Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0065021 Rosa chinensis HOM05D006330 ORTHO05D008013 3.0e-37 157.9 75 100.0
FvH4_2g17480 Fragaria vesca HOM05D006330 ORTHO05D008013 4.4e-12 74.3 46 78.3
RcHm_v2.0_Chr6g0282221 Rosa chinensis HOM05D006330 ORTHO05D008013 4.4e-12 74.3 46 78.3
Oeu049580.1 Olea europaea HOM05D006330 ORTHO05D008013 7.5e-12 73.6 69 58.0
FAN24G2605 Fragaria x ananassa HOM05D006330 ORTHO05D008013 1.3e-11 72.8 46 76.1
FAN15G1514 Fragaria x ananassa HOM05D006330 ORTHO05D008013 1.7e-11 72.4 46 76.1
Lj2C1112G6 Lonicera japonica HOM05D006330 ORTHO05D008013 4.8e-11 70.9 46 76.1
PSO675G8411 Papaver somniferum HOM05D006330 ORTHO05D008013 6.3e-11 70.5 45 75.6
PGR044G2230 Punica granatum HOM05D006330 ORTHO05D008013 6.3e-11 70.5 46 76.1
Gohir.D11G150300 Gossypium hirsutum HOM05D006330 ORTHO05D008013 8.3e-11 70.1 46 76.1
Gorai.007G161200 Gossypium raimondii HOM05D006330 ORTHO05D008013 8.3e-11 70.1 46 76.1
Nn7g37444 Nelumbo nucifera HOM05D006330 ORTHO05D008013 1.1e-10 69.7 46 71.7
TWI36G1481 Tripterygium wilfordii HOM05D006330 ORTHO05D008013 1.1e-10 69.7 46 73.9
Aqoxy2G02383 Aquilegia oxysepala HOM05D006330 ORTHO05D008013 1.4e-10 69.3 46 71.7
PSO675G8704 Papaver somniferum HOM05D006330 ORTHO05D008013 1.4e-10 69.3 45 73.3
CiPaw.13G055600 Carya illinoinensis HOM05D006330 ORTHO05D008013 1.8e-10 68.9 46 71.7
Haze_03505 Corylus avellana HOM05D006330 ORTHO05D008013 1.8e-10 68.9 46 71.7
Dinv28793 Davidia involucrata HOM05D006330 ORTHO05D008013 1.8e-10 68.9 46 71.7
MBI10_g35385_MAGBIO Magnolia biondii HOM05D006330 ORTHO05D008013 1.8e-10 68.9 46 71.7
Sabra14G0134300 Salix brachista HOM05D006330 ORTHO05D008013 1.8e-10 68.9 46 71.7
CSS0004044 Camellia sinensis var. sinensis HOM05D006330 ORTHO05D008013 2.4e-10 68.6 45 73.3
Cfa010572 Carpinus fangiana HOM05D006330 ORTHO05D008013 2.4e-10 68.6 46 71.7
MD10G1148200 Malus domestica HOM05D006330 ORTHO05D008013 2.4e-10 68.6 46 71.7
QL09p047707 Quercus lobata HOM05D006330 ORTHO05D008013 2.4e-10 68.6 46 71.7
GSVIVG01001532001 Vitis vinifera HOM05D006330 ORTHO05D008013 2.4e-10 68.6 46 71.7
Prupe.8G187200 Prunus persica HOM05D006330 ORTHO05D008013 3.1e-10 68.2 46 69.6
CANSAT01G2136 Cannabis sativa HOM05D006330 ORTHO05D008013 4.1e-10 67.8 46 69.6
Ciclev10015989m.g Citrus clementina HOM05D006330 ORTHO05D008013 4.1e-10 67.8 45 73.3
TAR362G0826 Trochodendron aralioides HOM05D006330 ORTHO05D008013 4.1e-10 67.8 46 69.6
Zm00001eb168340 Zea mays HOM05D006330 ORTHO05D008013 4.1e-10 67.8 45 71.1
Potri.014G175500 Populus trichocarpa HOM05D006330 ORTHO05D008013 5.3e-10 67.4 46 69.6
Sc05g0001630 Simmondsia chinensis HOM05D006330 ORTHO05D008013 5.3e-10 67.4 46 71.7
EL10Ac5g10587 Beta vulgaris HOM05D006330 ORTHO05D008013 7.0e-10 67.0 46 69.6
ClCG09G008360 Citrullus lanatus HOM05D006330 ORTHO05D008013 7.0e-10 67.0 46 69.6
