Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0151101 Rosa chinensis HOM05D003469 ORTHO05D004084 0.0e+00 1838.5 959 100.0
RcHm_v2.0_Chr2g0151071 Rosa chinensis HOM05D003469 ORTHO05D004084 0.0e+00 1668.3 922 96.2
FAN02G0848 Fragaria x ananassa HOM05D003469 ORTHO05D004084 0.0e+00 1653.3 922 93.8
FvH4_6g37900 Fragaria vesca HOM05D003469 ORTHO05D004084 0.0e+00 1647.1 922 92.7
FAN09G4617 Fragaria x ananassa HOM05D003469 ORTHO05D004084 0.0e+00 1644.4 922 93.5
FAN14G5376 Fragaria x ananassa HOM05D003469 ORTHO05D004084 0.0e+00 1644.0 922 92.6
Prupe.8G070000 Prunus persica HOM05D003469 ORTHO05D004084 0.0e+00 1225.3 921 71.4
MD09G1155000 Malus domestica HOM05D003469 ORTHO05D004084 0.0e+00 1181.4 923 68.8
CiPaw.03G010300 Carya illinoinensis HOM05D003469 ORTHO05D004084 2.0e-311 1072.4 869 62.9
TAR628G0771 Trochodendron aralioides HOM05D003469 ORTHO05D004084 8.2e-305 1050.4 868 61.5
Thecc.08G168800 Theobroma cacao HOM05D003469 ORTHO05D004084 5.3e-296 1021.1 865 61.0
GSVIVG01036699001 Vitis vinifera HOM05D003469 ORTHO05D004084 4.4e-290 1001.5 906 57.6
RcHm_v2.0_Chr6g0293861 Rosa chinensis HOM05D003469 ORTHO05D004084 1.8e-288 996.1 937 60.3
Actinidia21939 Actinidia chinensis HOM05D003469 ORTHO05D004084 7.0e-288 994.2 870 58.4
Glyma.12G027700 Glycine max HOM05D003469 ORTHO05D004084 2.9e-278 962.2 870 56.7
Phvul.011G031000 Phaseolus vulgaris HOM05D003469 ORTHO05D004084 2.9e-278 962.2 882 55.7
FAN15G0576 Fragaria x ananassa HOM05D003469 ORTHO05D004084 4.2e-277 958.4 937 58.8
FAN24G3399 Fragaria x ananassa HOM05D003469 ORTHO05D004084 7.2e-277 957.6 937 58.7
Glyma.11G102000 Glycine max HOM05D003469 ORTHO05D004084 1.4e-275 953.4 870 56.2
Nn5g27173 Nelumbo nucifera HOM05D003469 ORTHO05D004084 4.0e-275 951.8 868 56.1
Solyc06g063420.4 Solanum lycopersicum HOM05D003469 ORTHO05D004084 4.0e-275 951.8 866 55.7
Sopen06g022880 Solanum pennellii HOM05D003469 ORTHO05D004084 2.0e-274 949.5 866 55.9
Dinv28114 Davidia involucrata HOM05D003469 ORTHO05D004084 2.6e-274 949.1 925 55.0
ClCG07G013810 Citrullus lanatus HOM05D003469 ORTHO05D004084 6.3e-273 944.5 867 56.3
arahy.Tifrunner.gnm1.ann1.M9HC5A Arachis hypogaea HOM05D003469 ORTHO05D004084 1.4e-272 943.3 878 55.2
CsaV3_3G043790 Cucumis sativus L. HOM05D003469 ORTHO05D004084 4.1e-272 941.8 867 55.9
MBI03_g18641_MAGBIO Magnolia biondii HOM05D003469 ORTHO05D004084 9.1e-272 940.6 867 55.8
MELO3C013095.2 Cucumis melo HOM05D003469 ORTHO05D004084 3.8e-270 935.3 929 55.0
Lalb_Chr07g0195581 Lupinus albus HOM05D003469 ORTHO05D004084 1.1e-269 933.7 882 56.3
Cc00_g11470 Coffea canephora HOM05D003469 ORTHO05D004084 2.8e-268 929.1 866 56.0
