Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0116831 Rosa chinensis HOM05D000681 ORTHO05D005458 1.6e-61 239.2 117 100.0
FAN26G1956 Fragaria x ananassa HOM05D000681 ORTHO05D005458 3.6e-53 211.5 114 93.0
FvH4_1g22620 Fragaria vesca HOM05D000681 ORTHO05D005458 6.1e-53 210.7 114 93.0
FAN19G1795 Fragaria x ananassa HOM05D000681 ORTHO05D005458 6.1e-53 210.7 114 93.0
FAN23G0462 Fragaria x ananassa HOM05D000681 ORTHO05D005458 6.1e-53 210.7 114 93.0
RcHm_v2.0_Chr2g0116631 Rosa chinensis HOM05D000681 ORTHO05D005458 8.0e-53 210.3 114 92.1
CANSAT01G0682 Cannabis sativa HOM05D000681 ORTHO05D005458 5.2e-52 207.6 114 91.2
MD15G1331800 Malus domestica HOM05D000681 ORTHO05D005458 8.8e-52 206.8 114 90.4
Prupe.6G171800 Prunus persica HOM05D000681 ORTHO05D005458 8.8e-52 206.8 114 90.4
Glyma.06G146900 Glycine max HOM05D000681 ORTHO05D005458 3.3e-51 204.9 114 89.5
Glyma.04G218900 Glycine max HOM05D000681 ORTHO05D005458 5.7e-51 204.1 114 88.6
Phvul.009G139100 Phaseolus vulgaris HOM05D000681 ORTHO05D005458 5.7e-51 204.1 114 88.6
VMungo1309G3103 Vigna mungo HOM05D000681 ORTHO05D005458 5.7e-51 204.1 114 88.6
Lj1g0006962 Lotus japonicus HOM05D000681 ORTHO05D005458 7.5e-51 203.8 114 88.6
Lj4g0003781 Lotus japonicus HOM05D000681 ORTHO05D005458 7.5e-51 203.8 114 87.7
Lalb_Chr23g0272391 Lupinus albus HOM05D000681 ORTHO05D005458 7.5e-51 203.8 114 87.7
arahy.Tifrunner.gnm1.ann1.G3SQ12 Arachis hypogaea HOM05D000681 ORTHO05D005458 9.7e-51 203.4 114 86.8
arahy.Tifrunner.gnm1.ann1.TR14KI Arachis hypogaea HOM05D000681 ORTHO05D005458 9.7e-51 203.4 114 86.8
Ca_16896_v3 Cicer arietinum L. HOM05D000681 ORTHO05D005458 1.3e-50 203.0 114 87.7
Ciclev10025045m.g Citrus clementina HOM05D000681 ORTHO05D005458 1.3e-50 203.0 114 88.6
Nn1g05175 Nelumbo nucifera HOM05D000681 ORTHO05D005458 1.3e-50 203.0 114 86.8
Psat5g065080 Pisum sativum HOM05D000681 ORTHO05D005458 1.7e-50 202.6 114 87.7
Medtr3g095010 Medicago truncatula HOM05D000681 ORTHO05D005458 2.2e-50 202.2 114 86.8
CSS0026429 Camellia sinensis var. sinensis HOM05D000681 ORTHO05D005458 2.8e-50 201.8 114 87.7
CSS0032659 Camellia sinensis var. sinensis HOM05D000681 ORTHO05D005458 2.8e-50 201.8 114 87.7
Manes.12G143100 Manihot esculenta HOM05D000681 ORTHO05D005458 2.8e-50 201.8 114 86.0
QL06p031995 Quercus lobata HOM05D000681 ORTHO05D005458 3.7e-50 201.4 114 88.6
COL.COLO4_11004 Corchorus olitorius HOM05D000681 ORTHO05D005458 4.8e-50 201.1 114 86.8
Haze_25051 Corylus avellana HOM05D000681 ORTHO05D005458 4.8e-50 201.1 114 86.8
