Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p046327 Quercus lobata HOM05D003729 ORTHO05D004384 2.7e-82 308.5 148 100.0
QL93p0119_0007 Quercus lobata HOM05D003729 ORTHO05D004384 2.7e-82 308.5 148 100.0
QL06p031735 Quercus lobata HOM05D003729 ORTHO05D004384 1.5e-19 100.1 53 90.6
QL07p009838 Quercus lobata HOM05D003729 ORTHO05D004384 3.3e-19 99.0 52 90.4
Cfa020012 Carpinus fangiana HOM05D003729 ORTHO05D004384 2.1e-18 96.3 50 92.0
CiPaw.09G047000 Carya illinoinensis HOM05D003729 ORTHO05D004384 1.8e-17 93.2 50 88.0
FvH4_2g11640 Fragaria vesca HOM05D003729 ORTHO05D004384 3.1e-17 92.4 50 88.0
RcHm_v2.0_Chr6g0270881 Rosa chinensis HOM05D003729 ORTHO05D004384 3.1e-17 92.4 50 88.0
THA.LOC104802558 Tarenaya hassleriana HOM05D003729 ORTHO05D004384 4.0e-17 92.0 61 73.8
Cpa.g.sc1212.1 Carica papaya HOM05D003729 ORTHO05D004384 5.2e-17 91.7 61 73.8
FAN15G2573 Fragaria x ananassa HOM05D003729 ORTHO05D004384 5.2e-17 91.7 49 89.8
HanXRQChr10g0311271 Helianthus annuus HOM05D003729 ORTHO05D004384 5.2e-17 91.7 50 86.0
HanXRQChr12g0359771 Helianthus annuus HOM05D003729 ORTHO05D004384 5.2e-17 91.7 50 86.0
Prupe.8G004300 Prunus persica HOM05D003729 ORTHO05D004384 5.2e-17 91.7 50 86.0
Haze_16233 Corylus avellana HOM05D003729 ORTHO05D004384 8.9e-17 90.9 50 86.0
Dinv26813 Davidia involucrata HOM05D003729 ORTHO05D004384 8.9e-17 90.9 50 86.0
Dinv34365 Davidia involucrata HOM05D003729 ORTHO05D004384 8.9e-17 90.9 50 86.0
TAR629G1039 Trochodendron aralioides HOM05D003729 ORTHO05D004384 8.9e-17 90.9 50 86.0
MBI04_g42401_MAGBIO Magnolia biondii HOM05D003729 ORTHO05D004384 1.2e-16 90.5 61 68.9
Lsat_1_v5_gn_5_75341 Lactuca sativa HOM05D003729 ORTHO05D004384 1.5e-16 90.1 50 84.0
MD06G1011700 Malus domestica HOM05D003729 ORTHO05D004384 2.0e-16 89.7 50 84.0
ECA234G1736 Erigeron canadensis HOM05D003729 ORTHO05D004384 2.6e-16 89.4 50 84.0
Hma1.2p1_0402F.1_g145090 Hydrangea macrophylla HOM05D003729 ORTHO05D004384 3.4e-16 89.0 50 84.0
Lj1A1094G13 Lonicera japonica HOM05D003729 ORTHO05D004384 3.4e-16 89.0 50 84.0
GSVIVG01033615001 Vitis vinifera HOM05D003729 ORTHO05D004384 3.4e-16 89.0 50 84.0
Ah.04g151040 Amaranthus hybridus HOM05D003729 ORTHO05D004384 4.4e-16 88.6 50 84.0
Actinidia38159 Actinidia chinensis HOM05D003729 ORTHO05D004384 5.8e-16 88.2 50 82.0
Aqoxy3G00221 Aquilegia oxysepala HOM05D003729 ORTHO05D004384 5.8e-16 88.2 61 70.5
Eucgr.B01227 Eucalyptus grandis HOM05D003729 ORTHO05D004384 5.8e-16 88.2 50 82.0
PSO782G2431 Papaver somniferum HOM05D003729 ORTHO05D004384 5.8e-16 88.2 53 73.6
