Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0357691 Rosa chinensis HOM05D004048 ORTHO05D004859 9.0e-193 676.8 351 100.0
FvH4_7g15370 Fragaria vesca HOM05D004048 ORTHO05D004859 3.6e-181 638.3 353 94.9
FAN06G1753 Fragaria x ananassa HOM05D004048 ORTHO05D004859 7.9e-181 637.1 353 94.6
FAN10G1698 Fragaria x ananassa HOM05D004048 ORTHO05D004859 3.9e-180 634.8 353 94.3
FAN10G3606 Fragaria x ananassa HOM05D004048 ORTHO05D004859 3.9e-180 634.8 353 94.3
FAN03G0096 Fragaria x ananassa HOM05D004048 ORTHO05D004859 2.8e-178 628.6 353 93.5
FAN06G0189 Fragaria x ananassa HOM05D004048 ORTHO05D004859 1.4e-177 626.3 370 89.7
MD07G1131200 Malus domestica HOM05D004048 ORTHO05D004859 1.5e-168 596.3 343 89.5
Prupe.2G177600 Prunus persica HOM05D004048 ORTHO05D004859 2.6e-168 595.5 350 87.7
RcHm_v2.0_Chr1g0357711 Rosa chinensis HOM05D004048 ORTHO05D004859 3.6e-165 585.1 344 86.3
Sp5g01880 Schrenkiella parvula HOM05D004048 ORTHO05D004859 2.2e-159 565.8 331 84.3
AL5G43890 Arabidopsis lyrata HOM05D004048 ORTHO05D004859 3.8e-159 565.1 331 84.3
BolC6t37921H Brassica oleracea HOM05D004048 ORTHO05D004859 1.5e-158 563.1 327 85.0
BraA07t30196Z Brassica rapa HOM05D004048 ORTHO05D004859 1.5e-158 563.1 327 85.0
CSS0027402 Camellia sinensis var. sinensis HOM05D004048 ORTHO05D004859 1.5e-158 563.1 347 81.8
BcaC08g45130 Brassica carinata HOM05D004048 ORTHO05D004859 3.2e-158 562.0 327 84.7
A07p25550 Brassica napus HOM05D004048 ORTHO05D004859 3.2e-158 562.0 327 84.7
C06p27540 Brassica napus HOM05D004048 ORTHO05D004859 5.5e-158 561.2 327 84.7
Ciclev10020577m.g Citrus clementina HOM05D004048 ORTHO05D004859 5.5e-158 561.2 335 83.6
Dinv32522 Davidia involucrata HOM05D004048 ORTHO05D004859 5.5e-158 561.2 354 80.8
BcaB02g07374 Brassica carinata HOM05D004048 ORTHO05D004859 7.2e-158 560.8 329 83.9
AT3G61530 Arabidopsis thaliana HOM05D004048 ORTHO05D004859 9.4e-158 560.5 331 83.7
CSS0029554 Camellia sinensis var. sinensis HOM05D004048 ORTHO05D004859 9.4e-158 560.5 347 81.3
Gohir.A08G032200 Gossypium hirsutum HOM05D004048 ORTHO05D004859 9.4e-158 560.5 348 80.2
HanXRQChr17g0562171 Helianthus annuus HOM05D004048 ORTHO05D004859 9.4e-158 560.5 336 83.9
COL.COLO4_12778 Corchorus olitorius HOM05D004048 ORTHO05D004859 1.6e-157 559.7 348 80.5
Gohir.D08G043100 Gossypium hirsutum HOM05D004048 ORTHO05D004859 1.6e-157 559.7 348 80.7
Hund27241 Selenicereus undatus HOM05D004048 ORTHO05D004859 1.6e-157 559.7 329 84.5
Gorai.004G041700 Gossypium raimondii HOM05D004048 ORTHO05D004859 3.6e-157 558.5 348 80.7