Lj1g0005967 Lotus japonicus HOM05D003469 ORTHO05D004084 4.0e-267 925.2 869 56.7
VMungo1127G1455 Vigna mungo HOM05D003469 ORTHO05D004084 2.6e-266 922.5 872 54.9
Eucgr.G01221 Eucalyptus grandis HOM05D003469 ORTHO05D004084 5.7e-266 921.4 865 56.0
CANSAT78G0348 Cannabis sativa HOM05D003469 ORTHO05D004084 2.9e-265 919.1 880 56.4
arahy.Tifrunner.gnm1.ann1.046I3L Arachis hypogaea HOM05D003469 ORTHO05D004084 1.4e-264 916.8 871 54.3
Gorai.008G247300 Gossypium raimondii HOM05D003469 ORTHO05D004084 4.1e-264 915.2 840 57.0
Sc09g0010840 Simmondsia chinensis HOM05D003469 ORTHO05D004084 9.2e-264 914.1 873 56.5
Atru.chr9.1130 Acer truncatum HOM05D003469 ORTHO05D004084 2.0e-263 912.9 869 54.8
FAN27G0386 Fragaria x ananassa HOM05D003469 ORTHO05D004084 3.9e-262 908.7 933 57.4
Gohir.A12G230000 Gossypium hirsutum HOM05D003469 ORTHO05D004084 2.8e-260 902.5 840 56.5
PSO170G4646 Papaver somniferum HOM05D003469 ORTHO05D004084 3.4e-258 895.6 871 54.6
Sed0013857 Sechium edule HOM05D003469 ORTHO05D004084 4.4e-258 895.2 864 53.6
TWI38G1177 Tripterygium wilfordii HOM05D003469 ORTHO05D004084 2.2e-257 892.9 841 56.2
MSTRG.1003 Avicennia marina HOM05D003469 ORTHO05D004084 1.9e-256 889.8 867 53.4
Gohir.D12G231100 Gossypium hirsutum HOM05D003469 ORTHO05D004084 4.1e-256 888.6 840 55.8
EL10Ac5g10861 Beta vulgaris HOM05D003469 ORTHO05D004084 2.7e-255 885.9 910 52.6
Duzib235G0325 Durio zibethinus HOM05D003469 ORTHO05D004084 6.0e-255 884.8 840 56.4
ECA232G2309 Erigeron canadensis HOM05D003469 ORTHO05D004084 1.0e-254 884.0 869 53.5
AUR62008300 Chenopodium quinoa HOM05D003469 ORTHO05D004084 1.5e-253 880.2 866 53.3
Rhsim12G0000800 Rhododendron simsii HOM05D003469 ORTHO05D004084 3.3e-253 879.0 749 59.3
CSS0010807 Camellia sinensis var. sinensis HOM05D003469 ORTHO05D004084 1.1e-251 874.0 924 50.6
FvH4_2g25610 Fragaria vesca HOM05D003469 ORTHO05D004084 8.9e-251 870.9 937 55.0
Aqoxy6G00028 Aquilegia oxysepala HOM05D003469 ORTHO05D004084 5.8e-250 868.2 872 52.6
Lj9C173G0 Lonicera japonica HOM05D003469 ORTHO05D004084 1.6e-247 860.1 896 52.3
HanXRQChr09g0266911 Helianthus annuus HOM05D003469 ORTHO05D004084 3.9e-246 855.5 868 52.2
Nitab4.5_0003757g0100 Nicotiana tabacum HOM05D003469 ORTHO05D004084 1.9e-245 853.2 879 51.9
Hund09398 Selenicereus undatus HOM05D003469 ORTHO05D004084 2.5e-245 852.8 866 53.0
Medtr4g079390 Medicago truncatula HOM05D003469 ORTHO05D004084 7.3e-245 851.3 876 52.4
Peaxi162Scf00818g00323 Petunia axillaris HOM05D003469 ORTHO05D004084 9.5e-245 850.9 822 54.1
QL09p054764 Quercus lobata HOM05D003469 ORTHO05D004084 1.2e-244 850.5 762 58.9
Migut.C00329 Erythranthe guttata HOM05D003469 ORTHO05D004084 2.8e-244 849.4 869 52.6
