Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0368241 Rosa chinensis HOM05D006605 ORTHO05D008277 3.4e-78 295.4 214 100.0
FAN01G2186 Fragaria x ananassa HOM05D006605 ORTHO05D008277 1.5e-68 263.5 216 90.7
FAN06G3081 Fragaria x ananassa HOM05D006605 ORTHO05D008277 7.2e-68 261.2 216 90.3
FAN06G4444 Fragaria x ananassa HOM05D006605 ORTHO05D008277 7.2e-68 261.2 216 90.3
FvH4_7g23000 Fragaria vesca HOM05D006605 ORTHO05D008277 2.6e-65 252.7 216 89.4
FAN03G2768 Fragaria x ananassa HOM05D006605 ORTHO05D008277 7.5e-65 251.1 237 70.0
Prupe.2G239300 Prunus persica HOM05D006605 ORTHO05D008277 1.4e-58 230.3 224 76.3
FAN01G0046 Fragaria x ananassa HOM05D006605 ORTHO05D008277 8.8e-58 227.6 199 89.9
MD07G1203100 Malus domestica HOM05D006605 ORTHO05D008277 5.0e-53 211.8 227 77.1
TWI15G0193 Tripterygium wilfordii HOM05D006605 ORTHO05D008277 7.7e-46 188.0 216 75.5
ClCG11G006700 Citrullus lanatus HOM05D006605 ORTHO05D008277 3.8e-45 185.7 202 77.7
QL08p061156 Quercus lobata HOM05D006605 ORTHO05D008277 1.1e-44 184.1 221 72.4
CsaV3_6G001320 Cucumis sativus L. HOM05D006605 ORTHO05D008277 6.1e-43 178.3 217 72.8
CiPaw.02G186200 Carya illinoinensis HOM05D006605 ORTHO05D008277 8.0e-43 177.9 218 75.2
Nitab4.5_0000120g0080 Nicotiana tabacum HOM05D006605 ORTHO05D008277 8.0e-43 177.9 223 67.3
Peaxi162Scf00736g00213 Petunia axillaris HOM05D006605 ORTHO05D008277 8.0e-43 177.9 215 74.4
Cc02_g07470 Coffea canephora HOM05D006605 ORTHO05D008277 1.8e-42 176.8 232 71.1
PGSC0003DMG400034939 Solanum tuberosum HOM05D006605 ORTHO05D008277 3.0e-42 176.0 220 74.1
VMungo1383G1515 Vigna mungo HOM05D006605 ORTHO05D008277 3.0e-42 176.0 223 71.7
CANSAT56G0196 Cannabis sativa HOM05D006605 ORTHO05D008277 4.0e-42 175.6 234 70.9
Migut.F00754 Erythranthe guttata HOM05D006605 ORTHO05D008277 4.0e-42 175.6 233 67.0
Sed0013536 Sechium edule HOM05D006605 ORTHO05D008277 5.2e-42 175.3 186 81.7
Sopen06g032890 Solanum pennellii HOM05D006605 ORTHO05D008277 5.2e-42 175.3 217 73.3
Eucgr.G02956 Eucalyptus grandis HOM05D006605 ORTHO05D008277 1.2e-41 174.1 223 72.6
Glyma.18G035300 Glycine max HOM05D006605 ORTHO05D008277 1.2e-41 174.1 224 71.0
COL.COLO4_25481 Corchorus olitorius HOM05D006605 ORTHO05D008277 2.0e-41 173.3 227 68.3
Glyma.11G222100 Glycine max HOM05D006605 ORTHO05D008277 2.0e-41 173.3 226 69.9
Potri.008G058800 Populus trichocarpa HOM05D006605 ORTHO05D008277 2.0e-41 173.3 223 72.2
Dinv03376 Davidia involucrata HOM05D006605 ORTHO05D008277 2.6e-41 172.9 236 68.6
PGR142G0607 Punica granatum HOM05D006605 ORTHO05D008277 2.6e-41 172.9 218 71.6
DCAR_011727 Daucus carota HOM05D006605 ORTHO05D008277 3.4e-41 172.6 220 69.5
Nitab4.5_0002872g0060 Nicotiana tabacum HOM05D006605 ORTHO05D008277 3.4e-41 172.6 223 60.5
MELO3C008233.2 Cucumis melo HOM05D006605 ORTHO05D008277 4.4e-41 172.2 219 71.2
arahy.Tifrunner.gnm1.ann1.SV7RC5 Arachis hypogaea HOM05D006605 ORTHO05D008277 7.5e-41 171.4 216 70.8
Hma1.2p1_0039F.1_g024420 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 7.5e-41 171.4 178 82.6
Thecc.10G038800 Theobroma cacao HOM05D006605 ORTHO05D008277 7.5e-41 171.4 227 70.5
Manes.07G118800 Manihot esculenta HOM05D006605 ORTHO05D008277 9.8e-41 171.0 216 72.2
arahy.Tifrunner.gnm1.ann1.SDQ61V Arachis hypogaea HOM05D006605 ORTHO05D008277 2.2e-40 169.9 217 70.5