Manes.05G029300 Manihot esculenta HOM05D004048 ORTHO05D004859 8.0e-157 557.4 332 83.1
Thecc.01G352400 Theobroma cacao HOM05D004048 ORTHO05D004859 8.0e-157 557.4 346 80.1
Duzib268G0835 Durio zibethinus HOM05D004048 ORTHO05D004859 1.0e-156 557.0 346 80.1
Potri.014G090500 Populus trichocarpa HOM05D004048 ORTHO05D004859 1.4e-156 556.6 331 83.7
A09p53600 Brassica napus HOM05D004048 ORTHO05D004859 4.0e-156 555.1 330 83.0
Thhalv10001521m.g Eutrema salsugineum HOM05D004048 ORTHO05D004859 5.2e-156 554.7 337 81.0
Lj9C589T5 Lonicera japonica HOM05D004048 ORTHO05D004859 5.2e-156 554.7 338 82.2
Aa31LG10G15450 Aethionema arabicum HOM05D004048 ORTHO05D004859 6.7e-156 554.3 333 81.7
AT2G46110 Arabidopsis thaliana HOM05D004048 ORTHO05D004859 8.8e-156 553.9 336 81.2
vmacro13227 Vaccinium macrocarpon HOM05D004048 ORTHO05D004859 8.8e-156 553.9 346 81.2
PSO170G0644 Papaver somniferum HOM05D004048 ORTHO05D004859 1.2e-155 553.5 325 84.6
Haze_15565 Corylus avellana HOM05D004048 ORTHO05D004859 1.5e-155 553.1 360 78.6
Carub.0004s2881 Capsella rubella HOM05D004048 ORTHO05D004859 3.3e-155 552.0 336 80.7
DCAR_025214 Daucus carota HOM05D004048 ORTHO05D004859 3.3e-155 552.0 329 83.3
PSO063G1481 Papaver somniferum HOM05D004048 ORTHO05D004859 3.3e-155 552.0 325 84.3
BcaC07g40651 Brassica carinata HOM05D004048 ORTHO05D004859 4.4e-155 551.6 330 82.4
BolC8t51222H Brassica oleracea HOM05D004048 ORTHO05D004859 4.4e-155 551.6 330 82.4
CiPaw.02G034800 Carya illinoinensis HOM05D004048 ORTHO05D004859 4.4e-155 551.6 349 80.2
QL04p055532 Quercus lobata HOM05D004048 ORTHO05D004859 4.4e-155 551.6 332 81.9
Sabra14G0065600 Salix brachista HOM05D004048 ORTHO05D004859 5.7e-155 551.2 331 83.1
Sp4g28180 Schrenkiella parvula HOM05D004048 ORTHO05D004859 7.5e-155 550.8 337 80.4
C08p36390 Brassica napus HOM05D004048 ORTHO05D004859 9.7e-155 550.4 330 82.4
BraA09t40782Z Brassica rapa HOM05D004048 ORTHO05D004859 9.7e-155 550.4 330 83.0
CAN.G439.29 Capsicum annuum HOM05D004048 ORTHO05D004859 1.7e-154 549.7 329 83.0
Nitab4.5_0000615g0020 Nicotiana tabacum HOM05D004048 ORTHO05D004859 1.7e-154 549.7 331 83.1
Sc01g0003210 Simmondsia chinensis HOM05D004048 ORTHO05D004859 1.7e-154 549.7 329 82.1
Actinidia10075 Actinidia chinensis HOM05D004048 ORTHO05D004859 2.8e-154 548.9 349 79.9
EL10Ac1g00354 Beta vulgaris HOM05D004048 ORTHO05D004859 2.8e-154 548.9 338 80.8
TAR375G1056 Trochodendron aralioides HOM05D004048 ORTHO05D004859 2.8e-154 548.9 356 78.9