AUR62031062 Chenopodium quinoa HOM05D003469 ORTHO05D004084 1.7e-241 840.1 865 52.3
TPR.G38733 Trifolium pratense HOM05D003469 ORTHO05D004084 3.7e-241 839.0 878 51.9
Medtr4g074860 Medicago truncatula HOM05D003469 ORTHO05D004084 1.7e-238 830.1 889 50.8
Lj9C162G1 Lonicera japonica HOM05D003469 ORTHO05D004084 1.9e-237 826.6 898 51.1
CAN.G14.42 Capsicum annuum HOM05D003469 ORTHO05D004084 2.1e-236 823.2 867 50.3
DCAR_001477 Daucus carota HOM05D003469 ORTHO05D004084 3.2e-232 809.3 895 50.5
Manes.06G016500 Manihot esculenta HOM05D003469 ORTHO05D004084 7.1e-232 808.1 841 52.8
SGA_v2.0_scaffold8G04312 Striga asiatica HOM05D003469 ORTHO05D004084 1.1e-229 800.8 937 47.4
HPP92_015320 Vanilla planifolia HOM05D003469 ORTHO05D004084 1.9e-229 800.0 865 48.9
SalBow7G2370 Salvia bowleyana HOM05D003469 ORTHO05D004084 2.1e-228 796.6 901 48.6
Lsat_1_v5_gn_4_131841 Lactuca sativa HOM05D003469 ORTHO05D004084 8.7e-222 774.6 942 48.9
unitig_26.g9845 Utricularia gibba HOM05D003469 ORTHO05D004084 2.1e-220 770.0 894 47.9
Potri.013G128900 Populus trichocarpa HOM05D003469 ORTHO05D004084 7.6e-218 761.5 838 50.8
FvH4_6g38050 Fragaria vesca HOM05D003469 ORTHO05D004084 7.4e-213 745.0 860 53.6
Dinv15687 Davidia involucrata HOM05D003469 ORTHO05D004084 1.5e-210 737.3 916 47.7
Nitab4.5_0002906g0070 Nicotiana tabacum HOM05D003469 ORTHO05D004084 2.6e-210 736.5 875 44.7
Aqoxy4G02849 Aquilegia oxysepala HOM05D003469 ORTHO05D004084 4.9e-209 732.3 844 49.1
Os11g0266800 Oryza sativa ssp. japonica HOM05D003469 ORTHO05D004084 1.1e-208 731.1 842 46.4
Nitab4.5_0005224g0040 Nicotiana tabacum HOM05D003469 ORTHO05D004084 1.8e-206 723.8 861 44.6
Nitab4.5_0002354g0130 Nicotiana tabacum HOM05D003469 ORTHO05D004084 1.6e-204 717.2 879 46.3
TPR.G32330 Trifolium pratense HOM05D003469 ORTHO05D004084 1.8e-203 713.8 868 46.3
SMO164G0159 Selaginella moellendorffii HOM05D003469 ORTHO05D004084 9.0e-203 711.4 879 43.8
FvH4_6g38030 Fragaria vesca HOM05D003469 ORTHO05D004084 6.7e-198 695.3 387 88.6
vmacro00914 Vaccinium macrocarpon HOM05D003469 ORTHO05D004084 1.9e-197 693.7 1335 35.1
Peaxi162Scf00015g00107 Petunia axillaris HOM05D003469 ORTHO05D004084 6.3e-196 688.7 854 44.5
Ciclev10026956m.g Citrus clementina HOM05D003469 ORTHO05D004084 3.8e-193 679.5 850 46.8
THA.LOC104807542 Tarenaya hassleriana HOM05D003469 ORTHO05D004084 3.8e-193 679.5 841 46.6
AUR62039415 Chenopodium quinoa HOM05D003469 ORTHO05D004084 1.0e-185 654.8 664 54.2
Mapoly0024s0108 Marchantia polymorpha HOM05D003469 ORTHO05D004084 1.9e-184 650.6 820 43.9
BcaB07g34024 Brassica carinata HOM05D003469 ORTHO05D004084 1.8e-182 644.0 845 44.5
A06p13570 Brassica napus HOM05D003469 ORTHO05D004084 5.1e-182 642.5 844 44.0
