Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p022862 Quercus lobata HOM05D001120 ORTHO05D002943 1.6e-205 719.2 355 100.0
QL08p051844 Quercus lobata HOM05D001120 ORTHO05D002943 4.7e-48 196.1 385 37.9
QL08p051863 Quercus lobata HOM05D001120 ORTHO05D002943 2.7e-27 127.1 270 35.6
COL.COLO4_33196 Corchorus olitorius HOM05D001120 ORTHO05D002943 5.1e-26 122.9 297 33.7
COL.COLO4_05156 Corchorus olitorius HOM05D001120 ORTHO05D002943 1.6e-24 117.9 305 32.1
Cfa008242 Carpinus fangiana HOM05D001120 ORTHO05D004313 6.9e-23 112.5 333 29.4
TAR375G0839 Trochodendron aralioides HOM05D001120 ORTHO05D002943 9.0e-23 112.1 329 28.6
Cpa.g.sc3.252 Carica papaya HOM05D001120 ORTHO05D002943 1.5e-22 111.3 327 29.4
Gohir.A07G039900 Gossypium hirsutum HOM05D001120 ORTHO05D002943 1.5e-22 111.3 344 29.1
Haze_13809 Corylus avellana HOM05D001120 ORTHO05D002943 2.6e-22 110.5 323 28.8
Medtr6g463380 Medicago truncatula HOM05D001120 ORTHO05D002943 5.8e-22 109.4 328 27.7
Sc19g0001810 Simmondsia chinensis HOM05D001120 ORTHO05D002943 7.6e-22 109.0 330 28.5
Medtr3g006860 Medicago truncatula HOM05D001120 ORTHO05D002943 1.3e-21 108.2 328 29.3
A10p09590 Brassica napus HOM05D001120 ORTHO05D002943 1.7e-21 107.8 396 27.8
Actinidia13529 Actinidia chinensis HOM05D001120 ORTHO05D002943 2.9e-21 107.1 334 28.4
Duzib084G0753 Durio zibethinus HOM05D001120 ORTHO05D002943 2.9e-21 107.1 328 28.4
FvH4_7g28430 Fragaria vesca HOM05D001120 ORTHO05D002943 2.9e-21 107.1 311 30.2
MELO3C006846.2 Cucumis melo HOM05D001120 ORTHO05D002943 3.8e-21 106.7 338 28.4
Thhalv10013554m.g Eutrema salsugineum HOM05D001120 ORTHO05D002943 3.8e-21 106.7 326 29.4
arahy.Tifrunner.gnm1.ann1.X1WI1D Arachis hypogaea HOM05D001120 ORTHO05D002943 4.9e-21 106.3 314 27.1
EL10Ac3g05764 Beta vulgaris HOM05D001120 ORTHO05D002943 4.9e-21 106.3 328 29.0
COL.COLO4_30184 Corchorus olitorius HOM05D001120 ORTHO05D002943 6.4e-21 105.9 219 37.0
Glyma.09G151800 Glycine max HOM05D001120 ORTHO05D002943 6.4e-21 105.9 347 28.2
Gorai.001G047100 Gossypium raimondii HOM05D001120 ORTHO05D002943 6.4e-21 105.9 328 30.8
Lsat_1_v5_gn_8_157341 Lactuca sativa HOM05D001120 ORTHO05D002943 6.4e-21 105.9 351 28.2
Eucgr.A02865 Eucalyptus grandis HOM05D001120 ORTHO05D002943 1.1e-20 105.1 305 29.2
Lj2g0010051 Lotus japonicus HOM05D001120 ORTHO05D002943 1.4e-20 104.8 342 28.7
Lsat_1_v5_gn_8_7961 Lactuca sativa HOM05D001120 ORTHO05D002943 1.9e-20 104.4 388 27.1
Lj6g0021937 Lotus japonicus HOM05D001120 ORTHO05D002943 1.9e-20 104.4 317 28.7
Hund04661 Selenicereus undatus HOM05D001120 ORTHO05D002943 1.9e-20 104.4 326 29.4
VMungo0464G0810 Vigna mungo HOM05D001120 ORTHO05D002943 1.9e-20 104.4 304 28.6
BcaC04g20640 Brassica carinata HOM05D001120 ORTHO05D002943 2.4e-20 104.0 328 29.0
C09p41150 Brassica napus HOM05D001120 ORTHO05D002943 2.4e-20 104.0 328 29.0
BolC9t56993H Brassica oleracea HOM05D001120 ORTHO05D002943 2.4e-20 104.0 328 29.0
FAN06G4681 Fragaria x ananassa HOM05D001120 ORTHO05D002943 2.4e-20 104.0 353 28.9
ECA233G6122 Erigeron canadensis HOM05D001120 ORTHO05D002943 3.2e-20 103.6 321 29.9
