Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p031282 Quercus lobata HOM05D007177 ORTHO05D008984 9.1e-170 600.1 297 100.0
CiPaw.08G015800 Carya illinoinensis HOM05D007177 ORTHO05D008984 2.2e-139 499.2 297 83.8
CiPaw.07G217700 Carya illinoinensis HOM05D007177 ORTHO05D008984 5.9e-137 491.1 297 83.5
Dinv35881 Davidia involucrata HOM05D007177 ORTHO05D008984 4.6e-129 464.9 296 78.7
Sabra06G0192800 Salix brachista HOM05D007177 ORTHO05D008984 3.4e-124 448.7 298 73.8
Ciclev10009098m.g Citrus clementina HOM05D007177 ORTHO05D008984 8.3e-123 444.1 297 75.4
Potri.006G246500 Populus trichocarpa HOM05D007177 ORTHO05D008984 3.2e-122 442.2 290 74.5
Manes.16G068300 Manihot esculenta HOM05D007177 ORTHO05D008984 2.1e-121 439.5 298 73.8
TAR383G0793 Trochodendron aralioides HOM05D007177 ORTHO05D008984 4.6e-121 438.3 299 74.6
CSS0040333 Camellia sinensis var. sinensis HOM05D007177 ORTHO05D008984 3.0e-120 435.6 296 75.3
FAN27G1396 Fragaria x ananassa HOM05D007177 ORTHO05D008984 9.5e-119 430.6 297 72.1
Lj7A712G53 Lonicera japonica HOM05D007177 ORTHO05D008984 1.6e-118 429.9 265 80.0
Atru.chr7.2324 Acer truncatum HOM05D007177 ORTHO05D008984 2.8e-118 429.1 297 73.1
FvH4_2g30170 Fragaria vesca HOM05D007177 ORTHO05D008984 2.8e-118 429.1 297 71.4
CANSAT25G2101 Cannabis sativa HOM05D007177 ORTHO05D008984 4.7e-118 428.3 299 74.9
GSVIVG01035726001 Vitis vinifera HOM05D007177 ORTHO05D008984 1.1e-117 427.2 275 75.3
Hma1.2p1_0175F.1_g077220 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 4.0e-117 425.2 272 75.4
Nn8g39274 Nelumbo nucifera HOM05D007177 ORTHO05D008984 4.0e-117 425.2 299 73.9
Sed0014124 Sechium edule HOM05D007177 ORTHO05D008984 8.9e-117 424.1 255 80.8
Duzib168G0166 Durio zibethinus HOM05D007177 ORTHO05D008984 2.0e-116 422.9 301 73.8
Nitab4.5_0000125g0190 Nicotiana tabacum HOM05D007177 ORTHO05D008984 2.0e-116 422.9 295 72.5
Gohir.D06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 2.6e-116 422.5 301 73.4
Gorai.010G053800 Gossypium raimondii HOM05D007177 ORTHO05D008984 2.6e-116 422.5 301 73.4
Eucgr.G02593 Eucalyptus grandis HOM05D007177 ORTHO05D008984 1.7e-115 419.9 303 72.6
Thecc.09G144000 Theobroma cacao HOM05D007177 ORTHO05D008984 6.4e-115 417.9 297 73.1
RcHm_v2.0_Chr6g0312741 Rosa chinensis HOM05D007177 ORTHO05D008984 1.1e-114 417.2 299 71.9
Gohir.A06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 1.9e-114 416.4 301 72.8
TWI32G0279 Tripterygium wilfordii HOM05D007177 ORTHO05D008984 4.1e-114 415.2 299 71.2
CsaV3_2G031600 Cucumis sativus L. HOM05D007177 ORTHO05D008984 7.1e-114 414.5 301 71.1
CAN.G21.13 Capsicum annuum HOM05D007177 ORTHO05D008984 1.2e-113 413.7 295 71.9
Migut.A00273 Erythranthe guttata HOM05D007177 ORTHO05D008984 1.6e-113 413.3 267 76.4
MD08G1136300 Malus domestica HOM05D007177 ORTHO05D008984 1.6e-113 413.3 297 69.4
MELO3C011212.2 Cucumis melo HOM05D007177 ORTHO05D008984 2.1e-113 412.9 301 71.1
Solyc08g067840.3 Solanum lycopersicum HOM05D007177 ORTHO05D008984 2.1e-113 412.9 292 72.9
Sopen08g021780 Solanum pennellii HOM05D007177 ORTHO05D008984 6.0e-113 411.4 295 71.9
Nitab4.5_0009600g0010 Nicotiana tabacum HOM05D007177 ORTHO05D008984 5.1e-112 408.3 293 71.0
Lsat_1_v5_gn_6_10880 Lactuca sativa HOM05D003107 ORTHO05D008984 1.1e-111 407.1 245 79.2