BraA06t24509Z Brassica rapa HOM05D003469 ORTHO05D004084 5.1e-182 642.5 844 44.0
Carub.0001s1741 Capsella rubella HOM05D003469 ORTHO05D004084 2.6e-181 640.2 841 44.9
C05p16090 Brassica napus HOM05D003469 ORTHO05D004084 9.7e-181 638.3 844 43.2
BolC5t30309H Brassica oleracea HOM05D003469 ORTHO05D004084 9.7e-181 638.3 844 43.2
BcaC05g25689 Brassica carinata HOM05D003469 ORTHO05D004084 1.7e-180 637.5 844 43.2
Thhalv10006758m.g Eutrema salsugineum HOM05D003469 ORTHO05D004084 2.8e-180 636.7 855 43.5
AT1G17680 Arabidopsis thaliana HOM05D003469 ORTHO05D004084 4.8e-180 636.0 836 44.1
AL1G30030 Arabidopsis lyrata HOM05D003469 ORTHO05D004084 8.2e-180 635.2 852 43.4
Ah.15g095790 Amaranthus hybridus HOM05D003469 ORTHO05D004084 1.2e-178 631.3 1368 33.5
Lj9A422T76 Lonicera japonica HOM05D003469 ORTHO05D004084 2.0e-178 630.6 749 47.1
BolC4t22588H Brassica oleracea HOM05D003469 ORTHO05D004084 3.8e-177 626.3 840 43.0
AagrBONN_evm.TU.Sc2ySwM_362.2764 Anthoceros agrestis HOM05D003469 ORTHO05D004084 4.2e-176 622.9 876 40.2
BcaC02g11929 Brassica carinata HOM05D003469 ORTHO05D004084 4.7e-175 619.4 840 43.0
Ciclev10019721m.g Citrus clementina HOM05D003469 ORTHO05D004084 6.7e-174 615.5 513 61.6
Aa31LG7G2510 Aethionema arabicum HOM05D003469 ORTHO05D004084 1.8e-171 607.4 845 42.8
Pp3c8_10360 Physcomitrium patens HOM05D003469 ORTHO05D004084 2.7e-170 603.6 888 39.9
Zm00001eb171180 Zea mays HOM05D003469 ORTHO05D004084 1.0e-169 601.7 697 45.9
C04p09790 Brassica napus HOM05D003469 ORTHO05D004084 1.3e-164 584.7 855 40.9
Pp3c8_10366 Physcomitrium patens HOM05D003469 ORTHO05D004084 4.1e-155 553.1 884 37.9
ATR1089G047 Amborella trichopoda HOM05D003469 ORTHO05D004084 1.0e-153 548.5 889 37.5
THA.LOC104800339 Tarenaya hassleriana HOM05D003469 ORTHO05D004084 1.7e-153 547.7 865 40.0
Haze_14033 Corylus avellana HOM05D003469 ORTHO05D004084 1.4e-150 538.1 589 52.1
MD17G1141000 Malus domestica HOM05D003469 ORTHO05D004084 1.6e-146 524.6 409 63.8
CDE05G0531 Ceratophyllum demersum HOM05D003469 ORTHO05D004084 2.8e-143 513.8 457 58.0
EL10Ac5g10434 Beta vulgaris HOM05D003469 ORTHO05D004084 5.0e-137 493.0 653 44.0
TAR633G1289 Trochodendron aralioides HOM05D003469 ORTHO05D004084 1.5e-136 491.5 402 62.2
MD17G1141100 Malus domestica HOM05D003469 ORTHO05D004084 2.8e-135 487.3 300 80.3
TAR633G1719 Trochodendron aralioides HOM05D003469 ORTHO05D004084 6.4e-132 476.1 419 57.8
Ca_19034_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 3.8e-116 423.7 326 66.6
PGSC0003DMG400033134 Solanum tuberosum HOM05D003469 ORTHO05D004084 9.0e-110 402.5 312 64.4
Potri.013G129500 Populus trichocarpa HOM05D003469 ORTHO05D000003 2.0e-101 374.8 388 52.1