Psat1g105640 Pisum sativum HOM05D001120 ORTHO05D002943 3.2e-20 103.6 306 29.1
Rhsim07G0025300 Rhododendron simsii HOM05D001120 ORTHO05D002943 3.2e-20 103.6 337 28.5
MBI12_g37712_MAGBIO Magnolia biondii HOM05D001120 ORTHO05D002943 4.2e-20 103.2 327 28.1
PSO210G7235 Papaver somniferum HOM05D001120 ORTHO05D002943 5.4e-20 102.8 252 30.6
Phvul.004G125600 Phaseolus vulgaris HOM05D001120 ORTHO05D002943 5.4e-20 102.8 343 28.0
THA.LOC104806528 Tarenaya hassleriana HOM05D001120 ORTHO05D002943 5.4e-20 102.8 333 27.6
BcaB08g35521 Brassica carinata HOM05D001120 ORTHO05D002943 7.1e-20 102.4 328 29.0
Lalb_Chr25g0289251 Lupinus albus HOM05D001120 ORTHO05D002943 7.1e-20 102.4 331 27.8
Peaxi162Scf00192g00835 Petunia axillaris HOM05D001120 ORTHO05D002943 7.1e-20 102.4 324 25.9
ClCG05G007580 Citrullus lanatus HOM05D001120 ORTHO05D002943 9.3e-20 102.1 342 28.9
Gohir.A09G178700 Gossypium hirsutum HOM05D001120 ORTHO05D002943 9.3e-20 102.1 326 27.0
Gohir.D09G174300 Gossypium hirsutum HOM05D001120 ORTHO05D002943 9.3e-20 102.1 326 26.7
Gorai.006G196300 Gossypium raimondii HOM05D001120 ORTHO05D002943 9.3e-20 102.1 326 26.7
Sopen03g003000 Solanum pennellii HOM05D001120 ORTHO05D002943 9.3e-20 102.1 316 25.9
Solyc03g007000.4 Solanum lycopersicum HOM05D001120 ORTHO05D002943 1.2e-19 101.7 316 25.9
PGSC0003DMG400031017 Solanum tuberosum HOM05D001120 ORTHO05D002943 1.2e-19 101.7 316 25.9
Ciclev10004987m.g Citrus clementina HOM05D001120 ORTHO05D002943 1.6e-19 101.3 336 28.0
Hma1.2p1_0488F.1_g163780 Hydrangea macrophylla HOM05D001120 ORTHO05D002943 1.6e-19 101.3 323 28.2
Gohir.D07G044000 Gossypium hirsutum HOM05D001120 ORTHO05D002943 2.1e-19 100.9 317 30.9
MSTRG.27147 Avicennia marina HOM05D001120 ORTHO05D002943 2.7e-19 100.5 327 26.0
Prupe.2G284300 Prunus persica HOM05D001120 ORTHO05D002943 2.7e-19 100.5 414 25.8
CSS0048489 Camellia sinensis var. sinensis HOM05D001120 ORTHO05D002943 3.5e-19 100.1 385 26.2
Carub.0008s1176 Capsella rubella HOM05D001120 ORTHO05D002943 3.5e-19 100.1 330 28.5
CAN.G1409.5 Capsicum annuum HOM05D001120 ORTHO05D002943 3.5e-19 100.1 317 26.5
Cc02_g03730 Coffea canephora HOM05D001120 ORTHO05D002943 3.5e-19 100.1 329 27.4
HanXRQChr05g0141341 Helianthus annuus HOM05D001120 ORTHO05D002943 3.5e-19 100.1 292 29.1
PGR042G0858 Punica granatum HOM05D001120 ORTHO05D002943 3.5e-19 100.1 327 27.5
TWI23G0697 Tripterygium wilfordii HOM05D001120 ORTHO05D002943 3.5e-19 100.1 327 28.7
Aa31LG3G8190 Aethionema arabicum HOM05D001120 ORTHO05D002943 4.6e-19 99.8 328 27.4
CiPaw.03G098500 Carya illinoinensis HOM05D001120 ORTHO05D002943 4.6e-19 99.8 316 26.3
Ca_19532_v3 Cicer arietinum L. HOM05D001120 ORTHO05D002943 4.6e-19 99.8 321 28.3
Sed0024680 Sechium edule HOM05D001120 ORTHO05D002943 4.6e-19 99.8 332 29.2
AT5G51740 Arabidopsis thaliana HOM05D001120 ORTHO05D002943 6.0e-19 99.4 328 28.4
Dinv08003 Davidia involucrata HOM05D001120 ORTHO05D002943 6.0e-19 99.4 289 28.7
Thecc.03G163900 Theobroma cacao HOM05D001120 ORTHO05D002943 7.9e-19 99.0 325 30.2
