Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0026921 Rosa chinensis HOM05D006918 ORTHO05D008525 3.5e-61 240.4 119 100.0
FvH4_3g15990 Fragaria vesca HOM05D006918 ORTHO05D008525 1.8e-57 228.0 118 94.9
FAN11G3197 Fragaria x ananassa HOM05D006918 ORTHO05D008525 1.8e-57 228.0 118 94.9
FAN21G2086 Fragaria x ananassa HOM05D006918 ORTHO05D008525 1.8e-57 228.0 118 94.9
FAN21G2559 Fragaria x ananassa HOM05D006918 ORTHO05D008525 1.8e-57 228.0 118 94.9
FAN25G3485 Fragaria x ananassa HOM05D006918 ORTHO05D008525 1.5e-56 224.9 119 92.4
MD10G1198700 Malus domestica HOM05D006918 ORTHO05D008525 2.0e-48 198.0 120 80.8
Prupe.4G143000 Prunus persica HOM05D006918 ORTHO05D008525 5.4e-46 189.9 120 78.3
MD05G1216400 Malus domestica HOM05D006918 ORTHO05D008525 2.1e-45 188.0 120 76.7
Haze_08532 Corylus avellana HOM05D006918 ORTHO05D008525 6.6e-44 183.0 120 75.8
Cfa019430 Carpinus fangiana HOM05D006918 ORTHO05D008525 8.6e-44 182.6 120 75.8
ClCG11G016340 Citrullus lanatus HOM05D006918 ORTHO05D008525 1.9e-43 181.4 120 73.3
CsaV3_4G031810 Cucumis sativus L. HOM05D006918 ORTHO05D008525 2.8e-42 177.6 119 72.3
Thecc.07G154400 Theobroma cacao HOM05D006918 ORTHO05D008525 2.8e-42 177.6 120 70.0
QL04p074473 Quercus lobata HOM05D006918 ORTHO05D008525 4.7e-42 176.8 121 73.6
CSS0032788 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 8.1e-42 176.0 119 70.6
MELO3C010560.2 Cucumis melo HOM05D006918 ORTHO05D008525 1.1e-41 175.6 119 71.4
CiPaw.12G045100 Carya illinoinensis HOM05D006918 ORTHO05D008525 1.8e-41 174.9 121 74.4
Sed0019951 Sechium edule HOM05D006918 ORTHO05D008525 1.8e-41 174.9 120 71.7
Manes.14G015600 Manihot esculenta HOM05D006918 ORTHO05D008525 1.5e-40 171.8 120 68.3
Dinv19625 Davidia involucrata HOM05D006918 ORTHO05D008525 2.6e-40 171.0 119 68.9
Sabra11G0128500 Salix brachista HOM05D006918 ORTHO05D008525 7.6e-40 169.5 120 67.5
Potri.011G144300 Populus trichocarpa HOM05D006918 ORTHO05D008525 9.9e-40 169.1 120 67.5
CANSAT56G0998 Cannabis sativa HOM05D006918 ORTHO05D008525 6.4e-39 166.4 119 67.2
CSS0007445 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 1.6e-37 161.8 120 64.2
Gohir.D05G330400 Gossypium hirsutum HOM05D006918 ORTHO05D008525 2.1e-37 161.4 120 65.0
Gorai.009G354800 Gossypium raimondii HOM05D006918 ORTHO05D008525 2.1e-37 161.4 120 65.0
Lj3g0009186 Lotus japonicus HOM05D006918 ORTHO05D008525 2.7e-37 161.0 122 66.4
CSS0011318 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 2.3e-36 157.9 120 63.3
Duzib187G0932 Durio zibethinus HOM05D006918 ORTHO05D008525 3.9e-36 157.1 119 63.9
Duzib187G1351 Durio zibethinus HOM05D006918 ORTHO05D008525 3.9e-36 157.1 119 63.9
Glyma.08G172400 Glycine max HOM05D006918 ORTHO05D008525 3.9e-36 157.1 122 63.9
Sabra16G0310000 Salix brachista HOM05D006918 ORTHO05D008525 3.9e-36 157.1 120 60.8
Potri.001G457300 Populus trichocarpa HOM05D006918 ORTHO05D008525 5.1e-36 156.8 120 62.5
