Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0136471 Rosa chinensis HOM05D004715 ORTHO05D005644 1.3e-108 396.4 200 100.0
RcHm_v2.0_Chr2g0123461 Rosa chinensis HOM05D004715 ORTHO05D005644 4.8e-106 387.9 200 97.0
FvH4_1g25440 Fragaria vesca HOM05D004715 ORTHO05D005644 1.7e-103 379.4 200 94.5
FAN23G0015 Fragaria x ananassa HOM05D004715 ORTHO05D005644 5.5e-102 374.4 200 93.0
FAN19G1260 Fragaria x ananassa HOM05D000191 ORTHO05D005644 1.9e-99 365.9 191 94.8
FAN26G3166 Fragaria x ananassa HOM05D004715 ORTHO05D005644 8.2e-98 360.5 191 93.2
FAN28G2078 Fragaria x ananassa HOM05D004715 ORTHO05D005644 1.4e-97 359.8 191 93.2
CANSAT56G4056 Cannabis sativa HOM05D004715 ORTHO05D005644 1.2e-80 303.5 197 73.6
Prupe.3G081400 Prunus persica HOM05D004715 ORTHO05D005644 7.7e-80 300.8 197 77.2
QL05p027948 Quercus lobata HOM05D004715 ORTHO05D005644 1.3e-79 300.1 197 72.6
CsaV3_7G032580 Cucumis sativus L. HOM05D004715 ORTHO05D005644 1.9e-78 296.2 198 73.7
ClCG09G002750 Citrullus lanatus HOM05D004715 ORTHO05D005644 2.5e-78 295.8 199 72.9
arahy.Tifrunner.gnm1.ann1.GHMT6A Arachis hypogaea HOM05D004715 ORTHO05D005644 1.8e-76 289.7 197 71.6
MELO3C023404.2 Cucumis melo HOM05D004715 ORTHO05D005644 1.8e-76 289.7 199 71.4
Phvul.005G004200 Phaseolus vulgaris HOM05D004715 ORTHO05D005644 2.3e-76 289.3 197 69.0
arahy.Tifrunner.gnm1.ann1.EP2671 Arachis hypogaea HOM05D004715 ORTHO05D005644 8.8e-76 287.3 197 71.1
CiPaw.01G245000 Carya illinoinensis HOM05D004715 ORTHO05D005644 8.8e-76 287.3 197 69.0
Lalb_Chr22g0350991 Lupinus albus HOM05D004715 ORTHO05D005644 8.8e-76 287.3 197 69.0
Glyma.04G133700 Glycine max HOM05D004715 ORTHO05D005644 1.5e-75 286.6 197 69.5
Phvul.005G019100 Phaseolus vulgaris HOM05D004715 ORTHO05D005644 7.4e-75 284.3 197 68.5
Cfa001997 Carpinus fangiana HOM05D004715 ORTHO05D005644 9.7e-75 283.9 197 69.5
Medtr1g052500 Medicago truncatula HOM05D004715 ORTHO05D005644 9.7e-75 283.9 197 68.5
Ca_12943_v3 Cicer arietinum L. HOM05D004715 ORTHO05D005644 2.8e-74 282.3 197 68.5
Sed0013432 Sechium edule HOM05D004715 ORTHO05D005644 8.2e-74 280.8 198 68.7
Medtr3g005080 Medicago truncatula HOM05D004715 ORTHO05D005644 1.1e-73 280.4 197 68.0
TPR.G25532 Trifolium pratense HOM05D004715 ORTHO05D005644 1.8e-73 279.6 197 68.5
Lj3g0005798 Lotus japonicus HOM05D004715 ORTHO05D005644 2.0e-72 276.2 200 66.5
Glyma.07G105000 Glycine max HOM05D004715 ORTHO05D005644 2.6e-72 275.8 198 67.7
TWI18G0840 Tripterygium wilfordii HOM05D004715 ORTHO05D005644 3.4e-72 275.4 197 68.5
GSVIVG01017274001 Vitis vinifera HOM05D004715 ORTHO05D005644 4.5e-72 275.0 200 66.0
TWI12G0849 Tripterygium wilfordii HOM05D004715 ORTHO05D005644 1.4e-70 270.0 191 67.5
