Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0052621 Rosa chinensis HOM05D001678 ORTHO05D001698 6.7e-27 123.2 61 100.0
RcHm_v2.0_Chr6g0281401 Rosa chinensis HOM05D001678 ORTHO05D001698 1.5e-26 122.1 61 98.4
RcHm_v2.0_Chr4g0395221 Rosa chinensis HOM05D001678 ORTHO05D001698 3.7e-25 117.5 61 95.1
RcHm_v2.0_Chr4g0409291 Rosa chinensis HOM05D001678 ORTHO05D001698 8.7e-19 96.3 48 97.9
FAN08G3647 Fragaria x ananassa HOM05D001678 ORTHO05D001698 3.2e-13 77.8 59 64.4
FvH4_6g24700 Fragaria vesca HOM05D001678 ORTHO05D001698 5.5e-13 77.0 59 62.7
FvH4_5g24690 Fragaria vesca HOM05D001678 ORTHO05D001698 1.4e-11 72.4 52 67.3
FvH4_2g33311 Fragaria vesca HOM05D001678 ORTHO05D001698 1.8e-11 72.0 51 68.6
FAN08G2072 Fragaria x ananassa HOM05D001678 ORTHO05D001698 4.4e-10 67.4 52 63.5
FAN24G2506 Fragaria x ananassa HOM05D001678 ORTHO05D001698 4.4e-10 67.4 50 66.0
FAN10G0526 Fragaria x ananassa HOM05D001678 ORTHO05D001698 7.4e-10 66.6 50 66.0
Prupe.8G061600 Prunus persica HOM05D001678 ORTHO05D001698 1.3e-09 65.9 58 53.4
RcHm_v2.0_Chr5g0008231 Rosa chinensis HOM05D001678 ORTHO05D001698 6.3e-09 63.5 58 55.2
Lj2A433T12 Lonicera japonica HOM05D001678 ORTHO05D001698 1.1e-08 62.8 54 53.7
FvH4_4g17330 Fragaria vesca HOM05D001678 ORTHO05D001698 1.8e-08 62.0 57 50.9
Glyma.08G208800 Glycine max HOM05D001678 ORTHO05D001698 5.3e-08 60.5 64 50.0
Glyma.10G211500 Glycine max HOM05D001678 ORTHO05D001698 6.9e-08 60.1 64 51.6
Glyma.18G175000 Glycine max HOM05D001678 ORTHO05D001698 6.9e-08 60.1 64 51.6
Glyma.20G169100 Glycine max HOM05D001678 ORTHO05D001698 6.9e-08 60.1 64 51.6
Glyma.01G110000 Glycine max HOM05D001678 ORTHO05D001698 9.1e-08 59.7 64 50.0
Glyma.01G126100 Glycine max HOM05D001678 ORTHO05D001698 9.1e-08 59.7 64 50.0
Glyma.06G095100 Glycine max HOM05D001678 ORTHO05D001698 9.1e-08 59.7 64 50.0
Glyma.06G182400 Glycine max HOM05D001678 ORTHO05D001698 9.1e-08 59.7 64 50.0
Glyma.07G133600 Glycine max HOM05D001678 ORTHO05D001698 9.1e-08 59.7 64 50.0
Glyma.08G218300 Glycine max HOM05D001678 ORTHO05D001698 9.1e-08 59.7 64 50.0
Glyma.10G128600 Glycine max HOM05D001678 ORTHO05D001698 9.1e-08 59.7 64 50.0
Glyma.10G293700 Glycine max HOM05D001678 ORTHO05D001698 9.1e-08 59.7 64 50.0
Glyma.11G167500 Glycine max HOM05D001678 ORTHO05D001698 9.1e-08 59.7 64 50.0
Glyma.12G113000 Glycine max HOM05D001678 ORTHO05D001698 9.1e-08 59.7 64 50.0
Glyma.14G191800 Glycine max HOM05D001678 ORTHO05D001698 9.1e-08 59.7 64 50.0
Glyma.14G219200 Glycine max HOM05D001678 ORTHO05D001698 9.1e-08 59.7 64 50.0
Glyma.19G032300 Glycine max HOM05D001678 ORTHO05D001698 9.1e-08 59.7 64 50.0
Glyma.17G148300 Glycine max HOM05D001678 ORTHO05D001698 1.2e-07 59.3 64 50.0
Lj3C1037T5 Lonicera japonica HOM05D001678 ORTHO05D001698 1.2e-07 59.3 58 50.0
Lj6A398T11 Lonicera japonica HOM05D001678 ORTHO05D001698 1.2e-07 59.3 58 50.0
Prupe.1G130600 Prunus persica HOM05D001678 ORTHO05D001698 1.2e-07 59.3 54 50.0
Glyma.10G131100 Glycine max HOM05D001678 ORTHO05D001698 1.5e-07 58.9 64 50.0