AUR62004413 Chenopodium quinoa HOM05D004048 ORTHO05D004859 3.7e-154 548.5 346 80.6
THA.LOC104817317 Tarenaya hassleriana HOM05D004048 ORTHO05D004859 3.7e-154 548.5 326 82.2
Migut.B01799 Erythranthe guttata HOM05D004048 ORTHO05D004859 6.3e-154 547.7 335 81.5
Eucgr.B01988 Eucalyptus grandis HOM05D004048 ORTHO05D004859 6.3e-154 547.7 328 82.6
Rhsim07G0205800 Rhododendron simsii HOM05D004048 ORTHO05D004859 8.3e-154 547.4 379 75.2
TWI23G0617 Tripterygium wilfordii HOM05D004048 ORTHO05D004859 1.1e-153 547.0 325 83.1
SGA_v2.0_scaffold4G02279 Striga asiatica HOM05D004048 ORTHO05D004859 1.4e-153 546.6 331 82.2
PGR004G0897 Punica granatum HOM05D004048 ORTHO05D004859 1.8e-153 546.2 348 79.3
Nn1g01686 Nelumbo nucifera HOM05D004048 ORTHO05D004859 2.4e-153 545.8 346 78.9
Aqoxy5G04084 Aquilegia oxysepala HOM05D004048 ORTHO05D004859 3.1e-153 545.4 349 79.7
Carub.0005s2822 Capsella rubella HOM05D004048 ORTHO05D004859 4.1e-153 545.0 328 82.0
MBI03_g34597_MAGBIO Magnolia biondii HOM05D004048 ORTHO05D004859 1.2e-152 543.5 325 84.0
Cc02_g21240 Coffea canephora HOM05D004048 ORTHO05D004859 1.6e-152 543.1 323 83.9
Solyc09g007130.3 Solanum lycopersicum HOM05D004048 ORTHO05D004859 1.6e-152 543.1 326 82.8
Lsat_1_v5_gn_4_35260 Lactuca sativa HOM05D004048 ORTHO05D004859 2.0e-152 542.7 330 83.0
Peaxi162Scf00217g00711 Petunia axillaris HOM05D004048 ORTHO05D004859 2.7e-152 542.3 327 82.6
Hma1.2p1_0335F.1_g128890 Hydrangea macrophylla HOM05D004048 ORTHO05D004859 3.5e-152 542.0 336 79.2
CsaV3_7G025860 Cucumis sativus L. HOM05D004048 ORTHO05D004859 5.9e-152 541.2 338 79.9
Gorai.004G160400 Gossypium raimondii HOM05D004048 ORTHO05D004859 7.7e-152 540.8 346 77.5
PGSC0003DMG400002011 Solanum tuberosum HOM05D004048 ORTHO05D004859 7.7e-152 540.8 354 78.2
Gohir.D08G154300 Gossypium hirsutum HOM05D004048 ORTHO05D004859 1.7e-151 539.7 346 77.5
Atru.chr7.1494 Acer truncatum HOM05D004048 ORTHO05D004859 3.8e-151 538.5 332 79.8
FvH4_7g15371 Fragaria vesca HOM05D004048 ORTHO05D004859 3.8e-151 538.5 361 78.4
VMungo0331G0386 Vigna mungo HOM05D004048 ORTHO05D004859 1.5e-150 536.6 346 77.7
CANSAT56G4107 Cannabis sativa HOM05D004048 ORTHO05D004859 1.9e-150 536.2 352 79.0
Lj1g0027864 Lotus japonicus HOM05D004048 ORTHO05D004859 4.2e-150 535.0 331 81.0
arahy.Tifrunner.gnm1.ann1.9CR96V Arachis hypogaea HOM05D004048 ORTHO05D004859 5.5e-150 534.6 348 77.6
Lalb_Chr17g0338041 Lupinus albus HOM05D004048 ORTHO05D004859 1.6e-149 533.1 330 80.9
arahy.Tifrunner.gnm1.ann1.8BBS1S Arachis hypogaea HOM05D004048 ORTHO05D004859 2.7e-149 532.3 348 77.3