COL.COLO4_25121 Corchorus olitorius HOM05D003469 ORTHO05D004084 1.9e-99 368.2 386 52.3
AUR62000094 Chenopodium quinoa HOM05D003469 ORTHO05D004084 2.4e-99 367.9 510 42.2
C04p00480 Brassica napus HOM05D003469 ORTHO05D004084 5.5e-99 366.7 779 33.1
CBR_g36749 Chara braunii HOM05D003469 ORTHO05D004084 2.1e-98 364.8 1076 27.1
Sp1g15780 Schrenkiella parvula HOM05D003469 ORTHO05D004084 2.7e-98 364.4 424 47.9
Cpa.g.sc21.245 Carica papaya HOM05D003469 ORTHO05D004084 7.9e-98 362.8 350 54.0
CARHR018280 Cardamine hirsuta HOM05D003469 ORTHO05D004084 1.1e-86 325.9 470 40.0
CDE05G3544 Ceratophyllum demersum HOM05D003469 ORTHO05D004084 5.3e-86 323.6 382 45.8
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 8.5e-84 316.2 631 34.2
Oeu019664.1 Olea europaea HOM05D003469 ORTHO05D004084 1.1e-83 315.8 353 48.7
FAN20G2279 Fragaria x ananassa HOM05D003469 ORTHO05D004084 1.4e-78 298.9 492 38.4
SHI03012 Sapria himalayana HOM05D003469 ORTHO05D004084 7.9e-74 283.1 261 56.7
vmacro23125 Vaccinium macrocarpon HOM05D003469 ORTHO05D004084 5.7e-72 276.9 416 38.0
Ca_16139_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 5.5e-67 260.4 347 44.4
SHI03015 Sapria himalayana HOM05D003469 ORTHO05D004084 7.4e-64 250.0 245 51.4
HanXRQChr13g0406831 Helianthus annuus HOM05D003469 ORTHO05D004084 1.6e-61 242.3 174 66.1
Medtr4g074690 Medicago truncatula HOM05D003469 ORTHO05D004084 2.9e-60 238.0 283 44.5
Oeu035042.1 Olea europaea HOM05D003469 ORTHO05D004084 7.5e-56 223.4 282 47.2
QL09p054785 Quercus lobata HOM05D003469 ORTHO05D004084 7.0e-54 216.9 173 63.6
SEGI_08666 Sequoiadendron giganteum HOM05D003469 ORTHO05D004084 5.5e-51 207.2 170 61.2
C04p00500 Brassica napus HOM05D003469 ORTHO05D004084 3.6e-50 204.5 352 36.1
Ciclev10020572m.g Citrus clementina HOM05D003469 ORTHO05D004084 1.0e-49 203.0 382 39.3
Cre10.g464950 Chlamydomonas reinhardtii HOM05D003469 ORTHO05D004084 7.0e-46 190.3 361 32.4
COL.COLO4_25120 Corchorus olitorius HOM05D003469 ORTHO05D004084 1.9e-43 182.2 459 35.1
SEGI_05114 Sequoiadendron giganteum HOM05D003469 ORTHO05D004084 3.4e-40 171.4 146 60.3
Haze_14034 Corylus avellana HOM05D003469 ORTHO05D004084 5.4e-38 164.1 132 62.1
Sabra13G0107500 Salix brachista HOM05D000001 ORTHO05D000003 1.6e-37 162.5 158 56.3
BcaC02g12573 Brassica carinata HOM05D003469 ORTHO05D004084 1.3e-36 159.5 242 38.0
Thhalv10002713m.g Eutrema salsugineum HOM05D003469 ORTHO05D004084 1.7e-36 159.1 129 62.0
Psat0s3379g0080 Pisum sativum HOM05D003469 ORTHO05D004084 1.9e-35 155.6 203 48.3
Actinidia02459 Actinidia chinensis HOM05D003469 ORTHO05D004084 2.5e-35 155.2 136 57.4
Ca_16140_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 9.5e-35 153.3 151 51.7