vmacro09025 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 5.8e-16 88.2 50 80.0
DCAR_013638 Daucus carota HOM05D003729 ORTHO05D004384 7.5e-16 87.8 50 80.0
CsaV3_7G006250 Cucumis sativus L. HOM05D003729 ORTHO05D004384 9.9e-16 87.4 50 80.0
Prupe.5G014500 Prunus persica HOM05D003729 ORTHO05D004384 9.9e-16 87.4 50 80.0
Rhsim04G0111000 Rhododendron simsii HOM05D003729 ORTHO05D004384 9.9e-16 87.4 50 80.0
ClCG09G015010 Citrullus lanatus HOM05D003729 ORTHO05D004384 2.2e-15 86.3 50 78.0
MELO3C018665.2 Cucumis melo HOM05D003729 ORTHO05D004384 2.2e-15 86.3 50 78.0
Sed0006249 Sechium edule HOM05D003729 ORTHO05D004384 2.2e-15 86.3 50 78.0
CAN.G1099.5 Capsicum annuum HOM05D003729 ORTHO05D004384 2.9e-15 85.9 50 80.0
Nitab4.5_0000381g0340 Nicotiana tabacum HOM05D003729 ORTHO05D004384 2.9e-15 85.9 50 80.0
Nitab4.5_0005447g0050 Nicotiana tabacum HOM05D003729 ORTHO05D004384 2.9e-15 85.9 50 80.0
PSO478G2512 Papaver somniferum HOM05D003729 ORTHO05D004384 2.9e-15 85.9 53 69.8
ATR0757G154 Amborella trichopoda HOM05D003729 ORTHO05D004384 3.7e-15 85.5 49 81.6
AUR62003735 Chenopodium quinoa HOM05D003729 ORTHO05D004384 3.7e-15 85.5 50 80.0
AUR62023904 Chenopodium quinoa HOM05D003729 ORTHO05D004384 3.7e-15 85.5 50 80.0
Sp5g05590 Schrenkiella parvula HOM05D003729 ORTHO05D004384 3.7e-15 85.5 53 75.5
Sc13g0001200 Simmondsia chinensis HOM05D003729 ORTHO05D004384 3.7e-15 85.5 50 78.0
Sopen10g034990 Solanum pennellii HOM05D003729 ORTHO05D004384 3.7e-15 85.5 50 80.0
EL10Ac3g07219 Beta vulgaris HOM05D003729 ORTHO05D004384 4.9e-15 85.1 49 81.6
Cc06_g19080 Coffea canephora HOM05D003729 ORTHO05D004384 4.9e-15 85.1 50 80.0
Duzib106G1244 Durio zibethinus HOM05D003729 ORTHO05D004384 6.4e-15 84.7 50 78.0
Peaxi162Scf00146g00613 Petunia axillaris HOM05D003729 ORTHO05D004384 8.3e-15 84.3 50 78.0
Aa31LG10G11890 Aethionema arabicum HOM05D003729 ORTHO05D004384 1.1e-14 84.0 53 71.7
BcaC07g40088 Brassica carinata HOM05D003729 ORTHO05D004384 1.1e-14 84.0 53 73.6
C08p32320 Brassica napus HOM05D003729 ORTHO05D004384 1.1e-14 84.0 53 73.6
CSS0000349 Camellia sinensis var. sinensis HOM05D003729 ORTHO05D004384 1.4e-14 83.6 50 76.0
COL.COLO4_31341 Corchorus olitorius HOM05D003729 ORTHO05D004384 1.4e-14 83.6 50 76.0
Thhalv10005807m.g Eutrema salsugineum HOM05D003729 ORTHO05D004384 1.4e-14 83.6 53 75.5
Gohir.D11G323300 Gossypium hirsutum HOM05D003729 ORTHO05D004384 1.9e-14 83.2 50 74.0
Gorai.007G353300 Gossypium raimondii HOM05D003729 ORTHO05D004384 1.9e-14 83.2 50 74.0
AL5G38440 Arabidopsis lyrata HOM05D003729 ORTHO05D004384 2.4e-14 82.8 53 71.7