Glyma.07G064600 Glycine max HOM05D004048 ORTHO05D004859 4.7e-149 531.6 331 80.7
Lj5g0009706 Lotus japonicus HOM05D004048 ORTHO05D004859 1.4e-148 530.0 331 80.7
Duzib138G1147 Durio zibethinus HOM05D004048 ORTHO05D004859 3.0e-148 528.9 377 70.8
arahy.Tifrunner.gnm1.ann1.8G3C0P Arachis hypogaea HOM05D004048 ORTHO05D004859 6.8e-148 527.7 350 76.3
TPR.G28287 Trifolium pratense HOM05D004048 ORTHO05D004859 4.4e-147 525.0 354 75.7
BcaC07g40671 Brassica carinata HOM05D004048 ORTHO05D004859 9.8e-147 523.9 337 78.6
Medtr8g028555 Medicago truncatula HOM05D004048 ORTHO05D004859 9.8e-147 523.9 353 76.2
Nitab4.5_0005222g0030 Nicotiana tabacum HOM05D004048 ORTHO05D004859 9.8e-147 523.9 330 81.2
MELO3C014805.2 Cucumis melo HOM05D004048 ORTHO05D004859 1.4e-145 520.0 323 78.6
TPR.G37181 Trifolium pratense HOM05D004048 ORTHO05D004859 2.4e-145 519.2 354 74.6
Psat4g156920 Pisum sativum HOM05D004048 ORTHO05D004859 9.1e-145 517.3 333 78.7
Rhsim07G0010400 Rhododendron simsii HOM05D004048 ORTHO05D004859 4.5e-144 515.0 343 77.8
HPP92_005267 Vanilla planifolia HOM05D004048 ORTHO05D004859 7.7e-144 514.2 330 78.2
Ca_03490_v3 Cicer arietinum L. HOM05D004048 ORTHO05D004859 1.7e-143 513.1 380 71.3
Oeu054354.2 Olea europaea HOM05D004048 ORTHO05D004859 6.6e-143 511.1 370 71.4
AUR62022619 Chenopodium quinoa HOM05D004048 ORTHO05D004859 2.8e-141 505.8 301 84.1
MELO3C012767.2 Cucumis melo HOM05D004048 ORTHO05D004859 8.0e-141 504.2 402 66.4
Sopen09g002000 Solanum pennellii HOM05D004048 ORTHO05D004859 2.3e-140 502.7 297 84.5
CARHR107270 Cardamine hirsuta HOM05D004048 ORTHO05D004859 2.8e-138 495.7 333 76.6
Rhsim07G0206900 Rhododendron simsii HOM05D004048 ORTHO05D004859 3.2e-137 492.3 396 67.4
SEGI_12250 Sequoiadendron giganteum HOM05D004048 ORTHO05D004859 4.1e-137 491.9 327 72.8
ClCG09G009090 Citrullus lanatus HOM05D004048 ORTHO05D004859 7.0e-137 491.1 341 72.7
Phvul.010G104900 Phaseolus vulgaris HOM05D004048 ORTHO05D004859 9.5e-134 480.7 287 84.0
unitig_60.g25627 Utricularia gibba HOM05D004048 ORTHO05D004859 1.6e-133 479.9 346 72.3
FAN10G3616 Fragaria x ananassa HOM05D004048 ORTHO05D004859 3.6e-133 478.8 386 68.4
Ah.05g180160 Amaranthus hybridus HOM05D004048 ORTHO05D004859 1.4e-132 476.9 342 71.9
Mapoly0035s0043 Marchantia polymorpha HOM05D004048 ORTHO05D004859 4.3e-126 455.3 336 68.5
GSVIVG01026967001 Vitis vinifera HOM05D004048 ORTHO05D004859 1.8e-124 449.9 262 86.6
Pp3c7_220 Physcomitrium patens HOM05D004048 ORTHO05D004859 8.9e-124 447.6 324 68.5
