Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL93p1000_0001 Quercus lobata HOM05D000388 ORTHO05D000473 6.1e-54 213.8 99 100.0
Sed0005497 Sechium edule HOM05D000388 ORTHO05D000473 2.5e-31 138.7 88 76.1
CAN.G939.20 Capsicum annuum HOM05D000388 ORTHO05D000473 8.6e-24 113.6 71 71.8
Cfa021578 Carpinus fangiana HOM05D000388 ORTHO05D000473 7.5e-20 100.5 57 80.7
QL93p0270_0013 Quercus lobata HOM05D000388 ORTHO05D000473 7.5e-20 100.5 57 80.7
QL93p2019_0006 Quercus lobata HOM05D000388 ORTHO05D000473 7.5e-20 100.5 57 80.7
Lsat_1_v5_gn_1_110661 Lactuca sativa HOM05D000388 ORTHO05D000473 1.7e-19 99.4 57 78.9
Lsat_1_v5_gn_1_5820 Lactuca sativa HOM05D000388 ORTHO05D000473 1.7e-19 99.4 57 78.9
Lsat_1_v5_gn_1_88101 Lactuca sativa HOM05D000388 ORTHO05D000473 1.7e-19 99.4 57 78.9
Lsat_1_v5_gn_4_147760 Lactuca sativa HOM05D000388 ORTHO05D000473 1.7e-19 99.4 57 78.9
Lsat_1_v5_gn_5_152640 Lactuca sativa HOM05D000388 ORTHO05D000473 1.7e-19 99.4 57 78.9
Lsat_1_v5_gn_8_6001 Lactuca sativa HOM05D000388 ORTHO05D000473 1.7e-19 99.4 57 78.9
arahy.Tifrunner.gnm1.ann1.QP1IPV Arachis hypogaea HOM05D000388 ORTHO05D000473 2.9e-19 98.6 57 78.9
arahy.Tifrunner.gnm1.ann1.R5AFBV Arachis hypogaea HOM05D000388 ORTHO05D000473 2.9e-19 98.6 57 78.9
arahy.Tifrunner.gnm1.ann1.UAEM0K Arachis hypogaea HOM05D000388 ORTHO05D000473 2.9e-19 98.6 57 78.9
HanXRQChr02g0041701 Helianthus annuus HOM05D000388 ORTHO05D000473 3.7e-19 98.2 79 62.0
EL10Ac1g02282 Beta vulgaris HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
EL10As12g24020 Beta vulgaris HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
EL10As15g24142 Beta vulgaris HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
CAN.G142.9 Capsicum annuum HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
CAN.G219.23 Capsicum annuum HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
CAN.G338.31 Capsicum annuum HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
CAN.G500.82 Capsicum annuum HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
CAN.G679.6 Capsicum annuum HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
DCAR_032483 Daucus carota HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Nn055s41927 Nelumbo nucifera HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Nn287s46144 Nelumbo nucifera HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
SalBow1G5459 Salvia bowleyana HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund17621 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund18040 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund24077 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund25933 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund27450 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund27606 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund27658 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund27668 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund27701 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund27746 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund27761 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund27803 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund27842 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund27869 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund27914 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund27926 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund28000 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund28021 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund28028 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund28056 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund28087 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund28121 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund28156 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund28191 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund28206 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund28240 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund28249 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund28282 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund28294 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund28338 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund28349 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund28355 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund28370 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund28383 