Glyma.15G254900 Glycine max HOM05D006918 ORTHO05D008525 8.6e-36 156.0 122 63.9
Sc03g0007940 Simmondsia chinensis HOM05D006918 ORTHO05D008525 1.5e-35 155.2 120 63.3
Phvul.005G056300 Phaseolus vulgaris HOM05D006918 ORTHO05D008525 9.6e-35 152.5 122 62.3
TAR627G0890 Trochodendron aralioides HOM05D006918 ORTHO05D008525 1.2e-34 152.1 112 65.2
Atru.chr12.2189 Acer truncatum HOM05D006918 ORTHO05D008525 4.7e-34 150.2 119 61.3
VMungo1080G0996 Vigna mungo HOM05D006918 ORTHO05D008525 6.8e-33 146.4 122 60.7
Cc05_g15990 Coffea canephora HOM05D006918 ORTHO05D008525 8.9e-33 146.0 120 59.2
Cpa.g.sc10.35 Carica papaya HOM05D006918 ORTHO05D008525 1.5e-32 145.2 121 62.0
EL10Ac4g08564 Beta vulgaris HOM05D006918 ORTHO05D008525 2.0e-32 144.8 113 64.6
Eucgr.F03183 Eucalyptus grandis HOM05D006918 ORTHO05D008525 2.6e-32 144.4 119 57.1
Nn7g37872 Nelumbo nucifera HOM05D006918 ORTHO05D008525 9.9e-32 142.5 120 54.2
DCAR_013746 Daucus carota HOM05D006918 ORTHO05D008525 1.3e-31 142.1 113 61.9
TWI39G1081 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 1.7e-31 141.7 113 61.9
Lalb_Chr01g0007081 Lupinus albus HOM05D006918 ORTHO05D008525 6.4e-31 139.8 122 61.5
Migut.M01563 Erythranthe guttata HOM05D006918 ORTHO05D008525 1.9e-30 138.3 121 57.0
Ah.04g163440 Amaranthus hybridus HOM05D006918 ORTHO05D008525 3.2e-30 137.5 113 62.8
Nitab4.5_0008437g0030 Nicotiana tabacum HOM05D006918 ORTHO05D008525 3.2e-30 137.5 121 57.0
PGSC0003DMG400022129 Solanum tuberosum HOM05D006918 ORTHO05D008525 3.2e-30 137.5 128 53.9
TWI38G1170 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 4.2e-30 137.1 115 59.1
Ca_03688_v3 Cicer arietinum L. HOM05D006918 ORTHO05D008525 9.3e-30 136.0 125 58.4
DCAR_016820 Daucus carota HOM05D006918 ORTHO05D008525 1.2e-29 135.6 119 58.0
Lj5A202T40 Lonicera japonica HOM05D006918 ORTHO05D008525 1.6e-29 135.2 125 57.6
Lalb_Chr25g0285091 Lupinus albus HOM05D006918 ORTHO05D008525 3.5e-29 134.0 119 58.0
PSO675G9078 Papaver somniferum HOM05D006918 ORTHO05D008525 4.6e-29 133.7 117 56.4
Ciclev10019503m.g Citrus clementina HOM05D006918 ORTHO05D008525 1.0e-28 132.5 117 60.7
PSO541G4556 Papaver somniferum HOM05D006918 ORTHO05D008525 1.0e-28 132.5 117 55.6
AUR62044624 Chenopodium quinoa HOM05D006918 ORTHO05D008525 1.7e-28 131.7 113 59.3
Oeu056983.1 Olea europaea HOM05D006918 ORTHO05D008525 2.3e-28 131.3 116 55.2
Medtr2g069680 Medicago truncatula HOM05D006918 ORTHO05D008525 5.1e-28 130.2 126 54.8
AUR62043059 Chenopodium quinoa HOM05D006918 ORTHO05D008525 6.6e-28 129.8 113 58.4
Nitab4.5_0001749g0050 Nicotiana tabacum HOM05D006918 ORTHO05D008525 8.7e-28 129.4 127 52.0
Rhsim04G0005900 Rhododendron simsii HOM05D006918 ORTHO05D008525 8.7e-28 129.4 122 55.7
Solyc07g066390.1 Solanum lycopersicum HOM05D006918 ORTHO05D008525 1.1e-27 129.0 128 52.3
Sopen07g034560 Solanum pennellii HOM05D006918 ORTHO05D008525 1.1e-27 129.0 128 52.3
Peaxi162Scf00452g00086 Petunia axillaris HOM05D006918 ORTHO05D008525 1.9e-27 128.3 128 51.6