Cpa.g.sc11.73 Carica papaya HOM05D004048 ORTHO05D004859 4.4e-123 445.3 336 69.6
SMO144G0210 Selaginella moellendorffii HOM05D004048 ORTHO05D004859 4.4e-123 445.3 324 68.2
ECA234G0147 Erigeron canadensis HOM05D004048 ORTHO05D004859 1.3e-122 443.7 287 81.9
AagrBONN_evm.TU.Sc2ySwM_117.2358 Anthoceros agrestis HOM05D004048 ORTHO05D004859 4.9e-122 441.8 324 67.9
AagrBONN_evm.TU.Sc2ySwM_117.1042 Anthoceros agrestis HOM05D004048 ORTHO05D004859 1.1e-121 440.7 324 67.6
Glyma.09G254700 Glycine max HOM05D004048 ORTHO05D004859 1.2e-120 437.2 308 72.1
FAN06G1997 Fragaria x ananassa HOM05D004048 ORTHO05D004859 6.0e-120 434.9 379 64.1
MCO13G154 Micromonas commoda HOM05D004048 ORTHO05D004859 6.2e-117 424.9 334 63.5
Os01g0225500 Oryza sativa ssp. japonica HOM05D004048 ORTHO05D004859 3.1e-116 422.5 301 69.4
Gohir.A08G133000 Gossypium hirsutum HOM05D004048 ORTHO05D004859 2.6e-115 419.5 259 80.3
FAN06G4041 Fragaria x ananassa HOM05D004048 ORTHO05D004859 4.9e-114 415.2 275 79.3
Cre12.g508550 Chlamydomonas reinhardtii HOM05D004048 ORTHO05D004859 4.1e-113 412.1 336 61.0
CDE11G0110 Ceratophyllum demersum HOM05D004048 ORTHO05D004859 9.2e-113 411.0 252 82.1
CBR_g45417 Chara braunii HOM05D004048 ORTHO05D004859 9.2e-113 411.0 308 64.3
BcaC07g42671 Brassica carinata HOM05D004048 ORTHO05D004859 3.0e-111 406.0 330 65.5
FAN10G1509 Fragaria x ananassa HOM05D004048 ORTHO05D004859 4.0e-108 395.6 248 82.3
Nn6g32447 Nelumbo nucifera HOM05D004048 ORTHO05D004859 4.0e-108 395.6 337 62.6
Medtr4g037305 Medicago truncatula HOM05D004048 ORTHO05D004859 1.2e-107 394.0 248 80.2
SMO356G0035 Selaginella moellendorffii HOM05D004048 ORTHO05D004859 1.1e-105 387.5 299 65.2
ATR0751G082 Amborella trichopoda HOM05D004048 ORTHO05D004859 6.0e-104 381.7 260 77.3
Zm00001eb339000 Zea mays HOM05D004048 ORTHO05D004859 1.3e-103 380.6 240 81.2
SMO119G0299 Selaginella moellendorffii HOM05D004048 ORTHO05D004859 2.1e-101 373.2 273 67.4
SEGI_21771 Sequoiadendron giganteum HOM05D004048 ORTHO05D004859 5.8e-99 365.2 238 76.9
Eucgr.B01984 Eucalyptus grandis HOM05D004048 ORTHO05D004859 4.2e-97 359.0 356 56.5
ATR0751G137 Amborella trichopoda HOM05D004048 ORTHO05D004859 1.9e-94 350.1 242 73.6
PRCOL_00005166 Prasinoderma coloniale HOM05D004048 ORTHO05D004859 1.9e-94 350.1 320 55.6
AL4G45340 Arabidopsis lyrata HOM05D004048 ORTHO05D004859 3.5e-88 329.3 200 81.5
Eucgr.B01986 Eucalyptus grandis HOM05D004048 ORTHO05D004859 3.9e-71 272.7 285 55.8
Medtr4g037245 Medicago truncatula HOM05D004048 ORTHO05D004859 2.5e-70 270.0 203 72.9
