Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0132441 Rosa chinensis HOM05D005873 ORTHO05D007582 9.3e-44 179.9 94 100.0
FAN21G0636 Fragaria x ananassa HOM05D005873 ORTHO05D007582 2.1e-11 72.4 60 65.0
FvH4_3g07910 Fragaria vesca HOM05D005873 ORTHO05D007582 4.6e-11 71.2 39 87.2
FAN11G2228 Fragaria x ananassa HOM05D005873 ORTHO05D007582 4.6e-11 71.2 39 87.2
FAN16G2124 Fragaria x ananassa HOM05D005873 ORTHO05D007582 4.6e-11 71.2 39 87.2
FAN25G0256 Fragaria x ananassa HOM05D005873 ORTHO05D007582 4.6e-11 71.2 60 63.3
RcHm_v2.0_Chr5g0010641 Rosa chinensis HOM05D005873 ORTHO05D007582 4.6e-11 71.2 39 87.2
MD05G1302300 Malus domestica HOM05D005873 ORTHO05D007582 2.3e-10 68.9 67 56.7
QL05p046535 Quercus lobata HOM05D005873 ORTHO05D007582 2.3e-10 68.9 60 60.0
GSVIVG01021202001 Vitis vinifera HOM05D005873 ORTHO05D007582 3.0e-10 68.6 60 60.0
Cfa000601 Carpinus fangiana HOM05D005873 ORTHO05D007582 8.8e-10 67.0 60 60.0
Ciclev10014429m.g Citrus clementina HOM05D005873 ORTHO05D007582 8.8e-10 67.0 40 80.0
Actinidia16800 Actinidia chinensis HOM05D005873 ORTHO05D007582 1.1e-09 66.6 40 75.0
CSS0045323 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 1.1e-09 66.6 40 75.0
CSS0049485 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 1.1e-09 66.6 40 75.0
Haze_06244 Corylus avellana HOM05D005873 ORTHO05D007582 1.1e-09 66.6 39 82.1
DCAR_028009 Daucus carota HOM05D005873 ORTHO05D007582 1.5e-09 66.2 60 56.7
TAR627G0247 Trochodendron aralioides HOM05D005873 ORTHO05D007582 1.5e-09 66.2 40 77.5
Dinv04615 Davidia involucrata HOM05D005873 ORTHO05D007582 2.0e-09 65.9 40 77.5
Prupe.4G060100 Prunus persica HOM05D005873 ORTHO05D007582 2.5e-09 65.5 60 58.3
Thecc.06G172000 Theobroma cacao HOM05D005873 ORTHO05D007582 3.3e-09 65.1 60 58.3
Atru.chr10.1680 Acer truncatum HOM05D005873 ORTHO05D007582 4.3e-09 64.7 40 75.0
TWI38G0673 Tripterygium wilfordii HOM05D005873 ORTHO05D007582 5.7e-09 64.3 60 58.3
TWI63G0032 Tripterygium wilfordii HOM05D005873 ORTHO05D007582 5.7e-09 64.3 60 58.3
Nitab4.5_0003937g0030 Nicotiana tabacum HOM05D005873 ORTHO05D007582 7.4e-09 63.9 38 76.3
MD10G1281000 Malus domestica HOM05D005873 ORTHO05D007582 9.7e-09 63.5 60 56.7
CAN.G689.28 Capsicum annuum HOM05D005873 ORTHO05D007582 1.3e-08 63.2 38 76.3
Lj1C1193T7 Lonicera japonica HOM05D005873 ORTHO05D007582 1.3e-08 63.2 40 75.0
Solyc11g068930.3 Solanum lycopersicum HOM05D005873 ORTHO05D007582 1.3e-08 63.2 38 73.7
Sopen11g027640 Solanum pennellii HOM05D005873 ORTHO05D007582 1.3e-08 63.2 38 73.7
PGSC0003DMG400019634 Solanum tuberosum HOM05D005873 ORTHO05D007582 1.3e-08 63.2 38 73.7
vmacro01547 Vaccinium macrocarpon HOM05D005873 ORTHO05D007582 1.7e-08 62.8 40 70.0
HanXRQChr05g0156521 Helianthus annuus HOM05D005873 ORTHO05D007582 2.8e-08 62.0 40 72.5
HanXRQChr13g0397371 Helianthus annuus HOM05D005873 ORTHO05D007582 2.8e-08 62.0 40 72.5
Peaxi162Scf00010g03612 Petunia axillaris HOM05D005873 ORTHO05D007582 3.7e-08 61.6 38 73.7
Cpa.g.sc7.54 Carica papaya HOM05D005873 ORTHO05D007582 4.8e-08 61.2 60 55.0