Thhalv10012861m.g Eutrema salsugineum HOM05D000681 ORTHO05D005458 4.8e-50 201.1 114 87.7
FAN28G1262 Fragaria x ananassa HOM05D000681 ORTHO05D005458 4.8e-50 201.1 128 82.8
Oeu028523.2 Olea europaea HOM05D000681 ORTHO05D005458 4.8e-50 201.1 114 87.7
vmacro18636 Vaccinium macrocarpon HOM05D000681 ORTHO05D005458 4.8e-50 201.1 114 86.8
Cc07_g16310 Coffea canephora HOM05D000681 ORTHO05D005458 6.3e-50 200.7 114 88.6
Dinv42689 Davidia involucrata HOM05D000681 ORTHO05D005458 6.3e-50 200.7 115 86.1
Gohir.D11G233700 Gossypium hirsutum HOM05D000681 ORTHO05D005458 6.3e-50 200.7 114 86.8
Gorai.007G244600 Gossypium raimondii HOM05D000681 ORTHO05D005458 6.3e-50 200.7 114 86.8
Sp6g33480 Schrenkiella parvula HOM05D000681 ORTHO05D005458 6.3e-50 200.7 114 86.8
Cfa002759 Carpinus fangiana HOM05D000681 ORTHO05D005458 8.2e-50 200.3 114 86.8
CsaV3_6G042400 Cucumis sativus L. HOM05D000681 ORTHO05D005458 8.2e-50 200.3 114 86.8
TPR.G23769 Trifolium pratense HOM05D000681 ORTHO05D005458 8.2e-50 200.3 114 86.8
MELO3C007483.2 Cucumis melo HOM05D000681 ORTHO05D005458 1.1e-49 199.9 114 86.8
Potri.005G084800 Populus trichocarpa HOM05D000681 ORTHO05D005458 1.1e-49 199.9 114 86.0
Potri.007G080600 Populus trichocarpa HOM05D000681 ORTHO05D005458 1.1e-49 199.9 114 85.1
Sc09g0002800 Simmondsia chinensis HOM05D000681 ORTHO05D005458 1.1e-49 199.9 114 86.0
Thecc.01G113800 Theobroma cacao HOM05D000681 ORTHO05D005458 1.1e-49 199.9 114 86.0
HPP92_013366 Vanilla planifolia HOM05D000681 ORTHO05D005458 1.1e-49 199.9 114 86.0
BcaB08g37171 Brassica carinata HOM05D000681 ORTHO05D005458 1.4e-49 199.5 114 86.8
Gohir.A11G198000 Gossypium hirsutum HOM05D000681 ORTHO05D005458 1.4e-49 199.5 114 86.0
Hma1.2p1_0375F.1_g138760 Hydrangea macrophylla HOM05D000681 ORTHO05D005458 1.4e-49 199.5 114 86.0
C09p67620 Brassica napus HOM05D000681 ORTHO05D005458 1.8e-49 199.1 114 86.8
Cpa.g.c37838 Carica papaya HOM05D000681 ORTHO05D005458 1.8e-49 199.1 114 86.0
Lsat_1_v5_gn_4_137440 Lactuca sativa HOM05D000681 ORTHO05D005458 1.8e-49 199.1 114 86.0
THA.LOC104799282 Tarenaya hassleriana HOM05D000681 ORTHO05D005458 2.4e-49 198.7 114 86.0
CiPaw.03G134000 Carya illinoinensis HOM05D000681 ORTHO05D005458 3.1e-49 198.4 114 86.0
Dinv19483 Davidia involucrata HOM05D000681 ORTHO05D005458 3.1e-49 198.4 114 86.0
ECA232G3656 Erigeron canadensis HOM05D000681 ORTHO05D005458 3.1e-49 198.4 114 86.8
Gohir.A02G135600 Gossypium hirsutum HOM05D000681 ORTHO05D005458 3.1e-49 198.4 114 85.1
Gorai.003G047600 Gossypium raimondii HOM05D000681 ORTHO05D005458 3.1e-49 198.4 114 85.1