Cc01_g15880 Coffea canephora HOM05D006330 ORTHO05D008013 7.0e-10 67.0 46 71.7
Os11g0247400 Oryza sativa ssp. japonica HOM05D006330 ORTHO05D008013 7.0e-10 67.0 45 71.1
Phvul.010G036400 Phaseolus vulgaris HOM05D006330 ORTHO05D008013 7.0e-10 67.0 46 69.6
SGA_v2.0_scaffold231G43447 Striga asiatica HOM05D006330 ORTHO05D008013 7.0e-10 67.0 46 67.4
Thecc.01G207700 Theobroma cacao HOM05D006330 ORTHO05D008013 7.0e-10 67.0 46 69.6
VMungo0331G1131 Vigna mungo HOM05D006330 ORTHO05D008013 7.0e-10 67.0 46 69.6
AUR62008069 Chenopodium quinoa HOM05D006330 ORTHO05D008013 9.1e-10 66.6 45 71.1
DCAR_004774 Daucus carota HOM05D006330 ORTHO05D008013 9.1e-10 66.6 46 65.2
HPP92_007591 Vanilla planifolia HOM05D006330 ORTHO05D008013 9.1e-10 66.6 45 68.9
MSTRG.21296 Avicennia marina HOM05D006330 ORTHO05D008013 1.2e-09 66.2 46 67.4
CDE02G1604 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 1.2e-09 66.2 45 71.1
Gohir.A11G143900 Gossypium hirsutum HOM05D006330 ORTHO05D008013 1.2e-09 66.2 45 73.3
Manes.12G055500 Manihot esculenta HOM05D006330 ORTHO05D008013 1.2e-09 66.2 46 69.6
Nitab4.5_0000038g0340 Nicotiana tabacum HOM05D006330 ORTHO05D008013 1.2e-09 66.2 43 74.4
Nitab4.5_0010469g0010 Nicotiana tabacum HOM05D006330 ORTHO05D008013 1.2e-09 66.2 43 74.4
ATR0743G141 Amborella trichopoda HOM05D006330 ORTHO05D008013 1.6e-09 65.9 48 68.8
Glyma.03G097100 Glycine max HOM05D006330 ORTHO05D008013 1.6e-09 65.9 46 67.4
Glyma.07G124200 Glycine max HOM05D006330 ORTHO05D008013 1.6e-09 65.9 46 67.4
Psat4g208240 Pisum sativum HOM05D006330 ORTHO05D008013 1.6e-09 65.9 46 69.6
Sed0009827 Sechium edule HOM05D006330 ORTHO05D008013 1.6e-09 65.9 45 73.3
Actinidia34530 Actinidia chinensis HOM05D006330 ORTHO05D008013 2.0e-09 65.5 46 69.6
Duzib133G1456 Durio zibethinus HOM05D006330 ORTHO05D008013 2.0e-09 65.5 46 67.4
Actinidia23802 Actinidia chinensis HOM05D006330 ORTHO05D008013 2.7e-09 65.1 46 67.4
arahy.Tifrunner.gnm1.ann1.84ZR2Z Arachis hypogaea HOM05D006330 ORTHO05D008013 2.7e-09 65.1 46 67.4
Rhsim01G0247700 Rhododendron simsii HOM05D006330 ORTHO05D008013 2.7e-09 65.1 48 62.5
arahy.Tifrunner.gnm1.ann1.3RIK1P Arachis hypogaea HOM05D006330 ORTHO05D008013 3.5e-09 64.7 46 69.6
Ca_23158_v3 Cicer arietinum L. HOM05D006330 ORTHO05D008013 3.5e-09 64.7 46 67.4
Ciclev10018050m.g Citrus clementina HOM05D006330 ORTHO05D008013 3.5e-09 64.7 45 68.9
MELO3C021126.2 Cucumis melo HOM05D006330 ORTHO05D008013 4.5e-09 64.3 46 65.2
CsaV3_7G026730 Cucumis sativus L. HOM05D006330 ORTHO05D008013 4.5e-09 64.3 46 65.2
Peaxi162Scf00841g00112 Petunia axillaris HOM05D006330 ORTHO05D008013 4.5e-09 64.3 45 68.9
Solyc09g047870.4 Solanum lycopersicum HOM05D006330 ORTHO05D008013 4.5e-09 64.3 45 68.9
Sopen09g015980 Solanum pennellii HOM05D006330 ORTHO05D008013 4.5e-09 64.3 45 68.9
vmacro14689 Vaccinium macrocarpon HOM05D006330 ORTHO05D008013 4.5e-09 64.3 45 68.9
