Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0268191 Rosa chinensis HOM05D006271 ORTHO05D008237 1.7e-159 566.2 345 100.0
FAN13G0829 Fragaria x ananassa HOM05D006271 ORTHO05D008237 3.2e-126 455.7 337 84.3
FAN18G4385 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.2e-125 453.8 337 84.0
FAN04G1993 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.8e-124 449.9 366 77.9
FAN08G2456 Fragaria x ananassa HOM05D006271 ORTHO05D008237 2.0e-120 436.4 366 77.3
FvH4_5g27270 Fragaria vesca HOM05D006271 ORTHO05D008237 6.8e-92 341.7 211 86.3
MD11G1060500 Malus domestica HOM05D006271 ORTHO05D008237 3.4e-91 339.3 292 65.8
MD03G1058300 Malus domestica HOM05D006271 ORTHO05D008237 7.5e-91 338.2 300 65.3
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 3.5e-88 329.3 292 63.4
Prupe.6G045300 Prunus persica HOM05D006271 ORTHO05D008237 5.9e-88 328.6 293 66.2
Cfa011797 Carpinus fangiana HOM05D006271 ORTHO05D008237 1.0e-87 327.8 292 63.7
CiPaw.13G067000 Carya illinoinensis HOM05D006271 ORTHO05D008237 8.0e-85 318.2 292 61.0
Ciclev10001595m.g Citrus clementina HOM05D006271 ORTHO05D008237 5.2e-84 315.5 284 64.4
Atru.chr5.2170 Acer truncatum HOM05D006271 ORTHO05D008237 2.2e-82 310.1 277 62.1
TWI79G1094 Tripterygium wilfordii HOM05D006271 ORTHO05D008237 6.3e-82 308.5 287 61.0
GSVIVG01024608001 Vitis vinifera HOM05D006271 ORTHO05D008237 1.8e-81 307.0 288 62.2
ClCG08G003170 Citrullus lanatus HOM05D006271 ORTHO05D008237 1.0e-79 301.2 294 58.2
Cpa.g.c32708 Carica papaya HOM05D006271 ORTHO05D008237 1.7e-79 300.4 291 59.5
CsaV3_7G022840 Cucumis sativus L. HOM05D006271 ORTHO05D008237 2.9e-79 299.7 293 58.4
CANSAT11G2184 Cannabis sativa HOM05D006271 ORTHO05D008237 1.5e-78 297.4 286 60.8
arahy.Tifrunner.gnm1.ann1.4PY88X Arachis hypogaea HOM05D006271 ORTHO05D008237 5.6e-78 295.4 282 59.9
Eucgr.K01366 Eucalyptus grandis HOM05D006271 ORTHO05D008237 7.3e-78 295.0 288 58.3
arahy.Tifrunner.gnm1.ann1.0DE1FL Arachis hypogaea HOM05D006271 ORTHO05D008237 1.2e-77 294.3 292 58.9
Glyma.19G024000 Glycine max HOM05D006271 ORTHO05D008237 4.7e-77 292.4 289 59.5
TAR369G0029 Trochodendron aralioides HOM05D006271 ORTHO05D008237 1.4e-76 290.8 292 58.9
Duzib168G1576 Durio zibethinus HOM05D006271 ORTHO05D008237 2.3e-76 290.0 293 58.7
THA.LOC104800763 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 8.9e-76 288.1 290 56.6
Ca_26670_v3 Cicer arietinum L. HOM05D006271 ORTHO05D008237 7.5e-75 285.0 289 57.1
Medtr7g033700 Medicago truncatula HOM05D006271 ORTHO05D008237 2.2e-74 283.5 290 55.9
Sc21g0004890 Simmondsia chinensis HOM05D006271 ORTHO05D008237 2.4e-73 280.0 293 55.6
Hma1.2p1_0613F.1_g189190 Hydrangea macrophylla HOM05D006271 ORTHO05D008237 7.0e-73 278.5 297 57.2
Potri.019G126500 Populus trichocarpa HOM05D006271 ORTHO05D008237 1.2e-72 277.7 299 54.2
Sabra19G0124300 Salix brachista HOM05D006271 ORTHO05D008237 1.2e-72 277.7 303 54.5
CSS0050408 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 1.6e-72 277.3 295 55.6
Lsat_1_v5_gn_9_14460 Lactuca sativa HOM05D006271 ORTHO05D008237 1.6e-72 277.3 289 56.1
Cc01_g15040 Coffea canephora HOM05D006271 ORTHO05D008237 2.0e-72 276.9 291 56.7
Aa31LG5G6440 Aethionema arabicum HOM05D006271 ORTHO05D008237 2.7e-72 276.6 273 59.3
Phvul.008G153700 Phaseolus vulgaris HOM05D006271 ORTHO05D008237 2.7e-72 276.6 272 57.4
Thhalv10016851m.g Eutrema salsugineum HOM05D006271 ORTHO05D008237 1.0e-71 274.6 291 56.7
Carub.0008s0813 Capsella rubella HOM05D006271 ORTHO05D008237 1.7e-71 273.9 292 56.2