Cfa001640 Carpinus fangiana HOM05D004048 ORTHO05D004859 5.1e-63 245.7 304 47.4
SEGI_25526 Sequoiadendron giganteum HOM05D004048 ORTHO05D004859 3.3e-62 243.0 161 73.3
PGSC0003DMG400018716 Solanum tuberosum HOM05D004048 ORTHO05D004859 6.7e-55 218.8 130 81.5
TPR.G28294 Trifolium pratense HOM05D004048 ORTHO05D004859 4.8e-53 212.6 253 52.2
Cfa003872 Carpinus fangiana HOM05D004048 ORTHO05D004859 1.1e-52 211.5 354 41.5
Os01g0225400 Oryza sativa ssp. japonica HOM05D004048 ORTHO05D004859 1.4e-52 211.1 126 82.5
arahy.Tifrunner.gnm1.ann1.CIF5FW Arachis hypogaea HOM05D004048 ORTHO05D004859 2.4e-52 210.3 159 66.0
FAN01G2460 Fragaria x ananassa HOM05D004048 ORTHO05D004859 4.4e-46 189.5 99 94.9
SHI16536 Sapria himalayana HOM05D004048 ORTHO05D004859 2.8e-45 186.8 113 78.8
Haze_27487 Corylus avellana HOM05D004048 ORTHO05D004859 4.1e-44 183.0 233 40.8
Haze_26957 Corylus avellana HOM05D005470 ORTHO05D006855 1.6e-40 171.0 219 47.5
Lj6g0001313 Lotus japonicus HOM05D004048 ORTHO05D004859 5.7e-38 162.5 102 71.6
MBI17_g16531_MAGBIO Magnolia biondii HOM05D004048 ORTHO05D004859 1.1e-36 158.3 104 75.0
Medtr4g037315 Medicago truncatula HOM05D004048 ORTHO05D004859 2.9e-34 150.2 103 68.0
MBI12_g43904_MAGBIO Magnolia biondii HOM05D004048 ORTHO05D004859 3.8e-34 149.8 96 80.2
Ca_03489_v3 Cicer arietinum L. HOM05D004048 ORTHO05D004859 1.5e-33 147.9 110 72.7
CAN.G439.28 Capsicum annuum HOM05D004048 ORTHO05D004859 8.0e-32 142.1 90 73.3
arahy.Tifrunner.gnm1.ann1.63JPLQ Arachis hypogaea HOM05D004048 ORTHO05D004859 4.9e-29 132.9 86 68.6
Medtr4g037275 Medicago truncatula HOM05D004048 ORTHO05D004859 2.4e-28 130.6 76 84.2
Actinidia20163 Actinidia chinensis HOM05D004048 ORTHO05D004859 2.3e-26 124.0 189 47.6
FAN10G2371 Fragaria x ananassa HOM05D004048 ORTHO05D038698 1.8e-23 114.4 91 68.1
arahy.Tifrunner.gnm1.ann1.DMYH1R Arachis hypogaea HOM05D004048 ORTHO05D004859 1.1e-20 105.1 77 61.0
AL4G45350 Arabidopsis lyrata HOM05D004048 ORTHO05D038698 5.4e-20 102.8 64 71.9
SGA_v2.0_scaffold4G02383 Striga asiatica HOM05D004048 ORTHO05D051375 1.6e-19 101.3 73 76.7
Potri.002G164601 Populus trichocarpa HOM05D004048 ORTHO05D004859 2.7e-19 100.5 72 63.9
ATR0751G274 Amborella trichopoda HOM05D004048 ORTHO05D004859 3.5e-19 100.1 73 58.9
HanXRQChr15g0474641 Helianthus annuus HOM05D004048 ORTHO05D004859 2.9e-18 97.1 62 80.6
DCAR_025216 Daucus carota HOM05D003118 ORTHO05D003618 1.6e-16 91.3 78 69.2


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