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund28395 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund28411 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund28442 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund28580 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund28620 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund28644 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund28684 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund28695 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund28700 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund28717 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund28804 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund28916 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund29055 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund29409 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund29448 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund29626 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund29673 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund29778 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund29904 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund29946 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund30192 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Hund31184 Selenicereus undatus HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Solyc00g500056.1 Solanum lycopersicum HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Solyc00g500138.1 Solanum lycopersicum HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Solyc00g500208.1 Solanum lycopersicum HOM05D000388 ORTHO05D000473 8.3e-19 97.1 57 77.2
Sopen12g014140 Solanum pennellii HOM05D000388 ORTHO05D000473 8.3e-19 97.1 64 65.6
Medtr3g035600 Medicago truncatula HOM05D000388 ORTHO05D000473 1.1e-18 96.7 57 77.2
PSO548G0102 Papaver somniferum HOM05D000388 ORTHO05D000473 1.1e-18 96.7 57 77.2
Actinidia03563 Actinidia chinensis HOM05D000388 ORTHO05D000473 1.4e-18 96.3 57 77.2
HanXRQChr00c0439g0574771 Helianthus annuus HOM05D000388 ORTHO05D000473 1.4e-18 96.3 65 69.2
arahy.Tifrunner.gnm1.ann1.X49995 Arachis hypogaea HOM05D000388 ORTHO05D000473 1.9e-18 95.9 58 74.1
LjContig00318g0012369 Lotus japonicus HOM05D000388 ORTHO05D000473 1.9e-18 95.9 57 75.4
Sed0022638 Sechium edule HOM05D000388 ORTHO05D000473 1.9e-18 95.9 57 75.4
AL2G20780 Arabidopsis lyrata HOM05D000388 ORTHO05D000473 2.4e-18 95.5 57 75.4
AL2G21370 Arabidopsis lyrata HOM05D000388 ORTHO05D000473 2.4e-18 95.5 57 75.4
ATCG00340 Arabidopsis thaliana HOM05D000388 ORTHO05D000473 2.4e-18 95.5 57 75.4
BNapus_Darmor_BZH_scaffold_287p00030 Brassica napus HOM05D000388 ORTHO05D000473 2.4e-18 95.5 57 75.4
C09p40460 Brassica napus HOM05D000388 ORTHO05D000473 2.4e-18 95.5 57 75.4
BraSC140t45581Z Brassica rapa HOM05D000388 ORTHO05D000473 2.4e-18 95.5 57 75.4
BraSC143t45686Z Brassica rapa HOM05D000388 ORTHO05D000473 2.4e-18 95.5 57 75.4
BraSC151t45698Z Brassica rapa HOM05D000388 ORTHO05D000473 2.4e-18 95.5 57 75.4
CAN.G16.2 Capsicum annuum HOM05D000388 ORTHO05D000473 2.4e-18 95.5 57 75.4
Sed0018502 Sechium edule HOM05D000388 ORTHO05D000473 2.4e-18 95.5 56 76.8
BNapus_Darmor_BZH_scaffold_253p00120 Brassica napus HOM05D000388 ORTHO05D000473 3.2e-18 95.1 56 76.8
BraSC151t45699Z Brassica rapa HOM05D000388 ORTHO05D000473 3.2e-18 95.1 56 76.8
CAN.G653.4 Capsicum annuum HOM05D000388 ORTHO05D000473 3.2e-18 95.1 42 92.9
LjContig00489g0014085 Lotus japonicus HOM05D000388 ORTHO05D000473 3.2e-18 95.1 42 92.9
Lalb_Chr01g0015091 Lupinus albus HOM05D000388 ORTHO05D000473 3.2e-18 95.1 57 75.4
Lalb_Chr23g0270521 Lupinus albus HOM05D000388 ORTHO05D000473 3.2e-18 95.1 57 75.4
Nn3g17668 Nelumbo nucifera HOM05D000388 ORTHO05D000473 3.2e-18 95.1 42 92.9
Sc06g0004340 Simmondsia chinensis HOM05D000388 ORTHO05D000473 3.2e-18 95.1 42 92.9
MSTRG.10730 Avicennia marina HOM05D000388 ORTHO05D000473 4.1e-18 94.7 57 73.7
Migut.J01360 Erythranthe guttata HOM05D000388 ORTHO05D000473 4.1e-18 94.7 57 75.4
Hma1.2p1_0597F.1_g186505 Hydrangea macrophylla HOM05D000388 ORTHO05D000473 4.1e-18 94.7 57 75.4
Hund28137 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.1e-18 94.7 57 75.4
SGA_v2.0_scaffold781G53596 Striga asiatica HOM05D000388 ORTHO05D000473 5.4e-18 94.4 57 73.7
EL10Ac3g06536 Beta vulgaris HOM05D000388 ORTHO05D000473 7.0e-18 94.0 57 73.7
Lj2A1239T200 Lonicera japonica HOM05D000388 ORTHO05D000473 7.0e-18 94.0 57 73.7
Lj2C1238T1 Lonicera japonica HOM05D000388 ORTHO05D000473 7.0e-18 94.0 57 73.7
