Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0252011 Rosa chinensis HOM05D032211 ORTHO05D035840 4.0e-204 714.5 356 100.0
FAN24G0997 Fragaria x ananassa HOM05D032211 ORTHO05D035840 8.1e-32 142.1 124 52.4
Manes.04G154600 Manihot esculenta HOM05D002835 ORTHO05D003008 7.9e-11 72.4 105 36.2
Sabra03G0140800 Salix brachista HOM05D002835 ORTHO05D003008 1.0e-10 72.0 107 33.6
Lsat_1_v5_gn_7_12560 Lactuca sativa HOM05D002835 ORTHO05D003008 1.8e-10 71.2 113 35.4
SMO011G0037 Selaginella moellendorffii HOM05D002835 ORTHO05D003008 5.1e-10 69.7 149 30.2
CDE02G2097 Ceratophyllum demersum HOM05D002835 ORTHO05D003008 8.7e-10 68.9 118 32.2
Cpa.g.sc73.6 Carica papaya HOM05D002835 ORTHO05D003008 1.1e-09 68.6 158 28.5
Potri.003G191100 Populus trichocarpa HOM05D002835 ORTHO05D003008 2.5e-09 67.4 105 33.3
Atru.chr12.1228 Acer truncatum HOM05D002835 ORTHO05D003008 4.3e-09 66.6 117 31.6
Dinv31525 Davidia involucrata HOM05D002835 ORTHO05D003008 4.3e-09 66.6 155 29.7
Potri.001G034200 Populus trichocarpa HOM05D002835 ORTHO05D003008 4.3e-09 66.6 105 33.3
Sabra01G0024300 Salix brachista HOM05D002835 ORTHO05D003008 4.3e-09 66.6 105 34.3
CSS0008682 Camellia sinensis var. sinensis HOM05D002835 ORTHO05D003008 5.7e-09 66.2 121 31.4
CDE08G0623 Ceratophyllum demersum HOM05D002835 ORTHO05D003008 5.7e-09 66.2 116 31.0
CAN.G1099.6 Capsicum annuum HOM05D002835 ORTHO05D003008 9.6e-09 65.5 154 31.2
ECA236G0686 Erigeron canadensis HOM05D002835 ORTHO05D003008 9.6e-09 65.5 121 32.2
Sed0003493 Sechium edule HOM05D002835 ORTHO05D003008 2.1e-08 64.3 105 33.3
Solyc10g085590.1 Solanum lycopersicum HOM05D002835 ORTHO05D003008 2.1e-08 64.3 133 32.3
CiPaw.13G017600 Carya illinoinensis HOM05D002835 ORTHO05D003008 2.8e-08 63.9 138 30.4
Mapoly0030s0083 Marchantia polymorpha HOM05D002835 ORTHO05D003008 2.8e-08 63.9 110 34.5
Rhsim07G0071800 Rhododendron simsii HOM05D002835 ORTHO05D003008 2.8e-08 63.9 123 29.3
PGSC0003DMG400008386 Solanum tuberosum HOM05D002835 ORTHO05D003008 3.7e-08 63.5 133 31.6
DCAR_001965 Daucus carota HOM05D002835 ORTHO05D003008 4.8e-08 63.2 149 30.9
HanXRQChr12g0383231 Helianthus annuus HOM05D002835 ORTHO05D003008 4.8e-08 63.2 158 29.1
Sopen10g035000 Solanum pennellii HOM05D002835 ORTHO05D003008 4.8e-08 63.2 133 31.6
Cpa.g.sc33.161 Carica papaya HOM05D002835 ORTHO05D003008 6.3e-08 62.8 113 31.0
HanXRQChr01g0028021 Helianthus annuus HOM05D002835 ORTHO05D003008 6.3e-08 62.8 105 33.3
Prupe.8G144500 Prunus persica HOM05D002835 ORTHO05D003008 6.3e-08 62.8 127 37.0
FAN24G2104 Fragaria x ananassa HOM05D032211 ORTHO05D035840 8.2e-08 62.4 141 31.2
Nitab4.5_0000381g0320 Nicotiana tabacum HOM05D002835 ORTHO05D003008 8.2e-08 62.4 107 30.8
CBR_g25956 Chara braunii HOM05D002835 ORTHO05D003008 1.8e-07 61.2 167 28.7
Nitab4.5_0005447g0040 Nicotiana tabacum HOM05D002835 ORTHO05D003008 1.8e-07 61.2 108 32.4
CARHR086930 Cardamine hirsuta HOM05D002835 ORTHO05D003008 2.4e-07 60.8 164 29.9
Lj9C650T3 Lonicera japonica HOM05D002835 ORTHO05D003008 2.4e-07 60.8 105 33.3
Peaxi162Scf00068g01814 Petunia axillaris HOM05D002835 ORTHO05D003008 2.4e-07 60.8 107 30.8
Peaxi162Scf00146g00068 Petunia axillaris HOM05D002835 ORTHO05D003008 2.4e-07 60.8 100 33.0
Nn3g19475 Nelumbo nucifera HOM05D002835 ORTHO05D003008 4.1e-07 60.1 100 35.0
TAR362G0971 Trochodendron aralioides HOM05D002835 ORTHO05D003008 5.3e-07 59.7 99 33.3
AL6G24500 Arabidopsis lyrata HOM05D002835 ORTHO05D003008 9.0e-07 58.9 164 29.3
Gohir.A06G173500 Gossypium hirsutum HOM05D002835 ORTHO05D003008 9.0e-07 58.9 166 30.7
Dinv31988 Davidia involucrata HOM05D002835 ORTHO05D003008 1.2e-06 58.5 77 33.8
Gorai.010G214500 Gossypium raimondii HOM05D002835 ORTHO05D003008 1.2e-06 58.5 166 30.7
Actinidia01694 Actinidia chinensis HOM05D002835 ORTHO05D003008 1.5e-06 58.2 138 29.0
Gohir.D06G183500 Gossypium hirsutum HOM05D002835 ORTHO05D003008 1.5e-06 58.2 166 30.7
Nn3g19474 Nelumbo nucifera HOM05D002835 ORTHO05D003008 1.5e-06 58.2 98 34.7
TAR362G0691 Trochodendron aralioides HOM05D002835 ORTHO05D003008 1.5e-06 58.2 99 33.3
AL3G24060 Arabidopsis lyrata HOM05D002835 ORTHO05D003008 2.6e-06 57.4 131 32.1
Thhalv10022018m.g Eutrema salsugineum HOM05D002835 ORTHO05D003008 5.9e-06 56.2 131 32.1
Oeu039033.2 Olea europaea HOM05D002835 ORTHO05D003008 5.9e-06 56.2 113 29.2
Ciclev10001331m.g Citrus clementina HOM05D002835 ORTHO05D003008 1.0e-05 55.5 164 29.3
COL.COLO4_05752 Corchorus olitorius HOM05D002835 ORTHO05D003008 1.0e-05 55.5 164 29.9
Oeu009488.1 Olea europaea HOM05D002835 ORTHO05D003008 1.0e-05 55.5 138 27.5


User provided reference genes

Program Settings