ECA233G2849 Erigeron canadensis HOM05D003107 ORTHO05D008984 2.5e-111 406.0 295 68.5
vmacro11111 Vaccinium macrocarpon HOM05D007177 ORTHO05D008984 7.3e-111 404.4 297 70.7
Hund26404 Selenicereus undatus HOM05D007177 ORTHO05D008984 9.5e-111 404.1 263 74.5
Rhsim02G0187100 Rhododendron simsii HOM05D007177 ORTHO05D008984 6.8e-109 397.9 298 68.5
MD15G1115400 Malus domestica HOM05D007177 ORTHO05D008984 2.0e-108 396.4 257 73.9
THA.LOC104815045 Tarenaya hassleriana HOM05D007177 ORTHO05D008984 2.0e-108 396.4 248 75.8
Aa31LG3G15740 Aethionema arabicum HOM05D007177 ORTHO05D008984 3.4e-108 395.6 258 74.0
HanXRQChr02g0048101 Helianthus annuus HOM05D007177 ORTHO05D008984 3.4e-108 395.6 305 66.6
Ah.10g025430 Amaranthus hybridus HOM05D007177 ORTHO05D008984 4.4e-108 395.2 297 67.0
MSTRG.11740 Avicennia marina HOM05D007177 ORTHO05D008984 1.7e-107 393.3 239 81.2
Actinidia13290 Actinidia chinensis HOM05D007177 ORTHO05D008984 1.9e-106 389.8 280 72.5
DCAR_006262 Daucus carota HOM05D007177 ORTHO05D008984 3.2e-106 389.0 300 66.0
Lalb_Chr23g0269021 Lupinus albus HOM05D007177 ORTHO05D008984 3.2e-106 389.0 299 68.9
SalBow4G1425 Salvia bowleyana HOM05D007177 ORTHO05D008984 3.2e-106 389.0 251 76.1
AUR62032383 Chenopodium quinoa HOM05D007177 ORTHO05D008984 4.2e-106 388.7 284 67.6
Thhalv10014231m.g Eutrema salsugineum HOM05D007177 ORTHO05D008984 5.4e-106 388.3 300 65.0
A10p26300 Brassica napus HOM05D007177 ORTHO05D008984 9.2e-106 387.5 259 73.4
BraA10t44687Z Brassica rapa HOM05D007177 ORTHO05D008984 9.2e-106 387.5 259 73.4
Cc08_g08290 Coffea canephora HOM05D007177 ORTHO05D008984 1.6e-105 386.7 249 76.7
BcaC04g19225 Brassica carinata HOM05D007177 ORTHO05D008984 2.1e-105 386.3 295 65.8
C09p65410 Brassica napus HOM05D007177 ORTHO05D008984 2.1e-105 386.3 295 65.8
BolC9t59366H Brassica oleracea HOM05D007177 ORTHO05D008984 2.1e-105 386.3 295 65.8
Sp6g32150 Schrenkiella parvula HOM05D007177 ORTHO05D008984 2.1e-105 386.3 257 72.0
Peaxi162Scf00105g01429 Petunia axillaris HOM05D007177 ORTHO05D008984 4.6e-105 385.2 236 79.7
arahy.Tifrunner.gnm1.ann1.JYH77Y Arachis hypogaea HOM05D007177 ORTHO05D008984 5.1e-104 381.7 246 77.2
CARHR201780 Cardamine hirsuta HOM05D007177 ORTHO05D008984 1.5e-103 380.2 256 72.3
BcaB08g37058 Brassica carinata HOM05D007177 ORTHO05D008984 4.3e-103 378.6 303 63.4
Cpa.g.sc91.5 Carica papaya HOM05D007177 ORTHO05D008984 7.3e-103 377.9 216 83.8
AT5G11450 Arabidopsis thaliana HOM05D007177 ORTHO05D008984 9.6e-103 377.5 257 71.2
AL6G22110 Arabidopsis lyrata HOM05D007177 ORTHO05D008984 1.2e-102 377.1 257 71.6
unitig_748.g7498 Utricularia gibba HOM05D007177 ORTHO05D008984 3.6e-102 375.6 297 65.3
Carub.0006s0990 Capsella rubella HOM05D007177 ORTHO05D008984 1.1e-101 374.0 248 73.8
ClCG08G012880 Citrullus lanatus HOM05D007177 ORTHO05D008984 1.4e-101 373.6 366 57.9
Glyma.06G073600 Glycine max HOM05D007177 ORTHO05D008984 1.4e-101 373.6 300 64.7
AUR62024834 Chenopodium quinoa HOM05D007177 ORTHO05D008984 2.6e-100 369.4 301 62.1
FAN24G2430 Fragaria x ananassa HOM05D007177 ORTHO05D008984 2.6e-100 369.4 267 70.8
Lj1g0018262 Lotus japonicus HOM05D007177 ORTHO05D008984 9.9e-100 367.5 302 63.6
PSO063G2030 Papaver somniferum HOM05D007177 ORTHO05D008984 1.4e-98 363.6 309 61.5