Lj2C1239G17 Lonicera japonica HOM05D000388 ORTHO05D000473 7.0e-18 94.0 57 73.7
CAN.G1478.14 Capsicum annuum HOM05D000388 ORTHO05D000473 9.2e-18 93.6 51 78.4
ECA054G0002 Erigeron canadensis HOM05D000388 ORTHO05D000473 9.2e-18 93.6 57 75.4
ECA077G0005 Erigeron canadensis HOM05D000388 ORTHO05D000473 9.2e-18 93.6 57 75.4
FAN04G2382 Fragaria x ananassa HOM05D000388 ORTHO05D000473 9.2e-18 93.6 57 75.4
HanXRQChr00c0300g0573271 Helianthus annuus HOM05D000388 ORTHO05D000473 9.2e-18 93.6 57 75.4
HanXRQChr00c0530g0575481 Helianthus annuus HOM05D000388 ORTHO05D000473 9.2e-18 93.6 57 75.4
HanXRQChr04g0099351 Helianthus annuus HOM05D000388 ORTHO05D000473 9.2e-18 93.6 57 75.4
HanXRQChr07g0201041 Helianthus annuus HOM05D000388 ORTHO05D000473 9.2e-18 93.6 57 75.4
HanXRQChr08g0210261 Helianthus annuus HOM05D000388 ORTHO05D000473 9.2e-18 93.6 57 75.4
HanXRQChr11g0326701 Helianthus annuus HOM05D000388 ORTHO05D000473 9.2e-18 93.6 57 75.4
HanXRQCPg0579921 Helianthus annuus HOM05D000388 ORTHO05D000473 9.2e-18 93.6 57 75.4
Potri.013G142124 Populus trichocarpa HOM05D000388 ORTHO05D000473 9.2e-18 93.6 57 75.4
RcHm_v2.0_CPg0502261 Rosa chinensis HOM05D000388 ORTHO05D000473 9.2e-18 93.6 57 75.4
SabraPtG0002200 Salix brachista HOM05D000388 ORTHO05D000473 9.2e-18 93.6 57 75.4
AUR62022175 Chenopodium quinoa HOM05D000388 ORTHO05D000473 1.6e-17 92.8 57 75.4
Gohir.D03G073920 Gossypium hirsutum HOM05D000388 ORTHO05D000473 1.6e-17 92.8 57 70.2
VMungo0918G0001 Vigna mungo HOM05D000388 ORTHO05D000473 1.6e-17 92.8 57 70.2
BcaC04g20705 Brassica carinata HOM05D000388 ORTHO05D000473 2.7e-17 92.0 57 73.7
CARHR282000 Cardamine hirsuta HOM05D000388 ORTHO05D000473 2.7e-17 92.0 57 73.7
Medtr0002s0580 Medicago truncatula HOM05D000388 ORTHO05D000473 4.6e-17 91.3 57 71.9
Zm00001eb435440 Zea mays HOM05D000388 ORTHO05D000473 4.6e-17 91.3 57 71.9
Zm00001eb437220 Zea mays HOM05D000388 ORTHO05D000473 4.6e-17 91.3 57 71.9
Zm00001eb438340 Zea mays HOM05D000388 ORTHO05D000473 4.6e-17 91.3 57 71.9
AUR62002611 Chenopodium quinoa HOM05D000388 ORTHO05D000473 6.0e-17 90.9 57 73.7
Ah.10g027570 Amaranthus hybridus HOM05D000388 ORTHO05D000473 7.8e-17 90.5 57 70.2
unitig_87.g27946 Utricularia gibba HOM05D000388 ORTHO05D000473 7.8e-17 90.5 57 71.9
unitig_91.g26501 Utricularia gibba HOM05D000388 ORTHO05D000473 7.8e-17 90.5 57 71.9
CDE08G0702 Ceratophyllum demersum HOM05D000388 ORTHO05D000473 1.7e-16 89.4 57 71.9
PGR111G0099 Punica granatum HOM05D000388 ORTHO05D000473 1.7e-16 89.4 57 70.2
CAN.G1331.2 Capsicum annuum HOM05D000388 ORTHO05D000473 3.9e-16 88.2 42 85.7
HanXRQChr02g0044801 Helianthus annuus HOM05D000388 ORTHO05D000473 3.9e-16 88.2 57 73.7
EL10Ac4g08616 Beta vulgaris HOM05D000388 ORTHO05D000473 7.3e-15 84.0 57 68.4
SEGI_30674 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 9.5e-15 83.6 57 63.2
SEGI_23924 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 1.2e-14 83.2 57 63.2
SEGI_03054 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 1.6e-14 82.8 57 63.2
SEGI_03155 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 1.6e-14 82.8 57 63.2
SEGI_07669 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 1.6e-14 82.8 57 63.2
SEGI_12040 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 1.6e-14 82.8 57 63.2
SEGI_12770 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 1.6e-14 82.8 57 63.2
SEGI_23528 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 1.6e-14 82.8 57 63.2
SEGI_27503 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 1.6e-14 82.8 57 63.2
SEGI_29931 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 1.6e-14 82.8 57 63.2
SEGI_31236 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 1.6e-14 82.8 57 63.2
SEGI_33863 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 1.6e-14 82.8 57 63.2
BraA06t25433Z Brassica rapa HOM05D000388 ORTHO05D000473 3.6e-14 81.6 35 94.3
SEGI_26602 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 4.0e-13 78.2 42 71.4
Atru.chr13.1914 Acer truncatum HOM05D000388 ORTHO05D000473 1.4e-10 69.7 30 93.3
SMO086G0054 Selaginella moellendorffii HOM05D000388 ORTHO05D000473 2.4e-10 68.9 42 64.3
BolSC37t60762H Brassica oleracea HOM05D000388 ORTHO05D000473 1.6e-09 66.2 57 56.1
Migut.D01349 Erythranthe guttata HOM05D000388 ORTHO05D000473 4.6e-09 64.7 28 89.3
MELO3C000100.2 Cucumis melo HOM05D000388 ORTHO05D000473 7.3e-07 57.4 26 88.5
Solyc12g035730.1 Solanum lycopersicum HOM05D000388 ORTHO05D000473 4.7e-06 54.7 38 65.8


User provided reference genes

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