PGR004G1701 Punica granatum HOM05D000681 ORTHO05D005458 3.1e-49 198.4 114 86.0
PSO170G5235 Papaver somniferum HOM05D000681 ORTHO05D005458 4.1e-49 198.0 114 86.0
PSO210G1708 Papaver somniferum HOM05D000681 ORTHO05D005458 4.1e-49 198.0 114 86.0
GSVIVG01022235001 Vitis vinifera HOM05D000681 ORTHO05D005458 4.1e-49 198.0 114 84.2
Actinidia12210 Actinidia chinensis HOM05D000681 ORTHO05D005458 5.3e-49 197.6 114 85.1
Aqoxy5G01993 Aquilegia oxysepala HOM05D000681 ORTHO05D005458 5.3e-49 197.6 114 85.1
AL6G20350 Arabidopsis lyrata HOM05D000681 ORTHO05D005458 5.3e-49 197.6 114 86.0
AL8G42320 Arabidopsis lyrata HOM05D000681 ORTHO05D005458 5.3e-49 197.6 114 86.8
Carub.0008s2567 Capsella rubella HOM05D000681 ORTHO05D005458 5.3e-49 197.6 114 86.8
ClCG01G016130 Citrullus lanatus HOM05D000681 ORTHO05D005458 5.3e-49 197.6 114 86.0
HanXRQChr09g0259711 Helianthus annuus HOM05D000681 ORTHO05D005458 5.3e-49 197.6 114 85.1
Carub.0006s0837 Capsella rubella HOM05D000681 ORTHO05D005458 7.0e-49 197.2 114 86.0
CARHR278850 Cardamine hirsuta HOM05D000681 ORTHO05D005458 7.0e-49 197.2 114 86.0
Eucgr.I00319 Eucalyptus grandis HOM05D000681 ORTHO05D005458 7.0e-49 197.2 114 86.0
Nn5g28891 Nelumbo nucifera HOM05D000681 ORTHO05D005458 7.0e-49 197.2 114 85.1
Rhsim08G0006300 Rhododendron simsii HOM05D000681 ORTHO05D005458 7.0e-49 197.2 114 84.2
THA.LOC104818476 Tarenaya hassleriana HOM05D000681 ORTHO05D005458 7.0e-49 197.2 114 85.1
A10p27550 Brassica napus HOM05D000681 ORTHO05D005458 9.1e-49 196.8 114 85.1
BraA10t44807Z Brassica rapa HOM05D000681 ORTHO05D005458 9.1e-49 196.8 114 85.1
CDE02G2865 Ceratophyllum demersum HOM05D000681 ORTHO05D005458 9.1e-49 196.8 114 84.2
MBI02_g18929_MAGBIO Magnolia biondii HOM05D000681 ORTHO05D005458 9.1e-49 196.8 114 84.2
ATR0564G351 Amborella trichopoda HOM05D000681 ORTHO05D005458 1.2e-48 196.4 114 86.0
AT5G09930 Arabidopsis thaliana HOM05D000681 ORTHO05D005458 1.2e-48 196.4 114 86.0
CDE08G1085 Ceratophyllum demersum HOM05D000681 ORTHO05D005458 1.2e-48 196.4 114 84.2
RcHm_v2.0_Chr2g0116661 Rosa chinensis HOM05D000681 ORTHO05D005458 1.2e-48 196.4 122 86.1
Sed0012802 Sechium edule HOM05D000681 ORTHO05D005458 1.2e-48 196.4 114 85.1
TAR381G0346 Trochodendron aralioides HOM05D000681 ORTHO05D005458 1.2e-48 196.4 114 83.3
Aa31LG1G17090 Aethionema arabicum HOM05D000681 ORTHO05D005458 1.6e-48 196.1 114 85.1
AT5G64840 Arabidopsis thaliana HOM05D000681 ORTHO05D005458 1.6e-48 196.1 114 86.0
Gohir.D03G046533 Gossypium hirsutum HOM05D000681 ORTHO05D005458 2.0e-48 195.7 114 84.2