Phvul.009G098000 Phaseolus vulgaris HOM05D007177 ORTHO05D008984 1.4e-98 363.6 302 63.9
PSO782G2748 Papaver somniferum HOM05D007177 ORTHO05D008984 1.9e-98 363.2 309 61.8
Zm00001eb159760 Zea mays HOM05D007177 ORTHO05D008984 2.4e-98 362.8 303 61.7
CDE01G0003 Ceratophyllum demersum HOM05D007177 ORTHO05D008984 4.6e-97 358.6 239 72.4
VMungo1309G2383 Vigna mungo HOM05D007177 ORTHO05D008984 1.3e-96 357.1 302 62.9
Os01g0617900 Oryza sativa ssp. japonica HOM05D007177 ORTHO05D008984 6.6e-96 354.8 268 67.2
Zm00001eb358300 Zea mays HOM05D007177 ORTHO05D008984 1.3e-94 350.5 299 61.9
TPR.G34677 Trifolium pratense HOM05D007177 ORTHO05D008984 2.1e-94 349.7 270 65.6
Haze_21624 Corylus avellana HOM05D007177 ORTHO05D008984 3.6e-94 349.0 266 71.1
HPP92_021881 Vanilla planifolia HOM05D007177 ORTHO05D008984 8.1e-94 347.8 299 62.5
Medtr3g108040 Medicago truncatula HOM05D007177 ORTHO05D008984 1.1e-93 347.4 233 73.4
arahy.Tifrunner.gnm1.ann1.22L7FB Arachis hypogaea HOM05D007177 ORTHO05D008984 5.3e-93 345.1 297 62.6
Prupe.1G466600 Prunus persica HOM05D007177 ORTHO05D008984 3.4e-92 342.4 252 71.0
COL.COLO4_24067 Corchorus olitorius HOM05D007177 ORTHO05D008984 1.1e-90 337.4 263 67.3
FAN15G3007 Fragaria x ananassa HOM05D007177 ORTHO05D008984 5.4e-90 335.1 266 66.2
FAN20G1087 Fragaria x ananassa HOM05D007177 ORTHO05D008984 1.2e-89 334.0 266 65.8
Glyma.04G072300 Glycine max HOM05D007177 ORTHO05D008984 1.6e-89 333.6 277 63.2
PGR102G2243 Punica granatum HOM05D007177 ORTHO05D008984 1.1e-87 327.4 303 60.7
Psat5g027720 Pisum sativum HOM05D007177 ORTHO05D008984 1.9e-87 326.6 210 71.9
Aqoxy7G01836 Aquilegia oxysepala HOM05D007177 ORTHO05D008984 1.2e-84 317.4 229 69.9
Cfa013211 Carpinus fangiana HOM05D007177 ORTHO05D008984 9.6e-79 297.7 158 94.9
ATR0037G062 Amborella trichopoda HOM05D007177 ORTHO05D008984 3.7e-78 295.8 182 77.5
Pp3c27_2770 Physcomitrium patens HOM05D007177 ORTHO05D008984 1.2e-76 290.8 263 57.0
AUR62011224 Chenopodium quinoa HOM05D007177 ORTHO05D008984 4.2e-74 282.3 280 54.6
SGA_v2.0_scaffold27G11496 Striga asiatica HOM05D007177 ORTHO05D008984 5.5e-74 282.0 228 68.0
EL10Ac2g02536 Beta vulgaris HOM05D007177 ORTHO05D008984 2.1e-73 280.0 310 50.6
Ca_15697_v3 Cicer arietinum L. HOM05D007177 ORTHO05D008984 1.8e-72 276.9 203 70.0
Mapoly0103s0019 Marchantia polymorpha HOM05D007177 ORTHO05D008984 1.4e-69 267.3 255 54.5
Sc23g0007000 Simmondsia chinensis HOM05D007177 ORTHO05D008984 1.1e-58 231.1 176 67.6
Gohir.D06G048101 Gossypium hirsutum HOM05D007177 ORTHO05D008984 2.0e-44 183.7 100 83.0
SEGI_07055 Sequoiadendron giganteum HOM05D007177 ORTHO05D008984 4.5e-44 182.6 130 67.7
Cre07.g328200 Chlamydomonas reinhardtii HOM05D007177 ORTHO05D008984 4.5e-36 156.0 209 41.6
Hma1.2p1_0175F.1_g077230 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 2.9e-35 153.3 107 70.1
MCO07G393 Micromonas commoda HOM05D007177 ORTHO05D008984 1.1e-26 124.8 202 35.6
Actinidia13424 Actinidia chinensis HOM05D007177 ORTHO05D008984 1.2e-12 78.2 56 73.2
AagrBONN_evm.TU.Sc2ySwM_117.3794 Anthoceros agrestis HOM05D007177 ORTHO05D008984 1.3e-11 74.7 103 40.8
PGR142G2901 Punica granatum HOM05D002933 ORTHO05D007742 2.0e-07 60.8 234 22.6
Lj1g0025916 Lotus japonicus HOM05D002933 ORTHO05D007742 4.4e-07 59.7 226 20.8


User provided reference genes

Program Settings