BcaC07g40019 Brassica carinata HOM05D003729 ORTHO05D004384 2.4e-14 82.8 53 71.7
A09p49920 Brassica napus HOM05D003729 ORTHO05D004384 2.4e-14 82.8 53 71.7
BolC8t50846H Brassica oleracea HOM05D003729 ORTHO05D004384 2.4e-14 82.8 53 71.7
AT3G56990 Arabidopsis thaliana HOM05D003729 ORTHO05D004384 3.2e-14 82.4 53 71.7
Manes.15G116200 Manihot esculenta HOM05D003729 ORTHO05D004384 3.2e-14 82.4 50 74.0
PGR031G2313 Punica granatum HOM05D003729 ORTHO05D004384 3.2e-14 82.4 50 76.0
HPP92_002023 Vanilla planifolia HOM05D003729 ORTHO05D004384 3.2e-14 82.4 50 74.0
BraA09t40443Z Brassica rapa HOM05D003729 ORTHO05D004384 4.1e-14 82.0 53 71.7
CARHR167140 Cardamine hirsuta HOM05D003729 ORTHO05D004384 5.4e-14 81.6 53 69.8
Atru.chr11.1446 Acer truncatum HOM05D003729 ORTHO05D004384 9.2e-14 80.9 50 76.0
Atru.chr11.1476 Acer truncatum HOM05D003729 ORTHO05D004384 9.2e-14 80.9 50 76.0
Gohir.A11G307900 Gossypium hirsutum HOM05D003729 ORTHO05D004384 9.2e-14 80.9 50 72.0
FAN24G0230 Fragaria x ananassa HOM05D003729 ORTHO05D004384 1.2e-13 80.5 43 88.4
Migut.N03364 Erythranthe guttata HOM05D003729 ORTHO05D004384 1.6e-13 80.1 50 70.0
Cpa.g.sc5.183 Carica papaya HOM05D003729 ORTHO05D004384 2.1e-13 79.7 62 64.5
unitig_27.g24938 Utricularia gibba HOM05D003729 ORTHO05D004384 2.1e-13 79.7 50 74.0
Carub.0005s2373 Capsella rubella HOM05D003729 ORTHO05D004384 2.7e-13 79.3 53 67.9
A07p23200 Brassica napus HOM05D003729 ORTHO05D004384 3.5e-13 79.0 52 71.2
BraA07t29984Z Brassica rapa HOM05D003729 ORTHO05D004384 3.5e-13 79.0 52 71.2
SGA_v2.0_scaffold149G36565 Striga asiatica HOM05D003729 ORTHO05D004384 3.5e-13 79.0 53 66.0
Thecc.05G137400 Theobroma cacao HOM05D003729 ORTHO05D004384 3.5e-13 79.0 50 72.0
Atru.chr1.117 Acer truncatum HOM05D003729 ORTHO05D004384 7.8e-13 77.8 50 74.0
C06p24040 Brassica napus HOM05D003729 ORTHO05D004384 1.0e-12 77.4 52 69.2
Ciclev10027979m.g Citrus clementina HOM05D003729 ORTHO05D004384 1.7e-12 76.6 50 72.0
Sabra16G0039300 Salix brachista HOM05D003729 ORTHO05D004384 1.7e-12 76.6 53 64.2
Sabra16G0044200 Salix brachista HOM05D003729 ORTHO05D004384 1.7e-12 76.6 53 64.2
BcaB02g07627 Brassica carinata HOM05D003729 ORTHO05D004384 2.3e-12 76.3 50 70.0
BcaC08g44817 Brassica carinata HOM05D003729 ORTHO05D004384 3.0e-12 75.9 52 67.3
Potri.016G037400 Populus trichocarpa HOM05D003729 ORTHO05D004384 1.1e-11 73.9 54 61.1
BolC6t37563H Brassica oleracea HOM05D003729 ORTHO05D004384 1.9e-11 73.2 52 65.4
Zm00001eb373800 Zea mays HOM05D003729 ORTHO05D004384 2.5e-11 72.8 49 69.4
Nn7g37723 Nelumbo nucifera HOM05D003729 ORTHO05D004384 4.3e-11 72.0 45 75.6