Gohir.D10G075500 Gossypium hirsutum HOM05D004715 ORTHO05D005644 3.2e-70 268.9 199 66.3
Gorai.011G081500 Gossypium raimondii HOM05D004715 ORTHO05D005644 3.2e-70 268.9 199 66.3
Manes.11G053500 Manihot esculenta HOM05D004715 ORTHO05D005644 3.2e-70 268.9 200 67.0
Potri.006G142300 Populus trichocarpa HOM05D004715 ORTHO05D005644 3.2e-70 268.9 200 65.5
MD17G1206800 Malus domestica HOM05D004715 ORTHO05D005644 7.2e-70 267.7 197 68.5
Thecc.06G070800 Theobroma cacao HOM05D004715 ORTHO05D005644 1.2e-69 266.9 199 66.8
Aqoxy1G00791 Aquilegia oxysepala HOM05D004715 ORTHO05D005644 4.7e-69 265.0 197 62.4
Gohir.A05G125400 Gossypium hirsutum HOM05D004715 ORTHO05D005644 1.8e-68 263.1 199 65.8
Gorai.009G130400 Gossypium raimondii HOM05D004715 ORTHO05D005644 1.8e-68 263.1 199 65.8
TAR369G0040 Trochodendron aralioides HOM05D004715 ORTHO05D005644 1.8e-68 263.1 197 63.5
AT1G80190 Arabidopsis thaliana HOM05D004715 ORTHO05D005644 6.7e-68 261.2 200 64.0
Thhalv10019155m.g Eutrema salsugineum HOM05D004715 ORTHO05D005644 8.8e-68 260.8 200 64.5
AL2G41320 Arabidopsis lyrata HOM05D004715 ORTHO05D005644 1.1e-67 260.4 200 64.5
Aa31LG1G19480 Aethionema arabicum HOM05D004715 ORTHO05D005644 2.0e-67 259.6 200 64.0
Carub.0002s2733 Capsella rubella HOM05D004715 ORTHO05D005644 2.0e-67 259.6 203 63.5
Carub.0005s0104 Capsella rubella HOM05D004715 ORTHO05D005644 2.0e-67 259.6 203 63.5
Gohir.D05G126400 Gossypium hirsutum HOM05D004715 ORTHO05D005644 2.0e-67 259.6 199 64.8
Nn7g35903 Nelumbo nucifera HOM05D004715 ORTHO05D005644 5.7e-67 258.1 197 62.4
C02p37490 Brassica napus HOM05D004715 ORTHO05D005644 9.7e-67 257.3 197 63.5
Duzib160G0636 Durio zibethinus HOM05D004715 ORTHO05D005644 9.7e-67 257.3 193 65.8
Os05g0453900 Oryza sativa ssp. japonica HOM05D004715 ORTHO05D005644 9.7e-67 257.3 200 60.5
PGR102G1320 Punica granatum HOM05D004715 ORTHO05D005644 9.7e-67 257.3 197 65.5
Ciclev10026407m.g Citrus clementina HOM05D004715 ORTHO05D005644 1.7e-66 256.5 200 64.0
BcaC03g15994 Brassica carinata HOM05D004715 ORTHO05D005644 2.8e-66 255.8 197 62.9
Duzib235G0750 Durio zibethinus HOM05D004715 ORTHO05D005644 3.7e-66 255.4 199 64.3
THA.LOC104812498 Tarenaya hassleriana HOM05D004715 ORTHO05D005644 6.3e-66 254.6 200 63.5
CARHR074290 Cardamine hirsuta HOM05D004715 ORTHO05D005644 1.1e-65 253.8 200 62.0
A02p23740 Brassica napus HOM05D004715 ORTHO05D005644 3.1e-65 252.3 197 62.4
BraA02t07366Z Brassica rapa HOM05D004715 ORTHO05D005644 3.1e-65 252.3 197 62.4
Ciclev10027256m.g Citrus clementina HOM05D004715 ORTHO05D005644 7.0e-65 251.1 198 62.6
Lsat_1_v5_gn_5_132400 Lactuca sativa HOM05D004715 ORTHO05D005644 7.0e-65 251.1 197 61.9
Aa31LG4G470 Aethionema arabicum HOM05D004715 ORTHO05D005644 9.1e-65 250.8 194 63.4