Medtr3g068150 Medicago truncatula HOM05D006605 ORTHO05D008277 2.2e-40 169.9 212 73.1
Potri.010G200000 Populus trichocarpa HOM05D006605 ORTHO05D008277 2.2e-40 169.9 217 71.4
Rhsim03G0134500 Rhododendron simsii HOM05D006605 ORTHO05D008277 2.2e-40 169.9 214 70.1
THA.LOC104810044 Tarenaya hassleriana HOM05D006605 ORTHO05D008277 2.9e-40 169.5 219 73.5
Actinidia02925 Actinidia chinensis HOM05D006605 ORTHO05D008277 8.3e-40 167.9 218 69.7
Gorai.011G267900 Gossypium raimondii HOM05D006605 ORTHO05D008277 1.8e-39 166.8 218 68.3
unitig_747.g21792 Utricularia gibba HOM05D006605 ORTHO05D008277 1.8e-39 166.8 223 65.5
Gohir.D10G234300 Gossypium hirsutum HOM05D006605 ORTHO05D008277 2.4e-39 166.4 218 67.9
Phvul.001G235600 Phaseolus vulgaris HOM05D006605 ORTHO05D008277 2.4e-39 166.4 225 68.9
Lsat_1_v5_gn_8_14921 Lactuca sativa HOM05D006605 ORTHO05D008277 3.2e-39 166.0 218 71.6
Duzib106G0051 Durio zibethinus HOM05D006605 ORTHO05D008277 4.1e-39 165.6 198 74.7
HanXRQChr08g0221071 Helianthus annuus HOM05D006605 ORTHO05D008277 4.1e-39 165.6 220 72.7
Sc14g0004650 Simmondsia chinensis HOM05D006605 ORTHO05D008277 7.0e-39 164.9 172 80.8
Ca_08185_v3 Cicer arietinum L. HOM05D006605 ORTHO05D008277 1.6e-38 163.7 183 79.2
Lalb_Chr18g0053081 Lupinus albus HOM05D006605 ORTHO05D008277 2.0e-38 163.3 213 71.8
TAR636G1277 Trochodendron aralioides HOM05D006605 ORTHO05D008277 2.0e-38 163.3 233 70.0
Gohir.A10G222000 Gossypium hirsutum HOM05D006605 ORTHO05D008277 3.5e-38 162.5 218 67.0
Hund13792 Selenicereus undatus HOM05D006605 ORTHO05D008277 4.6e-38 162.2 229 66.4
GSVIVG01016495001 Vitis vinifera HOM05D006605 ORTHO05D008277 3.0e-37 159.5 223 70.0
MSTRG.27369 Avicennia marina HOM05D006605 ORTHO05D008277 3.9e-37 159.1 226 66.8
CAN.G394.84 Capsicum annuum HOM05D006605 ORTHO05D008277 1.9e-36 156.8 216 69.4
Aqoxy2G02333 Aquilegia oxysepala HOM05D006605 ORTHO05D008277 4.3e-36 155.6 226 68.6
Hund16063 Selenicereus undatus HOM05D006605 ORTHO05D008277 7.3e-36 154.8 233 58.8
TPR.G2861 Trifolium pratense HOM05D006605 ORTHO05D008277 9.5e-36 154.5 182 78.0
Haze_17112 Corylus avellana HOM05D006605 ORTHO05D008277 1.2e-35 154.1 201 74.6
Os01g0144100 Oryza sativa ssp. japonica HOM05D006605 ORTHO05D008277 1.2e-35 154.1 188 73.4
Oeu001504.1 Olea europaea HOM05D006605 ORTHO05D008277 1.6e-35 153.7 182 78.0
EL10Ac2g04706 Beta vulgaris HOM05D006605 ORTHO05D008277 6.2e-35 151.8 233 62.2
MBI05_g35187_MAGBIO Magnolia biondii HOM05D006605 ORTHO05D008277 1.0e-34 151.0 228 65.4
ECA233G2444 Erigeron canadensis HOM05D006605 ORTHO05D008277 2.3e-34 149.8 211 65.9
Lj6g0021847 Lotus japonicus HOM05D006605 ORTHO05D008277 6.8e-34 148.3 191 73.8
ATR0559G079 Amborella trichopoda HOM05D006605 ORTHO05D008277 9.8e-33 144.4 231 65.4
PSO513G0127 Papaver somniferum HOM05D006605 ORTHO05D008277 9.8e-33 144.4 224 66.5
AagrBONN_evm.TU.Sc2ySwM_117.3127 Anthoceros agrestis HOM05D006605 ORTHO05D008277 2.4e-31 139.8 162 80.2
PSO339G4488 Papaver somniferum HOM05D006605 ORTHO05D008277 3.2e-31 139.4 225 64.9
AT2G44920 Arabidopsis thaliana HOM05D006605 ORTHO05D008277 4.1e-31 139.0 176 72.7
HPP92_019456 Vanilla planifolia HOM05D006605 ORTHO05D008277 3.5e-30 136.0 162 81.5
CARHR140160 Cardamine hirsuta HOM05D006605 ORTHO05D008277 7.8e-30 134.8 210 63.8
Nn2g13462 Nelumbo nucifera HOM05D006605 ORTHO05D008277 7.8e-30 134.8 142 88.0