Lj1g0021267 Lotus japonicus HOM05D003729 ORTHO05D004384 5.6e-11 71.6 50 66.0
Lj6g0002169 Lotus japonicus HOM05D003729 ORTHO05D004384 5.6e-11 71.6 50 66.0
arahy.Tifrunner.gnm1.ann1.UC9EW5 Arachis hypogaea HOM05D003729 ORTHO05D004384 7.3e-11 71.2 50 66.0
TPR.G32867 Trifolium pratense HOM05D003729 ORTHO05D004384 7.3e-11 71.2 106 41.5
Ca_11233_v3 Cicer arietinum L. HOM05D003729 ORTHO05D004384 9.5e-11 70.9 50 66.0
Mapoly0009s0077 Marchantia polymorpha HOM05D003729 ORTHO05D004384 9.5e-11 70.9 61 49.2
Medtr2g081080 Medicago truncatula HOM05D003729 ORTHO05D004384 1.2e-10 70.5 50 66.0
Psat5g246840 Pisum sativum HOM05D003729 ORTHO05D004384 1.2e-10 70.5 50 66.0
Os06g0128400 Oryza sativa ssp. japonica HOM05D003729 ORTHO05D004384 3.6e-10 68.9 49 65.3
Pp3c18_60 Physcomitrium patens HOM05D003729 ORTHO05D004384 3.6e-10 68.9 50 58.0
Lalb_Chr06g0173631 Lupinus albus HOM05D003729 ORTHO05D004384 2.4e-09 66.2 50 60.0
VMungo0464G0714 Vigna mungo HOM05D003729 ORTHO05D004384 2.4e-09 66.2 50 58.0
Phvul.004G146700 Phaseolus vulgaris HOM05D003729 ORTHO05D004384 4.0e-09 65.5 50 58.0
Sabra16G0039200 Salix brachista HOM05D002722 ORTHO05D003076 5.2e-09 65.1 51 58.8
HanXRQChr09g0238921 Helianthus annuus HOM05D003729 ORTHO05D004384 2.6e-08 62.8 32 90.6
CBR_g12410 Chara braunii HOM05D003729 ORTHO05D004384 3.4e-08 62.4 53 49.1
Glyma.09G171000 Glycine max HOM05D003729 ORTHO05D004384 3.4e-08 62.4 51 58.8
Glyma.07G106900 Glycine max HOM05D003729 ORTHO05D004384 4.4e-08 62.0 51 58.8
SHI45329 Sapria himalayana HOM05D003729 ORTHO05D004384 7.6e-08 61.2 35 80.0
SHI53576 Sapria himalayana HOM05D003729 ORTHO05D004384 9.9e-08 60.8 34 82.4
SHI54010 Sapria himalayana HOM05D003729 ORTHO05D004384 9.9e-08 60.8 34 82.4
MSTRG.19814 Avicennia marina HOM05D003729 ORTHO05D004384 2.2e-07 59.7 32 84.4
SHI38377 Sapria himalayana HOM05D003729 ORTHO05D004384 2.2e-07 59.7 34 79.4
AagrBONN_evm.TU.Sc2ySwM_228.5647 Anthoceros agrestis HOM05D003729 ORTHO05D004384 3.8e-07 58.9 39 66.7
SHI51578 Sapria himalayana HOM05D003729 ORTHO05D004384 6.4e-07 58.2 32 87.5
SHI50183 Sapria himalayana HOM05D003729 ORTHO05D004384 8.4e-07 57.8 34 79.4
CANSAT64G1452 Cannabis sativa HOM05D003729 ORTHO05D004384 1.4e-06 57.0 51 54.9
Haze_16235 Corylus avellana HOM05D003729 ORTHO05D004384 2.4e-06 56.2 30 90.0
SHI53539 Sapria himalayana HOM05D003729 ORTHO05D365166 5.4e-06 55.1 33 78.8
SHI49287 Sapria himalayana HOM05D003729 ORTHO05D004384 9.2e-06 54.3 81 40.7


User provided reference genes

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