Oeu032478.1 Olea europaea HOM05D006271 ORTHO05D008237 3.0e-71 273.1 303 53.5
Sabra19G0130300 Salix brachista HOM05D006271 ORTHO05D008237 3.0e-71 273.1 297 54.9
Nitab4.5_0003270g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 5.0e-71 272.3 291 57.7
BraA05t20437Z Brassica rapa HOM05D006271 ORTHO05D008237 8.6e-71 271.6 289 56.1
Sp4g12860 Schrenkiella parvula HOM05D006271 ORTHO05D008237 1.5e-70 270.8 291 56.0
Aqoxy4G02154 Aquilegia oxysepala HOM05D006271 ORTHO05D008237 1.9e-70 270.4 287 55.1
VMungo0464G0054 Vigna mungo HOM05D006271 ORTHO05D008237 1.9e-70 270.4 273 56.8
A05p15180 Brassica napus HOM05D006271 ORTHO05D008237 5.6e-70 268.9 288 56.6
HanXRQChr08g0228551 Helianthus annuus HOM05D006271 ORTHO05D008237 5.6e-70 268.9 294 54.8
AL4G25130 Arabidopsis lyrata HOM05D006271 ORTHO05D008237 7.3e-70 268.5 291 55.7
Lalb_Chr22g0360771 Lupinus albus HOM05D006271 ORTHO05D008237 9.5e-70 268.1 273 56.0
COL.COLO4_11178 Corchorus olitorius HOM05D006271 ORTHO05D008237 2.1e-69 266.9 287 56.4
Gorai.003G151300 Gossypium raimondii HOM05D006271 ORTHO05D008237 2.1e-69 266.9 274 58.8
Sopen06g033780 Solanum pennellii HOM05D006271 ORTHO05D008237 2.8e-69 266.5 291 55.3
TAR633G1937 Trochodendron aralioides HOM05D006271 ORTHO05D008237 4.7e-69 265.8 306 52.9
Medtr8g063090 Medicago truncatula HOM05D006271 ORTHO05D008237 8.0e-69 265.0 268 56.3
Manes.12G056300 Manihot esculenta HOM05D006271 ORTHO05D008237 1.1e-68 264.6 292 55.1
Thecc.09G360000 Theobroma cacao HOM05D006271 ORTHO05D008237 1.1e-68 264.6 289 56.1
AT2G30280 Arabidopsis thaliana HOM05D006271 ORTHO05D008237 1.4e-68 264.2 285 55.4
Rhsim13G0062500 Rhododendron simsii HOM05D006271 ORTHO05D008237 1.4e-68 264.2 292 55.8
Psat6g224880 Pisum sativum HOM05D006271 ORTHO05D008237 1.8e-68 263.8 285 54.7
CSS0007493 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 3.1e-68 263.1 280 55.4
Gohir.D03G144000 Gossypium hirsutum HOM05D006271 ORTHO05D008237 4.0e-68 262.7 270 58.9
TPR.G1139 Trifolium pratense HOM05D006271 ORTHO05D008237 6.8e-68 261.9 265 56.2
DCAR_018792 Daucus carota HOM05D006271 ORTHO05D008237 8.9e-68 261.5 288 53.5
Nitab4.5_0002768g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 1.2e-67 261.2 291 56.4
CARHR123600 Cardamine hirsuta HOM05D006271 ORTHO05D008237 1.5e-67 260.8 293 53.6
Sed0013584 Sechium edule HOM05D006271 ORTHO05D008237 4.4e-67 259.2 282 55.0
QL01p025615 Quercus lobata HOM05D006271 ORTHO05D008237 5.8e-67 258.8 498 38.4
CAN.G1095.29 Capsicum annuum HOM05D006271 ORTHO05D008237 1.7e-66 257.3 290 53.8
BcaB02g10312 Brassica carinata HOM05D006271 ORTHO05D008237 2.2e-66 256.9 278 55.4
Gohir.A03G024500 Gossypium hirsutum HOM05D006271 ORTHO05D008237 2.9e-66 256.5 270 57.8
PGSC0003DMG400030380 Solanum tuberosum HOM05D006271 ORTHO05D008237 4.1e-65 252.7 306 52.3
SGA_v2.0_scaffold77G25374 Striga asiatica HOM05D006271 ORTHO05D008237 4.1e-65 252.7 251 57.4
PGR004G1333 Punica granatum HOM05D006271 ORTHO05D008237 5.4e-65 252.3 273 55.3
ECA247G1693 Erigeron canadensis HOM05D006271 ORTHO05D008237 1.2e-64 251.1 274 55.1
Hund18965 Selenicereus undatus HOM05D006271 ORTHO05D008237 1.6e-64 250.8 285 51.6
EL10Ac7g15870 Beta vulgaris HOM05D006271 ORTHO05D008237 2.7e-64 250.0 297 50.5
Lj1g0015465 Lotus japonicus HOM05D006271 ORTHO05D008237 3.5e-64 249.6 272 54.4
BcaC02g11116 Brassica carinata HOM05D006271 ORTHO05D008237 4.6e-64 249.2 269 55.0
BolC4t23562H Brassica oleracea HOM05D006271 ORTHO05D008237 2.5e-62 243.4 277 53.8
PSO170G5827 Papaver somniferum HOM05D006271 ORTHO05D008237 5.6e-62 242.3 288 49.7