Lj4A865T29 Lonicera japonica HOM05D000681 ORTHO05D005458 2.0e-48 195.7 114 84.2
Aa31LG3G17200 Aethionema arabicum HOM05D000681 ORTHO05D005458 2.7e-48 195.3 114 85.1
BolC9t59524H Brassica oleracea HOM05D000681 ORTHO05D005458 2.7e-48 195.3 114 85.1
Thhalv10003741m.g Eutrema salsugineum HOM05D000681 ORTHO05D005458 2.7e-48 195.3 114 86.0
Sp2g27920 Schrenkiella parvula HOM05D000681 ORTHO05D005458 2.7e-48 195.3 114 86.0
SGA_v2.0_scaffold2G01293 Striga asiatica HOM05D000681 ORTHO05D005458 2.7e-48 195.3 114 83.3
TWI77G0095 Tripterygium wilfordii HOM05D000681 ORTHO05D005458 2.7e-48 195.3 114 83.3
HanXRQChr15g0493501 Helianthus annuus HOM05D000681 ORTHO05D005458 4.5e-48 194.5 114 85.1
BcaC03g18282 Brassica carinata HOM05D000681 ORTHO05D005458 5.9e-48 194.1 114 84.2
BolC2t12427H Brassica oleracea HOM05D000681 ORTHO05D005458 5.9e-48 194.1 114 84.2
Sopen04g023150 Solanum pennellii HOM05D000681 ORTHO05D005458 5.9e-48 194.1 114 85.1
Atru.chr4.340 Acer truncatum HOM05D000681 ORTHO05D005458 7.7e-48 193.7 114 84.2
C02p63610 Brassica napus HOM05D000681 ORTHO05D005458 1.0e-47 193.4 114 84.2
Duzib264G0717 Durio zibethinus HOM05D000681 ORTHO05D005458 1.0e-47 193.4 114 86.0
MSTRG.2527 Avicennia marina HOM05D000681 ORTHO05D005458 1.3e-47 193.0 114 82.5
CAN.G347.2 Capsicum annuum HOM05D000681 ORTHO05D005458 1.3e-47 193.0 114 84.2
TAR625G1550 Trochodendron aralioides HOM05D000681 ORTHO05D005458 1.7e-47 192.6 114 81.6
Solyc04g051800.3 Solanum lycopersicum HOM05D000681 ORTHO05D005458 2.2e-47 192.2 114 84.2
A02p43520 Brassica napus HOM05D000681 ORTHO05D005458 2.9e-47 191.8 114 83.3
BraA02t09280Z Brassica rapa HOM05D000681 ORTHO05D005458 2.9e-47 191.8 114 83.3
Nitab4.5_0006520g0010 Nicotiana tabacum HOM05D000681 ORTHO05D005458 2.9e-47 191.8 114 84.2
BcaB07g29761 Brassica carinata HOM05D000681 ORTHO05D005458 3.8e-47 191.4 114 83.3
Duzib147G1662 Durio zibethinus HOM05D000681 ORTHO05D005458 3.8e-47 191.4 114 83.3
Peaxi162Scf00106g02319 Petunia axillaris HOM05D000681 ORTHO05D005458 3.8e-47 191.4 114 83.3
PGSC0003DMG400016576 Solanum tuberosum HOM05D000681 ORTHO05D005458 3.8e-47 191.4 114 84.2
Migut.H02441 Erythranthe guttata HOM05D000681 ORTHO05D005458 6.5e-47 190.7 114 81.6
Hund21729 Selenicereus undatus HOM05D000681 ORTHO05D005458 6.5e-47 190.7 114 81.6
unitig_747.g21746 Utricularia gibba HOM05D000681 ORTHO05D005458 8.5e-47 190.3 114 84.2
Nitab4.5_0004840g0050 Nicotiana tabacum HOM05D000681 ORTHO05D005458 1.1e-46 189.9 114 83.3