BcaC02g12574 Brassica carinata HOM05D003469 ORTHO05D004084 1.8e-30 139.0 123 58.5
Glyma.07G124800 Glycine max HOM05D003469 ORTHO05D004084 1.2e-29 136.3 176 42.6
Ca_16137_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 1.6e-29 136.0 238 45.0
Haze_14035 Corylus avellana HOM05D003469 ORTHO05D004084 3.9e-28 131.3 210 39.0
Psat0s3379g0040 Pisum sativum HOM05D003469 ORTHO05D004084 5.6e-27 127.5 127 46.5
MD17G1140900 Malus domestica HOM05D003469 ORTHO05D004084 2.1e-26 125.6 139 66.2
SEGI_26656 Sequoiadendron giganteum HOM05D003469 ORTHO05D000001 2.1e-26 125.6 149 45.6
ECA232G2749 Erigeron canadensis HOM05D001807 ORTHO05D002044 8.0e-26 123.6 80 67.5
Rhsim02G0229800 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.4e-25 122.9 99 60.6
Cpa.g.sc21.247 Carica papaya HOM05D003469 ORTHO05D004084 5.2e-25 120.9 185 48.6
Cpa.g.sc21.244 Carica papaya HOM05D003469 ORTHO05D004084 2.0e-24 119.0 83 67.5
FAN20G1461 Fragaria x ananassa HOM05D003469 ORTHO05D004084 2.0e-24 119.0 125 52.0
Aa31LG2G17580 Aethionema arabicum HOM05D003469 ORTHO05D004084 9.8e-24 116.7 81 67.9
ATR0002G001 Amborella trichopoda HOM05D003469 ORTHO05D004084 9.2e-22 110.2 81 65.4
SHI03013 Sapria himalayana HOM05D003469 ORTHO05D004084 2.7e-21 108.6 103 52.4
Lsat_1_v5_gn_0_35341 Lactuca sativa HOM05D003469 ORTHO05D004084 2.5e-19 102.1 160 37.5
Oeu026515.1 Olea europaea HOM05D003469 ORTHO05D004084 2.1e-18 99.0 87 49.4
SEGI_39938 Sequoiadendron giganteum HOM05D003469 ORTHO05D004084 1.5e-16 92.8 145 36.6
AagrBONN_evm.TU.Sc2ySwM_362.2853 Anthoceros agrestis HOM05D003469 ORTHO05D004084 3.5e-13 81.6 96 39.6
Ca_19033_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 1.5e-11 76.3 59 57.6
Lsat_1_v5_gn_6_14080 Lactuca sativa HOM05D002718 ORTHO05D004084 1.2e-10 73.2 90 41.1
Medtr4g074700 Medicago truncatula HOM05D003469 ORTHO05D004084 4.4e-08 64.7 96 36.5
Pp3c11_22970 Physcomitrium patens HOM05D003301 ORTHO05D003665 2.9e-07 62.0 164 27.4
EL10Ac8g19107 Beta vulgaris HOM05D003881 ORTHO05D004343 4.9e-07 61.2 272 23.5
Actinidia02458 Actinidia chinensis HOM05D003469 ORTHO05D004084 6.4e-07 60.8 62 53.2
PSO135G0960 Papaver somniferum HOM05D003881 ORTHO05D004343 1.1e-06 60.1 294 22.1
Lj9A422T78 Lonicera japonica HOM05D003469 ORTHO05D029064 1.4e-06 59.7 81 48.1
PSO724G0120 Papaver somniferum HOM05D003881 ORTHO05D004343 1.9e-06 59.3 295 23.1
Psat0s2166g0160 Pisum sativum HOM05D003469 ORTHO05D004084 2.4e-06 58.9 84 44.0
BcaB02g08777 Brassica carinata HOM05D003469 ORTHO05D004084 3.2e-06 58.5 154 37.0
MCO03G148 Micromonas commoda HOM05D003469 ORTHO05D004084 4.1e-06 58.2 73 42.5


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