BcaB02g07291 Brassica carinata HOM05D004715 ORTHO05D005644 9.1e-65 250.8 202 61.4
BcaB05g25289 Brassica carinata HOM05D004715 ORTHO05D005644 2.0e-64 249.6 200 60.5
Cpa.g.sc10.228 Carica papaya HOM05D004715 ORTHO05D005644 2.6e-64 249.2 200 63.0
FAN14G0801 Fragaria x ananassa HOM05D004715 ORTHO05D005644 2.6e-64 249.2 200 68.5
PSO384G1744 Papaver somniferum HOM05D004715 ORTHO05D005644 3.5e-64 248.8 197 60.4
HPP92_025406 Vanilla planifolia HOM05D004715 ORTHO05D005644 1.0e-63 247.3 196 58.7
Sp5g35610 Schrenkiella parvula HOM05D004715 ORTHO05D005644 1.3e-63 246.9 194 62.9
PSO339G1448 Papaver somniferum HOM05D004715 ORTHO05D005644 5.0e-63 245.0 197 59.9
DCAR_025488 Daucus carota HOM05D004715 ORTHO05D005644 6.5e-63 244.6 200 59.5
SEGI_27675 Sequoiadendron giganteum HOM05D004715 ORTHO05D005644 6.5e-63 244.6 196 58.2
CDE02G3949 Ceratophyllum demersum HOM05D004715 ORTHO05D005644 2.5e-62 242.7 196 57.7
HanXRQChr15g0463891 Helianthus annuus HOM05D004715 ORTHO05D005644 2.5e-62 242.7 198 63.1
BolC2t09760H Brassica oleracea HOM05D004715 ORTHO05D005644 1.2e-61 240.4 194 61.3
AUR62000794 Chenopodium quinoa HOM05D004715 ORTHO05D005644 1.2e-61 240.4 198 59.6
Actinidia01764 Actinidia chinensis HOM05D004715 ORTHO05D005644 2.1e-61 239.6 197 59.4
Hma1.2p1_0317F.1_g123670 Hydrangea macrophylla HOM05D004715 ORTHO05D005644 2.3e-60 236.1 197 58.9
Hma1.2p1_1398F.1_g280822 Hydrangea macrophylla HOM05D004715 ORTHO05D005644 2.3e-60 236.1 197 58.9
EL10Ac4g09393 Beta vulgaris HOM05D004715 ORTHO05D005644 3.0e-60 235.7 198 58.1
CSS0021095 Camellia sinensis var. sinensis HOM05D004715 ORTHO05D005644 3.0e-60 235.7 200 60.5
Dinv30576 Davidia involucrata HOM05D004715 ORTHO05D005644 4.0e-60 235.3 197 59.4
C06p28980 Brassica napus HOM05D004715 ORTHO05D005644 5.2e-60 235.0 195 59.5
Sc14g0006620 Simmondsia chinensis HOM05D004715 ORTHO05D005644 5.2e-60 235.0 198 59.1
Sabra06G0111400 Salix brachista HOM05D004715 ORTHO05D005644 6.7e-60 234.6 265 49.8
Atru.chr1.3057 Acer truncatum HOM05D004715 ORTHO05D005644 3.3e-59 232.3 184 63.0
Hund21699 Selenicereus undatus HOM05D004715 ORTHO05D005644 3.3e-59 232.3 192 59.4
SGA_v2.0_scaffold5G02664 Striga asiatica HOM05D004715 ORTHO05D005644 3.3e-59 232.3 224 54.5
BcaC08g45296 Brassica carinata HOM05D004715 ORTHO05D005644 4.4e-59 231.9 194 59.3
Hma1.2p1_1398F.1_g280805 Hydrangea macrophylla HOM05D004715 ORTHO05D005644 5.7e-59 231.5 197 57.9
MSTRG.11119 Avicennia marina HOM05D004715 ORTHO05D005644 9.7e-59 230.7 223 55.6
Oeu052278.1 Olea europaea HOM05D004715 ORTHO05D005644 9.7e-59 230.7 224 55.4
AUR62005173 Chenopodium quinoa HOM05D004715 ORTHO05D005644 2.2e-58 229.6 192 58.3