CARHR203400 Cardamine hirsuta HOM05D000681 ORTHO05D005458 1.5e-46 189.5 114 83.3
SalBow6G0295 Salvia bowleyana HOM05D000681 ORTHO05D005458 1.5e-46 189.5 114 82.5
Zm00001eb115000 Zea mays HOM05D000681 ORTHO05D005458 3.2e-46 188.3 114 80.7
Os11g0603200 Oryza sativa ssp. japonica HOM05D000681 ORTHO05D005458 1.2e-45 186.4 114 78.9
EL10Ac4g09838 Beta vulgaris HOM05D000681 ORTHO05D005458 1.6e-45 186.0 114 80.7
AUR62000701 Chenopodium quinoa HOM05D000681 ORTHO05D005458 1.6e-45 186.0 114 81.6
AUR62005252 Chenopodium quinoa HOM05D000681 ORTHO05D005458 1.6e-45 186.0 114 81.6
Sabra07G0067700 Salix brachista HOM05D000681 ORTHO05D005458 2.7e-45 185.3 142 68.3
SMO358G0544 Selaginella moellendorffii HOM05D000681 ORTHO05D005458 3.6e-45 184.9 114 78.1
Ah.06g189110 Amaranthus hybridus HOM05D000681 ORTHO05D005458 8.0e-45 183.7 116 81.0
AagrBONN_evm.TU.Sc2ySwM_228.474 Anthoceros agrestis HOM05D000681 ORTHO05D005458 7.5e-43 177.2 114 74.6
Pp3c2_22140 Physcomitrium patens HOM05D000681 ORTHO05D005458 7.5e-43 177.2 114 74.6
AagrBONN_evm.TU.Sc2ySwM_228.4630 Anthoceros agrestis HOM05D000681 ORTHO05D005458 2.8e-42 175.3 114 73.7
DCAR_001373 Daucus carota HOM05D000681 ORTHO05D005458 1.1e-41 173.3 125 72.8
Pp3c19_17230 Physcomitrium patens HOM05D000681 ORTHO05D005458 1.1e-41 173.3 114 72.8
Mapoly0003s0123 Marchantia polymorpha HOM05D000681 ORTHO05D005458 7.0e-41 170.6 114 74.6
CBR_g20265 Chara braunii HOM05D000681 ORTHO05D005458 3.8e-39 164.9 114 68.4
SGA_v2.0_scaffold51G18759 Striga asiatica HOM05D000681 ORTHO05D005458 1.1e-38 163.3 114 72.8
HPP92_013373 Vanilla planifolia HOM05D000681 ORTHO05D005458 5.5e-38 161.0 127 67.7
Rhsim08G0007000 Rhododendron simsii HOM05D000681 ORTHO05D005458 2.8e-37 158.7 121 69.4
SalBow5G4766 Salvia bowleyana HOM05D000681 ORTHO05D005458 2.0e-35 152.5 88 86.4
Cre08.g372250 Chlamydomonas reinhardtii HOM05D000681 ORTHO05D005458 5.6e-30 134.4 114 60.5
PRCOL_00003140 Prasinoderma coloniale HOM05D000681 ORTHO05D005458 4.7e-29 131.3 109 59.6
SEGI_28136 Sequoiadendron giganteum HOM05D000681 ORTHO05D005458 3.0e-28 128.6 70 84.3
QL04p089235 Quercus lobata HOM05D000681 ORTHO05D025799 1.5e-27 126.3 80 80.0
QL05p031725 Quercus lobata HOM05D000681 ORTHO05D025799 1.5e-27 126.3 80 80.0
Pp3c21_9610 Physcomitrium patens HOM05D000681 ORTHO05D005458 2.4e-25 119.0 90 70.0
MCO11G006 Micromonas commoda HOM05D000681 ORTHO05D005458 2.3e-23 112.5 112 53.6
QL06p031769 Quercus lobata HOM05D000681 ORTHO05D005458 1.6e-21 106.3 63 82.5
MD01G1020500 Malus domestica HOM05D000681 ORTHO05D005458 2.8e-21 105.5 63 84.1