Lalb_Chr19g0133401 Lupinus albus HOM05D006918 ORTHO05D008525 2.5e-27 127.9 121 55.4
TPR.G9735 Trifolium pratense HOM05D006918 ORTHO05D008525 5.6e-27 126.7 123 55.3
Aqoxy6G01201 Aquilegia oxysepala HOM05D006918 ORTHO05D008525 1.3e-26 125.6 117 51.3
Lsat_1_v5_gn_7_72161 Lactuca sativa HOM05D006918 ORTHO05D008525 1.1e-25 122.5 118 50.8
THA.LOC104808118 Tarenaya hassleriana HOM05D006918 ORTHO05D008525 1.8e-25 121.7 118 56.8
TPR.G9758 Trifolium pratense HOM05D006918 ORTHO05D008525 2.4e-25 121.3 123 50.4
Psat1g002800 Pisum sativum HOM05D006918 ORTHO05D008525 3.1e-25 120.9 125 54.4
TAR636G1403 Trochodendron aralioides HOM05D006918 ORTHO05D008525 3.1e-25 120.9 99 60.6
MSTRG.7057 Avicennia marina HOM05D006918 ORTHO05D008525 1.2e-24 119.0 115 50.4
CAN.G943.32 Capsicum annuum HOM05D006918 ORTHO05D008525 3.4e-24 117.5 133 48.9
PGR031G3805 Punica granatum HOM05D006918 ORTHO05D008525 3.4e-24 117.5 132 50.0
Lj5C202T5 Lonicera japonica HOM05D006918 ORTHO05D008525 1.7e-23 115.2 127 50.4
Sp5g34130 Schrenkiella parvula HOM05D006918 ORTHO05D008525 8.4e-23 112.8 133 48.9
Thhalv10018334m.g Eutrema salsugineum HOM05D006918 ORTHO05D008525 1.1e-22 112.5 133 48.1
AL2G39540 Arabidopsis lyrata HOM05D006918 ORTHO05D008525 5.4e-22 110.2 132 48.5
TPR.G9740 Trifolium pratense HOM05D006918 ORTHO05D008525 7.1e-22 109.8 117 50.4
AT1G79080 Arabidopsis thaliana HOM05D006918 ORTHO05D008525 1.6e-21 108.6 130 46.2
CARHR072750 Cardamine hirsuta HOM05D006918 ORTHO05D008525 2.7e-21 107.8 135 45.9
Carub.0002s2595 Capsella rubella HOM05D006918 ORTHO05D008525 6.0e-21 106.7 128 47.7
HanXRQChr05g0161001 Helianthus annuus HOM05D006918 ORTHO05D008525 7.9e-21 106.3 120 50.8
Dinv42519 Davidia involucrata HOM05D006918 ORTHO05D008525 1.7e-20 105.1 70 67.1
BcaC08g47472 Brassica carinata HOM05D006918 ORTHO05D008525 2.3e-20 104.8 123 48.0
C06p52950 Brassica napus HOM05D006918 ORTHO05D008525 2.3e-20 104.8 123 48.0
BolC6t40313H Brassica oleracea HOM05D006918 ORTHO05D008525 6.6e-20 103.2 121 47.9
A07p44220 Brassica napus HOM05D006918 ORTHO05D008525 1.1e-19 102.4 99 53.5
BraA07t31930Z Brassica rapa HOM05D006918 ORTHO05D008525 1.5e-19 102.1 99 53.5
Aa31LG4G1910 Aethionema arabicum HOM05D001696 ORTHO05D001746 5.6e-19 100.1 130 46.2
CDE04G0465 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 6.2e-18 96.7 71 56.3
BcaB02g08665 Brassica carinata HOM05D006918 ORTHO05D008525 2.0e-16 91.7 120 44.2
BcaNung04908 Brassica carinata HOM05D006918 ORTHO05D008525 1.7e-15 88.6 96 47.9
SGA_v2.0_scaffold7G03576 Striga asiatica HOM05D006918 ORTHO05D008525 2.9e-15 87.8 83 50.6
HPP92_013983 Vanilla planifolia HOM05D006918 ORTHO05D008525 2.9e-15 87.8 122 41.8
HPP92_013913 Vanilla planifolia HOM05D006918 ORTHO05D008525 1.1e-14 85.9 122 41.0
ATR1098G023 Amborella trichopoda HOM05D006918 ORTHO05D008525 5.8e-08 63.5 41 68.3


User provided reference genes

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