Lj5A69G39 Lonicera japonica HOM05D004715 ORTHO05D005644 3.7e-58 228.8 230 54.3
BolC6t38064H Brassica oleracea HOM05D004715 ORTHO05D005644 8.2e-58 227.6 195 58.5
Rhsim08G0215800 Rhododendron simsii HOM05D004715 ORTHO05D005644 9.1e-57 224.2 232 51.3
vmacro18968 Vaccinium macrocarpon HOM05D004715 ORTHO05D005644 9.1e-57 224.2 250 50.0
Haze_16520 Corylus avellana HOM05D004715 ORTHO05D005644 1.6e-56 223.4 197 57.9
Eucgr.F02544 Eucalyptus grandis HOM05D004715 ORTHO05D005644 3.5e-56 222.2 171 64.3
Cc04_g04100 Coffea canephora HOM05D004715 ORTHO05D005644 5.9e-56 221.5 205 58.0
Migut.I00797 Erythranthe guttata HOM05D004715 ORTHO05D005644 1.0e-55 220.7 224 52.2
TPR.G1414 Trifolium pratense HOM05D004715 ORTHO05D005644 5.0e-55 218.4 148 68.9
CAN.G1830.13 Capsicum annuum HOM05D004715 ORTHO05D005644 7.2e-54 214.5 230 48.3
VMungo1080G0231 Vigna mungo HOM05D006110 ORTHO05D007774 7.2e-54 214.5 145 71.0
Nitab4.5_0004281g0110 Nicotiana tabacum HOM05D004715 ORTHO05D005644 2.7e-53 212.6 224 48.7
SGA_v2.0_scaffold5G02667 Striga asiatica HOM05D005082 ORTHO05D006474 1.4e-52 210.3 231 49.8
ATR0210G050 Amborella trichopoda HOM05D004715 ORTHO05D005644 3.0e-52 209.1 171 57.3
PGSC0003DMG403012981 Solanum tuberosum HOM05D004715 ORTHO05D005644 3.0e-52 209.1 230 48.7
Solyc09g008630.3 Solanum lycopersicum HOM05D004715 ORTHO05D005644 4.0e-52 208.8 230 47.8
Sopen09g003430 Solanum pennellii HOM05D004715 ORTHO05D005644 4.0e-52 208.8 230 47.4
Ah.06g189580 Amaranthus hybridus HOM05D004715 ORTHO05D005644 2.6e-51 206.1 192 52.6
SMO347G0348 Selaginella moellendorffii HOM05D004715 ORTHO05D005644 3.4e-51 205.7 194 48.5
Atru.BG.159.p Acer truncatum HOM05D004715 ORTHO05D005644 2.4e-49 199.5 147 68.0
AagrBONN_evm.TU.Sc2ySwM_368.872 Anthoceros agrestis HOM05D004715 ORTHO05D005644 9.1e-49 197.6 200 47.0
TPR.G18869 Trifolium pratense HOM05D004715 ORTHO05D005644 1.2e-48 197.2 136 68.4
Psat5g222760 Pisum sativum HOM05D004715 ORTHO05D005644 2.7e-48 196.1 144 64.6
Oeu063807.1 Olea europaea HOM05D004715 ORTHO05D005644 1.3e-47 193.7 150 64.7
Nitab4.5_0006709g0030 Nicotiana tabacum HOM05D004715 ORTHO05D005644 2.9e-47 192.6 202 51.5
unitig_0.g2002 Utricularia gibba HOM05D004715 ORTHO05D005644 6.5e-47 191.4 252 43.3
TPR.G1424 Trifolium pratense HOM05D004715 ORTHO05D005644 5.5e-46 188.3 193 53.4
A07p26560 Brassica napus HOM05D004715 ORTHO05D005644 2.3e-44 183.0 154 59.1
Pp3c20_16980 Physcomitrium patens HOM05D004715 ORTHO05D005644 2.3e-44 183.0 197 45.7
Pp3c20_17250 Physcomitrium patens HOM05D004715 ORTHO05D005644 2.3e-44 183.0 197 45.7
SalBow2G3045 Salvia bowleyana HOM05D004715 ORTHO05D005644 2.3e-44 183.0 193 51.8
