Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0082351 Rosa chinensis HOM05D001506 ORTHO05D000455 4.3e-66 255.4 235 100.0
RcHm_v2.0_Chr5g0082011 Rosa chinensis HOM05D001506 ORTHO05D000455 2.1e-28 130.2 252 71.8
FAN25G3207 Fragaria x ananassa HOM05D001506 ORTHO05D000455 3.3e-21 106.3 205 38.5
RcHm_v2.0_Chr5g0081651 Rosa chinensis HOM05D001506 ORTHO05D000455 4.0e-19 99.4 253 68.0
RcHm_v2.0_Chr5g0082381 Rosa chinensis HOM05D001506 ORTHO05D000455 1.5e-18 97.4 181 86.2
RcHm_v2.0_Chr5g0082221 Rosa chinensis HOM05D001506 ORTHO05D000455 3.7e-17 92.8 253 67.6
RcHm_v2.0_Chr5g0082511 Rosa chinensis HOM05D001506 ORTHO05D000455 4.9e-17 92.4 256 67.6
Prupe.6G116800 Prunus persica HOM05D001506 ORTHO05D000455 1.4e-16 90.9 252 55.2
RcHm_v2.0_Chr5g0082311 Rosa chinensis HOM05D001506 ORTHO05D000455 1.8e-16 90.5 253 67.6
RcHm_v2.0_Chr5g0082281 Rosa chinensis HOM05D001506 ORTHO05D000455 2.4e-16 90.1 252 67.1
RcHm_v2.0_Chr5g0081771 Rosa chinensis HOM05D001506 ORTHO05D000455 5.4e-16 89.0 252 67.1
FAN16G3133 Fragaria x ananassa HOM05D001506 ORTHO05D000455 3.9e-14 82.8 89 56.2
RcHm_v2.0_Chr5g0082581 Rosa chinensis HOM05D001506 ORTHO05D000455 5.0e-14 82.4 103 49.5
RcHm_v2.0_Chr5g0082571 Rosa chinensis HOM05D001506 ORTHO05D000455 6.6e-14 82.0 87 54.0
RcHm_v2.0_Chr5g0082761 Rosa chinensis HOM05D001506 ORTHO05D000455 1.1e-13 81.3 251 66.1
RcHm_v2.0_Chr5g0082191 Rosa chinensis HOM05D001506 ORTHO05D000455 1.5e-13 80.9 216 60.6
FvH4_3g38570 Fragaria vesca HOM05D001506 ORTHO05D000455 1.9e-13 80.5 205 75.6
RcHm_v2.0_Chr5g0082491 Rosa chinensis HOM05D001506 ORTHO05D000455 3.3e-13 79.7 79 59.5
RcHm_v2.0_Chr3g0460851 Rosa chinensis HOM05D001506 ORTHO05D000455 2.8e-12 76.6 252 65.1
MD00G1077300 Malus domestica HOM05D001506 ORTHO05D000455 3.6e-12 76.3 248 64.1
RcHm_v2.0_Chr5g0081811 Rosa chinensis HOM05D001506 ORTHO05D000455 3.6e-12 76.3 85 56.5
FAN11G1337 Fragaria x ananassa HOM05D001506 ORTHO05D000455 4.7e-12 75.9 205 74.6
MD00G1077400 Malus domestica HOM05D001506 ORTHO05D000455 8.0e-12 75.1 248 64.5
RcHm_v2.0_Chr5g0082791 Rosa chinensis HOM05D001506 ORTHO05D000455 8.0e-12 75.1 237 67.5
RcHm_v2.0_Chr4g0401291 Rosa chinensis HOM05D001506 ORTHO05D000455 1.0e-11 74.7 251 61.4
RcHm_v2.0_Chr6g0254081 Rosa chinensis HOM05D001506 ORTHO05D000455 1.4e-11 74.3 252 61.9
RcHm_v2.0_Chr5g0082401 Rosa chinensis HOM05D001506 ORTHO05D000455 2.3e-11 73.6 205 74.1
FAN21G2324 Fragaria x ananassa HOM05D001506 ORTHO05D000455 3.1e-11 73.2 197 31.0
RcHm_v2.0_Chr5g0081721 Rosa chinensis HOM05D001506 ORTHO05D000455 3.1e-11 73.2 242 66.5
RcHm_v2.0_Chr5g0082911 Rosa chinensis HOM05D001506 ORTHO05D000455 5.2e-11 72.4 236 66.9
RcHm_v2.0_Chr5g0081711 Rosa chinensis HOM05D001506 ORTHO05D000455 8.9e-11 71.6 105 42.9
RcHm_v2.0_Chr4g0401451 Rosa chinensis HOM05D001506 ORTHO05D000455 1.2e-10 71.2 87 46.0
RcHm_v2.0_Chr5g0081631 Rosa chinensis HOM05D001506 ORTHO05D000455 2.0e-10 70.5 104 42.3
RcHm_v2.0_Chr1g0324181 Rosa chinensis HOM05D001506 ORTHO05D000455 2.6e-10 70.1 252 63.1
RcHm_v2.0_Chr5g0082161 Rosa chinensis HOM05D001506 ORTHO05D000455 2.6e-10 70.1 205 73.7
Prupe.4G246600 Prunus persica HOM05D001506 ORTHO05D000455 5.8e-10 68.9 104 42.3
Prupe.6G009600 Prunus persica HOM05D001506 ORTHO05D000455 7.5e-10 68.6 177 31.1
FvH4_3g45260 Fragaria vesca HOM05D001506 ORTHO05D000455 1.3e-09 67.8 205 72.2