Nn1g09089 Nelumbo nucifera HOM05D005873 ORTHO05D007582 4.8e-08 61.2 39 74.4
Nitab4.5_0000158g0030 Nicotiana tabacum HOM05D005873 ORTHO05D007582 4.8e-08 61.2 58 55.2
Oeu039925.1 Olea europaea HOM05D005873 ORTHO05D007582 4.8e-08 61.2 40 70.0
arahy.Tifrunner.gnm1.ann1.6H0VZY Arachis hypogaea HOM05D005873 ORTHO05D007582 6.3e-08 60.8 59 61.0
Rhsim13G0191000 Rhododendron simsii HOM05D005873 ORTHO05D007582 6.3e-08 60.8 39 69.2
Sabra04G0036300 Salix brachista HOM05D005873 ORTHO05D007582 6.3e-08 60.8 61 54.1
Lalb_Chr03g0024111 Lupinus albus HOM05D005873 ORTHO05D007582 8.2e-08 60.5 59 55.9
Manes.17G054900 Manihot esculenta HOM05D005873 ORTHO05D007582 8.2e-08 60.5 39 74.4
arahy.Tifrunner.gnm1.ann1.IZWY79 Arachis hypogaea HOM05D005873 ORTHO05D007582 1.1e-07 60.1 59 57.6
Duzib192G0329 Durio zibethinus HOM05D005873 ORTHO05D007582 1.1e-07 60.1 60 55.0
ECA236G1606 Erigeron canadensis HOM05D005873 ORTHO05D007582 1.1e-07 60.1 40 67.5
Nn1g04384 Nelumbo nucifera HOM05D005873 ORTHO05D007582 1.1e-07 60.1 39 74.4
Aqoxy4G00415 Aquilegia oxysepala HOM05D005873 ORTHO05D007582 1.4e-07 59.7 39 71.8
PSO675G7532 Papaver somniferum HOM05D005873 ORTHO05D007582 1.8e-07 59.3 59 54.2
COL.COLO4_05490 Corchorus olitorius HOM05D005873 ORTHO05D007582 2.4e-07 58.9 60 53.3
EL10Ac8g20512 Beta vulgaris HOM05D005873 ORTHO05D007582 3.1e-07 58.5 60 51.7
AUR62031177 Chenopodium quinoa HOM05D005873 ORTHO05D007582 3.1e-07 58.5 60 50.0
Glyma.12G010000 Glycine max HOM05D005873 ORTHO05D007582 3.1e-07 58.5 59 52.5
MBI06_g25992_MAGBIO Magnolia biondii HOM05D005873 ORTHO05D007582 4.1e-07 58.2 39 66.7
PSO541G6035 Papaver somniferum HOM05D005873 ORTHO05D007582 5.3e-07 57.8 59 52.5
Potri.004G055600 Populus trichocarpa HOM05D005873 ORTHO05D007582 5.3e-07 57.8 61 52.5
CiPaw.10G058200 Carya illinoinensis HOM05D005873 ORTHO05D007582 6.9e-07 57.4 39 69.2
ClCG01G023710 Citrullus lanatus HOM05D005873 ORTHO05D007582 6.9e-07 57.4 60 53.3
CSS0029481 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 9.1e-07 57.0 40 65.0
MELO3C007214.2 Cucumis melo HOM05D005873 ORTHO05D007582 9.1e-07 57.0 60 53.3
Gohir.A05G155800 Gossypium hirsutum HOM05D005873 ORTHO05D007582 9.1e-07 57.0 60 53.3
Gohir.D05G158500 Gossypium hirsutum HOM05D005873 ORTHO05D007582 9.1e-07 57.0 60 53.3
Gorai.009G163500 Gossypium raimondii HOM05D005873 ORTHO05D007582 9.1e-07 57.0 60 53.3
AUR62036593 Chenopodium quinoa HOM05D005873 ORTHO05D007582 1.2e-06 56.6 60 50.0
TPR.G8345 Trifolium pratense HOM05D005873 ORTHO05D007582 1.2e-06 56.6 59 50.8
Ca_21328_v3 Cicer arietinum L. HOM05D005873 ORTHO05D007582 1.5e-06 56.2 59 50.8
Lsat_1_v5_gn_7_23000 Lactuca sativa HOM05D005873 ORTHO05D007582 3.4e-06 55.1 40 67.5
VMungo1127G0781 Vigna mungo HOM05D005873 ORTHO05D007582 3.4e-06 55.1 59 52.5
CARHR176060 Cardamine hirsuta HOM05D005873 ORTHO05D007582 4.5e-06 54.7 59 49.2
CANSAT35G0525 Cannabis sativa HOM05D005873 ORTHO05D007582 7.7e-06 53.9 60 53.3
Sed0012124 Sechium edule HOM05D005873 ORTHO05D007582 7.7e-06 53.9 58 55.2


User provided reference genes

Program Settings