Cpa.g.sc19.283 Carica papaya HOM05D006605 ORTHO05D008277 3.0e-29 132.9 142 88.0
AUR62012132 Chenopodium quinoa HOM05D006605 ORTHO05D008277 3.0e-29 132.9 214 66.8
Aa31LG1G26470 Aethionema arabicum HOM05D006605 ORTHO05D008277 2.8e-27 126.3 190 67.4
CDE09G0303 Ceratophyllum demersum HOM05D006605 ORTHO05D008277 3.6e-27 125.9 203 66.0
Ah.16g102590 Amaranthus hybridus HOM05D006605 ORTHO05D008277 1.4e-26 124.0 209 63.6
BcaC02g12262 Brassica carinata HOM05D006605 ORTHO05D008277 1.8e-26 123.6 174 69.5
C04p05870 Brassica napus HOM05D006605 ORTHO05D008277 1.8e-26 123.6 174 69.5
BolC4t22217H Brassica oleracea HOM05D006605 ORTHO05D008277 1.8e-26 123.6 174 69.5
SMO364G0932 Selaginella moellendorffii HOM05D006605 ORTHO05D008277 3.1e-26 122.9 168 72.6
CBR_g37590 Chara braunii HOM05D006605 ORTHO05D008277 6.8e-26 121.7 204 61.3
Pp3c11_10480 Physcomitrium patens HOM05D006605 ORTHO05D008277 1.2e-25 120.9 164 67.1
Mapoly0057s0063 Marchantia polymorpha HOM05D006605 ORTHO05D008277 2.0e-25 120.2 162 66.0
Sabra10G0154200 Salix brachista HOM05D006605 ORTHO05D008277 1.3e-24 117.5 236 47.9
BraA05t19477Z Brassica rapa HOM05D006605 ORTHO05D008277 4.9e-24 115.5 211 59.7
A05p05030 Brassica napus HOM05D006605 ORTHO05D008277 1.4e-23 114.0 216 58.8
Carub.0004s2751 Capsella rubella HOM05D006605 ORTHO05D008277 1.4e-23 114.0 216 58.3
Sp4g26990 Schrenkiella parvula HOM05D006605 ORTHO05D008277 1.2e-22 110.9 174 67.2
Lj8C79T16 Lonicera japonica HOM05D006605 ORTHO05D008277 2.1e-22 110.2 181 65.7
BcaB02g08862 Brassica carinata HOM05D006605 ORTHO05D008277 3.5e-22 109.4 174 65.5
Atru.BG.275.p Acer truncatum HOM05D006605 ORTHO05D008277 6.0e-22 108.6 125 93.6
AL4G44020 Arabidopsis lyrata HOM05D006605 ORTHO05D008277 1.3e-21 107.5 177 66.1
Dinv06757 Davidia involucrata HOM05D006605 ORTHO05D008277 1.3e-21 107.5 112 57.1
Dinv03373 Davidia involucrata HOM05D006605 ORTHO05D008277 1.7e-21 107.1 112 57.1
SEGI_08946 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 3.9e-21 105.9 59 83.1
Dinv06756 Davidia involucrata HOM05D006605 ORTHO05D008277 2.5e-20 103.2 53 90.6
Thhalv10001625m.g Eutrema salsugineum HOM05D006605 ORTHO05D008277 1.6e-19 100.5 175 64.0
Ciclev10032666m.g Citrus clementina HOM05D006605 ORTHO05D008277 3.6e-19 99.4 111 54.1
Zm00001eb335810 Zea mays HOM05D006605 ORTHO05D008277 3.6e-19 99.4 166 70.5
CSS0025701 Camellia sinensis var. sinensis HOM05D006605 ORTHO05D008277 5.8e-17 92.0 104 54.8
SGA_v2.0_scaffold389G50578 Striga asiatica HOM05D006605 ORTHO05D008277 3.2e-15 86.3 195 61.5
Hma1.2p1_0039F.1_g024430 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 5.4e-15 85.5 64 68.8
Psat5g124720 Pisum sativum HOM05D006605 ORTHO05D008277 1.1e-12 77.8 105 50.5
AUR62040704 Chenopodium quinoa HOM05D006605 ORTHO05D008277 3.3e-12 76.3 38 89.5
vmacro07051 Vaccinium macrocarpon HOM05D006605 ORTHO05D008277 5.6e-12 75.5 38 86.8
Cc01_g04360 Coffea canephora HOM05D006605 ORTHO05D008277 6.2e-11 72.0 58 65.5
SEGI_09593 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 8.9e-10 68.2 97 42.3
Oeu031356.1 Olea europaea HOM05D006605 ORTHO05D008277 5.8e-09 65.5 72 52.8
Cre16.g687300 Chlamydomonas reinhardtii HOM05D006605 ORTHO05D008277 1.3e-08 64.3 59 57.6
CDE02G3683 Ceratophyllum demersum HOM05D006605 ORTHO05D008277 6.4e-08 62.0 35 77.1


User provided reference genes

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