Eucgr.K02361 Eucalyptus grandis HOM05D006330 ORTHO05D008013 5.9e-09 63.9 46 69.6
TPR.G17377 Trifolium pratense HOM05D006330 ORTHO05D008013 5.9e-09 63.9 46 67.4
Migut.D00775 Erythranthe guttata HOM05D006330 ORTHO05D008013 7.7e-09 63.5 45 68.9
Lsat_1_v5_gn_9_16880 Lactuca sativa HOM05D006330 ORTHO05D008013 7.7e-09 63.5 46 65.2
Lj3g0006219 Lotus japonicus HOM05D006330 ORTHO05D008013 7.7e-09 63.5 46 69.6
Atru.chr6.3528 Acer truncatum HOM05D006330 ORTHO05D008013 1.0e-08 63.2 45 68.9
Lalb_Chr12g0210221 Lupinus albus HOM05D006330 ORTHO05D008013 1.0e-08 63.2 46 67.4
ECA247G1307 Erigeron canadensis HOM05D006330 ORTHO05D008013 1.3e-08 62.8 46 65.2
THA.LOC104804704 Tarenaya hassleriana HOM05D006330 ORTHO05D008013 1.3e-08 62.8 46 67.4
SalBow3G0290 Salvia bowleyana HOM05D006330 ORTHO05D008013 2.2e-08 62.0 42 69.0
HanXRQChr07g0190561 Helianthus annuus HOM05D006330 ORTHO05D008013 6.5e-08 60.5 43 65.1
Aa31sc18G40 Aethionema arabicum HOM05D006330 ORTHO05D008013 1.1e-07 59.7 46 60.9
BcaB08g34453 Brassica carinata HOM05D006330 ORTHO05D008013 2.5e-07 58.5 46 63.0
BcaC01g03225 Brassica carinata HOM05D006330 ORTHO05D008013 2.5e-07 58.5 46 63.0
A03p44190 Brassica napus HOM05D006330 ORTHO05D008013 2.5e-07 58.5 46 63.0
C03p54570 Brassica napus HOM05D006330 ORTHO05D008013 2.5e-07 58.5 46 63.0
BolC3t17744H Brassica oleracea HOM05D006330 ORTHO05D008013 2.5e-07 58.5 46 63.0
BraA03t13548Z Brassica rapa HOM05D006330 ORTHO05D008013 2.5e-07 58.5 46 63.0
Thhalv10002617m.g Eutrema salsugineum HOM05D006330 ORTHO05D008013 2.5e-07 58.5 46 63.0
Medtr8g010130 Medicago truncatula HOM05D006330 ORTHO05D008013 2.5e-07 58.5 46 63.0
Sp3g22990 Schrenkiella parvula HOM05D006330 ORTHO05D008013 2.5e-07 58.5 46 63.0
CARHR101770 Cardamine hirsuta HOM05D006330 ORTHO05D008013 3.2e-07 58.2 46 60.9
BcaC06g35817 Brassica carinata HOM05D006330 ORTHO05D008013 9.4e-07 56.6 46 60.9
A07p06930 Brassica napus HOM05D006330 ORTHO05D008013 9.4e-07 56.6 46 60.9
C07p10530 Brassica napus HOM05D006330 ORTHO05D008013 9.4e-07 56.6 46 60.9
BolC7t41520H Brassica oleracea HOM05D006330 ORTHO05D008013 9.4e-07 56.6 46 60.9
BraA07t28484Z Brassica rapa HOM05D006330 ORTHO05D008013 9.4e-07 56.6 46 60.9
Carub.0003s2579 Capsella rubella HOM05D006330 ORTHO05D008013 9.4e-07 56.6 46 58.7
BcaB06g26747 Brassica carinata HOM05D006330 ORTHO05D008013 1.2e-06 56.2 46 60.9
Mapoly0006s0124 Marchantia polymorpha HOM05D006330 ORTHO05D008013 2.7e-06 55.1 48 58.3
AagrBONN_evm.TU.Sc2ySwM_368.2380 Anthoceros agrestis HOM05D006330 ORTHO05D008013 3.6e-06 54.7 45 60.0
Hma1.2p1_0161F.1_g071650 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 3.6e-06 54.7 46 58.7
SEGI_37995 Sequoiadendron giganteum HOM05D006330 ORTHO05D008013 3.6e-06 54.7 43 60.5


User provided reference genes

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