Glyma.15G150600 Glycine max HOM05D001678 ORTHO05D001698 1.5e-07 58.9 64 50.0
Oeu029512.1 Olea europaea HOM05D001678 ORTHO05D001698 2.0e-07 58.5 57 49.1
Prupe.3G105400 Prunus persica HOM05D001678 ORTHO05D001698 2.6e-07 58.2 60 48.3
Prupe.7G010100 Prunus persica HOM05D001678 ORTHO05D001698 2.6e-07 58.2 50 54.0
RcHm_v2.0_Chr3g0476481 Rosa chinensis HOM05D001678 ORTHO05D001698 2.6e-07 58.2 61 49.2
Glyma.10G200900 Glycine max HOM05D001678 ORTHO05D001698 3.4e-07 57.8 64 48.4
SGA_v2.0_scaffold25G11062 Striga asiatica HOM05D001678 ORTHO05D001698 3.4e-07 57.8 57 49.1
Prupe.1G170700 Prunus persica HOM05D001678 ORTHO05D001698 4.5e-07 57.4 57 49.1
Prupe.4G168300 Prunus persica HOM05D001678 ORTHO05D001698 4.5e-07 57.4 57 49.1
Prupe.5G010600 Prunus persica HOM05D001678 ORTHO05D001698 5.9e-07 57.0 50 52.0
Glyma.01G111800 Glycine max HOM05D001678 ORTHO05D001698 7.7e-07 56.6 64 48.4
Glyma.13G184400 Glycine max HOM05D001678 ORTHO05D001698 7.7e-07 56.6 64 48.4
Glyma.17G190600 Glycine max HOM05D001678 ORTHO05D001698 1.0e-06 56.2 68 45.6
Atru.chr13.2422 Acer truncatum HOM05D001678 ORTHO05D001698 1.3e-06 55.8 61 47.5
Oeu035952.1 Olea europaea HOM05D001678 ORTHO05D001698 1.3e-06 55.8 57 49.1
TPR.G8361 Trifolium pratense HOM05D001678 ORTHO05D001698 1.3e-06 55.8 64 46.9
Atru.chr12.2214 Acer truncatum HOM05D001678 ORTHO05D001698 1.7e-06 55.5 50 48.0
FAN14G3339 Fragaria x ananassa HOM05D001678 ORTHO05D001698 1.7e-06 55.5 58 51.7
Medtr3g097540 Medicago truncatula HOM05D001678 ORTHO05D001698 1.7e-06 55.5 60 43.3
Prupe.6G133700 Prunus persica HOM05D001678 ORTHO05D001698 1.7e-06 55.5 50 50.0
FvH4_6g20420 Fragaria vesca HOM05D000034 ORTHO05D001698 2.9e-06 54.7 55 52.7
FAN26G1383 Fragaria x ananassa HOM05D001678 ORTHO05D001698 3.8e-06 54.3 45 55.6
Oeu004532.1 Olea europaea HOM05D001678 ORTHO05D001698 3.8e-06 54.3 57 49.1
Prupe.1G177900 Prunus persica HOM05D001678 ORTHO05D001698 3.8e-06 54.3 64 46.9
SGA_v2.0_scaffold2614G54162 Striga asiatica HOM05D001678 ORTHO05D001698 3.8e-06 54.3 57 45.6
SGA_v2.0_scaffold27G11443 Striga asiatica HOM05D001678 ORTHO05D001698 3.8e-06 54.3 57 45.6
SGA_v2.0_scaffold68G22889 Striga asiatica HOM05D001678 ORTHO05D001698 3.8e-06 54.3 57 45.6
SGA_v2.0_scaffold68G22949 Striga asiatica HOM05D001678 ORTHO05D001698 3.8e-06 54.3 57 47.4
Atru.chr9.929 Acer truncatum HOM05D001678 ORTHO05D001698 5.0e-06 53.9 49 49.0
SGA_v2.0_scaffold296G47542 Striga asiatica HOM05D001678 ORTHO05D001698 5.0e-06 53.9 57 45.6
FvH4_3g09360 Fragaria vesca HOM05D002475 ORTHO05D002710 6.5e-06 53.5 58 48.3
Medtr1g106600 Medicago truncatula HOM05D001678 ORTHO05D001698 6.5e-06 53.5 60 43.3
Medtr1g106608 Medicago truncatula HOM05D001678 ORTHO05D001698 6.5e-06 53.5 60 43.3
Medtr6g018520 Medicago truncatula HOM05D001678 ORTHO05D001698 6.5e-06 53.5 60 43.3
Medtr6g025650 Medicago truncatula HOM05D001678 ORTHO05D001698 6.5e-06 53.5 60 43.3
DCAR_002869 Daucus carota HOM05D001678 ORTHO05D001698 8.5e-06 53.1 55 49.1


User provided reference genes

Program Settings