RcHm_v2.0_Chr1g0324201 Rosa chinensis HOM05D001506 ORTHO05D000455 1.3e-09 67.8 103 41.7
MD03G1243900 Malus domestica HOM05D001506 ORTHO05D000455 2.9e-09 66.6 247 64.4
RcHm_v2.0_Chr5g0048661 Rosa chinensis HOM05D001506 ORTHO05D000455 2.9e-09 66.6 104 39.4
Prupe.4G162600 Prunus persica HOM05D001506 ORTHO05D000455 3.7e-09 66.2 204 54.4
RcHm_v2.0_Chr5g0081991 Rosa chinensis HOM05D001506 ORTHO05D000455 4.9e-09 65.9 205 72.7
MD03G1227100 Malus domestica HOM05D001506 ORTHO05D000455 8.3e-09 65.1 103 38.8
RcHm_v2.0_Chr5g0082131 Rosa chinensis HOM05D001506 ORTHO05D000455 1.4e-08 64.3 45 73.3
RcHm_v2.0_Chr5g0082241 Rosa chinensis HOM05D001506 ORTHO05D000455 1.4e-08 64.3 45 73.3
RcHm_v2.0_Chr5g0081891 Rosa chinensis HOM05D001506 ORTHO05D000455 2.4e-08 63.5 45 73.3
FAN20G2034 Fragaria x ananassa HOM05D001506 ORTHO05D000455 3.2e-08 63.2 205 41.5
Prupe.6G009700 Prunus persica HOM05D001506 ORTHO05D000455 3.2e-08 63.2 104 39.4
RcHm_v2.0_Chr5g0082091 Rosa chinensis HOM05D001506 ORTHO05D000455 3.2e-08 63.2 87 43.7
RcHm_v2.0_Chr5g0083581 Rosa chinensis HOM05D001506 ORTHO05D000455 3.2e-08 63.2 205 67.3
RcHm_v2.0_Chr6g0288571 Rosa chinensis HOM05D001506 ORTHO05D000455 3.2e-08 63.2 86 43.0
MD03G1240600 Malus domestica HOM05D001506 ORTHO05D000455 4.1e-08 62.8 103 36.9
RcHm_v2.0_Chr5g0081871 Rosa chinensis HOM05D001506 ORTHO05D000455 4.1e-08 62.8 206 72.8
FAN25G0304 Fragaria x ananassa HOM05D001506 ORTHO05D000455 5.4e-08 62.4 126 34.9
FAN21G2161 Fragaria x ananassa HOM05D001506 ORTHO05D000455 7.0e-08 62.0 180 55.0
RcHm_v2.0_Chr1g0325621 Rosa chinensis HOM05D001506 ORTHO05D000455 7.0e-08 62.0 83 43.4
RcHm_v2.0_Chr5g0081581 Rosa chinensis HOM05D001506 ORTHO05D000455 9.2e-08 61.6 205 69.8
FAN16G1850 Fragaria x ananassa HOM05D001506 ORTHO05D000455 1.2e-07 61.2 203 55.2
Ciclev10003246m.g Citrus clementina HOM05D001506 ORTHO05D000455 1.6e-07 60.8 56 48.2
FAN25G2167 Fragaria x ananassa HOM05D001506 ORTHO05D000455 2.7e-07 60.1 86 76.7
Prupe.4G169300 Prunus persica HOM05D001506 ORTHO05D000455 2.7e-07 60.1 104 39.4
RcHm_v2.0_Chr5g0070971 Rosa chinensis HOM05D001506 ORTHO05D000455 3.5e-07 59.7 103 36.9
FAN21G0398 Fragaria x ananassa HOM05D001506 ORTHO05D000455 6.0e-07 58.9 83 42.2
Prupe.4G163000 Prunus persica HOM05D001506 ORTHO05D000455 6.0e-07 58.9 83 44.6
RcHm_v2.0_Chr4g0401571 Rosa chinensis HOM05D001506 ORTHO05D000455 6.0e-07 58.9 104 34.6
RcHm_v2.0_Chr5g0070981 Rosa chinensis HOM05D001506 ORTHO05D000455 6.0e-07 58.9 204 71.1
RcHm_v2.0_Chr5g0082641 Rosa chinensis HOM05D001506 ORTHO05D000455 1.0e-06 58.2 205 71.7
FAN11G0839 Fragaria x ananassa HOM05D001506 ORTHO05D000455 1.3e-06 57.8 103 68.0
Prupe.4G162000 Prunus persica HOM05D001506 ORTHO05D000455 3.0e-06 56.6 44 63.6
FAN21G2334 Fragaria x ananassa HOM05D001506 ORTHO05D000455 3.9e-06 56.2 42 66.7
RcHm_v2.0_Chr5g0082711 Rosa chinensis HOM05D001506 ORTHO05D000455 3.9e-06 56.2 45 64.4
FAN21G0463 Fragaria x ananassa HOM05D001506 ORTHO05D000455 5.0e-06 55.8 86 73.3
MD11G1248700 Malus domestica HOM05D001506 ORTHO05D000455 6.6e-06 55.5 84 44.0
FvH4_3g44872 Fragaria vesca HOM05D001506 ORTHO05D000455 8.6e-06 55.1 29 82.8
MD03G1017400 Malus domestica HOM05D001506 ORTHO05D000455 8.6e-06 55.1 205 25.4


User provided reference genes

Program Settings