MBI15_g26246_MAGBIO Magnolia biondii HOM05D006271 ORTHO05D008237 1.6e-61 240.7 287 51.2
PSO017G5241 Papaver somniferum HOM05D006271 ORTHO05D008237 2.8e-61 240.0 288 49.3
Medtr7g033685 Medicago truncatula HOM05D006271 ORTHO05D008237 9.9e-59 231.5 273 50.9
Dinv12252 Davidia involucrata HOM05D006271 ORTHO05D008237 6.4e-58 228.8 218 59.2
CSS0039557 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 1.9e-57 227.3 293 50.2
THA.LOC104800777 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 2.1e-56 223.8 290 50.3
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 3.5e-56 223.0 290 50.3
unitig_60.g25562 Utricularia gibba HOM05D006271 ORTHO05D008237 3.5e-56 223.0 275 49.5
Actinidia23186 Actinidia chinensis HOM05D006271 ORTHO05D008237 4.6e-56 222.6 288 50.0
SalBow2G1290 Salvia bowleyana HOM05D006271 ORTHO05D008237 3.9e-55 219.5 330 43.3
vmacro02904 Vaccinium macrocarpon HOM05D006271 ORTHO05D008237 2.8e-53 213.4 291 48.8
Lj1g0018317 Lotus japonicus HOM05D006271 ORTHO05D008237 6.2e-53 212.2 344 41.9
C04p20240 Brassica napus HOM05D006271 ORTHO05D008237 4.0e-52 209.5 239 54.0
Migut.N00750 Erythranthe guttata HOM05D006271 ORTHO05D008237 1.2e-51 208.0 284 46.1
Peaxi162Scf00390g00528 Petunia axillaris HOM05D006271 ORTHO05D008237 2.6e-51 206.8 290 46.9
Os12g0110300 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 4.4e-51 206.1 296 44.9
Os11g0110066 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 3.8e-50 203.0 284 45.1
QL01p025639 Quercus lobata HOM05D006271 ORTHO05D008237 1.3e-47 194.5 156 66.7
HPP92_015428 Vanilla planifolia HOM05D006271 ORTHO05D008237 1.3e-47 194.5 275 43.6
PSO339G2991 Papaver somniferum HOM05D006271 ORTHO05D008237 2.3e-47 193.7 337 39.8
AUR62036230 Chenopodium quinoa HOM05D006271 ORTHO05D008237 3.0e-47 193.4 244 46.7
Dinv44551 Davidia involucrata HOM05D006271 ORTHO05D008237 1.1e-46 191.4 173 61.3
AUR62009716 Chenopodium quinoa HOM05D006271 ORTHO05D008237 1.6e-45 187.6 301 42.9
Nn2g11075 Nelumbo nucifera HOM05D006271 ORTHO05D008237 1.5e-43 181.0 201 55.2
TPR.G1080 Trifolium pratense HOM05D006271 ORTHO05D008237 4.9e-42 176.0 255 44.3
CDE04G1879 Ceratophyllum demersum HOM05D006271 ORTHO05D008237 1.7e-39 167.5 225 45.3
Ah.07g202380 Amaranthus hybridus HOM05D006271 ORTHO05D008237 2.0e-35 154.1 219 46.6
SEGI_17267 Sequoiadendron giganteum HOM05D006271 ORTHO05D008237 3.2e-33 146.7 259 37.8
unitig_60.g25741 Utricularia gibba HOM05D006271 ORTHO05D008237 5.6e-30 136.0 247 34.4
Zm00001eb404980 Zea mays HOM05D006271 ORTHO05D008237 1.2e-27 128.3 187 42.8
AagrBONN_evm.TU.Sc2ySwM_344.4002 Anthoceros agrestis HOM05D006271 ORTHO05D008237 2.0e-27 127.5 297 36.7
Pp3c12_13690 Physcomitrium patens HOM05D006271 ORTHO05D008237 9.3e-25 118.6 274 33.2
SHI19233 Sapria himalayana HOM05D006271 ORTHO05D008237 1.0e-23 115.2 181 43.6
PSO384G0354 Papaver somniferum HOM05D006271 ORTHO05D008237 2.6e-19 100.5 98 56.1
Ah.07g202370 Amaranthus hybridus HOM05D006271 ORTHO05D000898 1.4e-17 94.7 93 57.0
Mapoly0055s0007 Marchantia polymorpha HOM05D006271 ORTHO05D008237 1.6e-16 91.3 288 32.6
BcaB06g28355 Brassica carinata HOM05D006271 ORTHO05D008237 1.3e-13 81.6 101 49.5
BolC4t27428H Brassica oleracea HOM05D006271 ORTHO05D023853 1.7e-10 71.2 202 36.1
C04p59170 Brassica napus HOM05D006271 ORTHO05D023853 1.4e-09 68.2 203 35.5
PSO170G2099 Papaver somniferum HOM05D006271 ORTHO05D008237 1.5e-06 58.2 221 31.7


User provided reference genes

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