5_0000668g0030 Nicotiana tabacum HOM05D005002 ORTHO05D006016 4.7e-23 111.7 64 85.9
SGA_v2.0_scaffold193G40677 Striga asiatica HOM05D005002 ORTHO05D006016 2.3e-22 109.4 94 64.9
Lalb_Chr08g0233981 Lupinus albus HOM05D005002 ORTHO05D006016 2.0e-21 106.3 65 80.0
FAN27G2219 Fragaria x ananassa HOM05D005002 ORTHO05D006016 1.7e-20 103.2 61 86.9
FAN20G1660 Fragaria x ananassa HOM05D005002 ORTHO05D006016 2.0e-18 96.3 61 82.0
PRCOL_00006189 Prasinoderma coloniale HOM05D005002 ORTHO05D006016 4.5e-18 95.1 121 42.1
Lalb_Chr08g0233961 Lupinus albus HOM05D005002 ORTHO05D006016 1.0e-17 94.0 58 86.2
QL12p013723 Quercus lobata HOM05D005002 ORTHO05D006016 6.5e-17 91.3 60 81.7
SEGI_02469 Sequoiadendron giganteum HOM05D005002 ORTHO05D006016 8.6e-17 90.9 62 75.8
CiPaw.15G092700 Carya illinoinensis HOM05D005002 ORTHO05D006016 2.5e-16 89.4 58 79.3
COL.COLO4_27723 Corchorus olitorius HOM05D005002 ORTHO05D006016 4.2e-16 88.6 58 74.1
MCO01G145 Micromonas commoda HOM05D005002 ORTHO05D006016 5.2e-14 81.6 124 39.5
Phvul.009G222000 Phaseolus vulgaris HOM05D005002 ORTHO05D006016 2.6e-13 79.3 77 59.7
EL10Ac5g10893 Beta vulgaris HOM05D005002 ORTHO05D006016 4.4e-13 78.6 46 84.8
Actinidia25736 Actinidia chinensis HOM05D005002 ORTHO05D006016 2.0e-10 69.7 84 51.2
Cre16.g657000 Chlamydomonas reinhardtii HOM05D005002 ORTHO05D006016 1.3e-09 67.0 136 34.6
HanXRQChr14g0435251 Helianthus annuus HOM05D005002 ORTHO05D006016 9.5e-08 60.8 57 61.4
SEGI_34318 Sequoiadendron giganteum HOM05D005002 ORTHO05D006016 8.0e-07 57.8 41 70.7


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