AUR62007005 Chenopodium quinoa HOM05D000681 ORTHO05D044033 2.7e-16 89.0 48 87.5
QL03p015450 Quercus lobata HOM05D000681 ORTHO05D005458 3.0e-15 85.5 53 84.9
QL93p0183_0018 Quercus lobata HOM05D000681 ORTHO05D005458 3.0e-15 85.5 53 84.9
QL93p2017_0010 Quercus lobata HOM05D000681 ORTHO05D005458 3.0e-15 85.5 53 84.9
MBI13_g23287_MAGBIO Magnolia biondii HOM05D000681 ORTHO05D025799 5.8e-11 71.2 67 61.2
AUR62005304 Chenopodium quinoa HOM05D000681 ORTHO05D044033 7.1e-09 64.3 35 82.9
Pp3c2_25580 Physcomitrium patens HOM05D000681 ORTHO05D017301 2.1e-08 62.8 118 33.9
MCO16G593 Micromonas commoda HOM05D000681 ORTHO05D021288 2.7e-08 62.4 110 38.2
Cre06.g271850 Chlamydomonas reinhardtii HOM05D000681 ORTHO05D021288 2.3e-07 59.3 110 37.3
RcHm_v2.0_Chr2g0116711 Rosa chinensis HOM05D000681 ORTHO05D050339 2.3e-07 59.3 41 70.7
MCO11G712 Micromonas commoda HOM05D000681 ORTHO05D025872 3.0e-07 58.9 90 38.9
Ca_29440_v3 Cicer arietinum L. HOM05D000681 ORTHO05D148758 3.9e-07 58.5 97 34.0
Rhsim06G0129600 Rhododendron simsii HOM05D000681 ORTHO05D025799 5.1e-07 58.2 37 64.9
RcHm_v2.0_Chr4g0436571 Rosa chinensis HOM05D000681 ORTHO05D036463 5.1e-07 58.2 29 93.1
Mapoly0003s0135 Marchantia polymorpha HOM05D000681 ORTHO05D017301 8.6e-07 57.4 118 34.7
PRCOL_00006723 Prasinoderma coloniale HOM05D000681 ORTHO05D021288 1.1e-06 57.0 91 38.5
Ca_28946_v3 Cicer arietinum L. HOM05D000681 ORTHO05D017301 1.9e-06 56.2 95 35.8
Haze_27208 Corylus avellana HOM05D000681 ORTHO05D007906 1.9e-06 56.2 114 28.9
MCO03G322 Micromonas commoda HOM05D000681 ORTHO05D007906 1.9e-06 56.2 91 31.9
MCO03G566 Micromonas commoda HOM05D000681 ORTHO05D007906 1.9e-06 56.2 91 31.9
PRCOL_00006585 Prasinoderma coloniale HOM05D000681 ORTHO05D007906 1.9e-06 56.2 91 33.0
AagrBONN_evm.TU.Sc2ySwM_344.3777 Anthoceros agrestis HOM05D000681 ORTHO05D021288 2.5e-06 55.8 55 47.3
Cre11.g467781 Chlamydomonas reinhardtii HOM05D000681 ORTHO05D003832 4.3e-06 55.1 118 30.5
AUR62005971 Chenopodium quinoa HOM05D000681 ORTHO05D003965 5.6e-06 54.7 107 30.8
AUR62028099 Chenopodium quinoa HOM05D000681 ORTHO05D003965 5.6e-06 54.7 107 30.8
PRCOL_00006648 Prasinoderma coloniale HOM05D000681 ORTHO05D017301 5.6e-06 54.7 81 35.8
AUR62011609 Chenopodium quinoa HOM05D000681 ORTHO05D003965 7.3e-06 54.3 107 30.8
AUR62016426 Chenopodium quinoa HOM05D000681 ORTHO05D003965 7.3e-06 54.3 107 30.8
MCO07G138 Micromonas commoda HOM05D000681 ORTHO05D021288 9.5e-06 53.9 45 53.3


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