VMungo0331G0566 Vigna mungo HOM05D004715 ORTHO05D005644 2.0e-43 179.9 172 55.8
Zm00001eb065860 Zea mays HOM05D004715 ORTHO05D005644 2.0e-43 179.9 200 47.5
FvH4_6g30230 Fragaria vesca HOM05D004715 ORTHO05D005644 4.4e-43 178.7 200 56.0
Peaxi162Scf00125g00003 Petunia axillaris HOM05D004715 ORTHO05D005644 1.4e-41 173.7 156 56.4
CBR_g20274 Chara braunii HOM05D006908 ORTHO05D008662 1.3e-39 167.2 197 42.1
Rhsim03G0103800 Rhododendron simsii HOM05D004715 ORTHO05D005644 1.3e-39 167.2 200 46.5
CDE09G0533 Ceratophyllum demersum HOM05D004715 ORTHO05D005644 1.9e-38 163.3 119 58.8
Peaxi162Scf01195g00016 Petunia axillaris HOM05D004715 ORTHO05D005644 9.5e-38 161.0 189 46.6
ECA234G4462 Erigeron canadensis HOM05D004715 ORTHO05D005644 2.1e-37 159.8 148 55.4
Rhsim03G0101400 Rhododendron simsii HOM05D004715 ORTHO05D005644 7.5e-35 151.4 191 44.0
MBI14_g02860_MAGBIO Magnolia biondii HOM05D004715 ORTHO05D005644 3.7e-34 149.1 114 64.0
Gohir.A10G076000 Gossypium hirsutum HOM05D004715 ORTHO05D005644 4.1e-33 145.6 117 64.1
Ca_26811_v3 Cicer arietinum L. HOM05D004715 ORTHO05D005644 7.0e-33 144.8 114 59.6
Mapoly0008s0246 Marchantia polymorpha HOM05D004715 ORTHO05D005644 9.2e-33 144.4 198 38.9
MCO12G383 Micromonas commoda HOM05D004715 ORTHO05D005644 4.6e-32 142.1 197 36.0
COL.COLO4_12914 Corchorus olitorius HOM05D004715 ORTHO05D005644 7.8e-32 141.4 111 64.9
TAR369G0577 Trochodendron aralioides HOM05D004715 ORTHO05D005644 3.0e-31 139.4 197 41.1
Cc00_g27240 Coffea canephora HOM05D004715 ORTHO05D005644 6.6e-31 138.3 151 52.3
CDE09G0914 Ceratophyllum demersum HOM05D004715 ORTHO05D005644 3.6e-29 132.5 120 54.2
TPR.G13435 Trifolium pratense HOM05D004715 ORTHO05D005644 1.5e-27 127.1 113 54.9
BraA07t30299Z Brassica rapa HOM05D004715 ORTHO05D005644 4.4e-27 125.6 112 56.2
Gohir.A10G075900 Gossypium hirsutum HOM05D004715 ORTHO05D005644 5.8e-27 125.2 86 65.1
TPR.G30851 Trifolium pratense HOM05D004715 ORTHO05D005644 1.0e-23 114.4 79 70.9
Medtr7g052330 Medicago truncatula HOM05D004715 ORTHO05D005644 1.2e-21 107.5 187 35.8
PRCOL_00005608 Prasinoderma coloniale HOM05D004715 ORTHO05D005644 2.6e-19 99.8 205 31.7
Cre03.g161050 Chlamydomonas reinhardtii HOM05D004715 ORTHO05D005644 2.5e-14 83.2 206 28.2
MSTRG.22727 Avicennia marina HOM05D004715 ORTHO05D005644 5.6e-14 82.0 66 54.5
TAR623G1252 Trochodendron aralioides HOM05D004715 ORTHO05D005644 4.7e-13 79.0 58 70.7
Hma1.2p1_1398F.1_g280810 Hydrangea macrophylla HOM05D004715 ORTHO05D005644 1.3e-10 70.9 56 66.1
FAN02G3255 Fragaria x ananassa HOM05D004715 ORTHO05D005644 1.3e-07 60.8 33 90.9
Hma1.2p1_1398F.1_g280823 Hydrangea macrophylla HOM05D004715 ORTHO05D005644 4.3e-06 55.8 49 51.0


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