Ah.13g067550 Amaranthus hybridus HOM05D001120 ORTHO05D002943 1.0e-18 98.6 327 29.4
AL8G26010 Arabidopsis lyrata HOM05D001120 ORTHO05D002943 1.0e-18 98.6 336 28.0
CARHR264600 Cardamine hirsuta HOM05D001120 ORTHO05D002943 1.0e-18 98.6 399 26.1
Manes.06G139500 Manihot esculenta HOM05D001120 ORTHO05D002943 1.7e-18 97.8 334 28.1
arahy.Tifrunner.gnm1.ann1.0ZDL97 Arachis hypogaea HOM05D001120 ORTHO05D002943 2.3e-18 97.4 343 26.2
CANSAT21G0609 Cannabis sativa HOM05D001120 ORTHO05D002943 2.3e-18 97.4 330 27.0
CANSAT21G2509 Cannabis sativa HOM05D001120 ORTHO05D002943 2.3e-18 97.4 330 27.0
CDE11G0287 Ceratophyllum demersum HOM05D001120 ORTHO05D002943 2.3e-18 97.4 328 27.1
Dinv28521 Davidia involucrata HOM05D001120 ORTHO05D002943 2.3e-18 97.4 331 26.6
PSO832G4332 Papaver somniferum HOM05D001120 ORTHO05D002943 3.0e-18 97.1 308 26.0
PSO782G3773 Papaver somniferum HOM05D001120 ORTHO05D002943 3.9e-18 96.7 335 27.8
Nitab4.5_0000072g0150 Nicotiana tabacum HOM05D001120 ORTHO05D002943 5.1e-18 96.3 318 25.8
Potri.012G131100 Populus trichocarpa HOM05D001120 ORTHO05D002943 5.1e-18 96.3 303 27.7
arahy.Tifrunner.gnm1.ann1.16TVZ1 Arachis hypogaea HOM05D001120 ORTHO05D002943 6.6e-18 95.9 343 25.9
Nitab4.5_0006353g0020 Nicotiana tabacum HOM05D001120 ORTHO05D002943 6.6e-18 95.9 319 26.0
Hund11789 Selenicereus undatus HOM05D001120 ORTHO05D002943 6.6e-18 95.9 328 28.4
AUR62021289 Chenopodium quinoa HOM05D001120 ORTHO05D002943 1.1e-17 95.1 326 27.9
Migut.F01165 Erythranthe guttata HOM05D001120 ORTHO05D002943 1.5e-17 94.7 330 25.8
Rhsim03G0173300 Rhododendron simsii HOM05D001120 ORTHO05D002943 1.5e-17 94.7 331 25.7
THA.LOC104825078 Tarenaya hassleriana HOM05D001120 ORTHO05D002943 1.5e-17 94.7 292 29.5
Glyma.06G289600 Glycine max HOM05D001120 ORTHO05D002943 1.9e-17 94.4 328 27.7
Hma1.2p1_0033F.1_g020890 Hydrangea macrophylla HOM05D001120 ORTHO05D002943 1.9e-17 94.4 235 30.2
FAN10G1418 Fragaria x ananassa HOM05D001120 ORTHO05D002943 2.5e-17 94.0 324 26.9
THA.LOC104811503 Tarenaya hassleriana HOM05D001120 ORTHO05D002943 2.5e-17 94.0 320 27.2
THA.LOC104825079 Tarenaya hassleriana HOM05D001120 ORTHO05D002943 2.5e-17 94.0 303 30.4
FAN06G3100 Fragaria x ananassa HOM05D001120 ORTHO05D002943 4.3e-17 93.2 324 26.9
PSO478G4258 Papaver somniferum HOM05D001120 ORTHO05D002943 5.6e-17 92.8 345 26.7
VMungo1127G0245 Vigna mungo HOM05D001120 ORTHO05D002943 5.6e-17 92.8 333 27.3
COL.COLO4_14203 Corchorus olitorius HOM05D001120 ORTHO05D004313 9.6e-17 92.0 331 27.2
PSO478G1970 Papaver somniferum HOM05D001120 ORTHO05D002943 9.6e-17 92.0 339 26.5
FAN01G0606 Fragaria x ananassa HOM05D001120 ORTHO05D002943 1.3e-16 91.7 326 26.4
RcHm_v2.0_Chr1g0375401 Rosa chinensis HOM05D001120 ORTHO05D002943 1.3e-16 91.7 321 26.8
ATR0757G141 Amborella trichopoda HOM05D001120 ORTHO05D002943 1.6e-16 91.3 334 25.7
FAN03G1927 Fragaria x ananassa HOM05D001120 ORTHO05D002943 1.6e-16 91.3 329 26.1
Rhsim09G0194100 Rhododendron simsii HOM05D001120 ORTHO05D002943 1.6e-16 91.3 288 27.1
Os02g0735100 Oryza sativa ssp. japonica HOM05D001120 ORTHO05D002943 2.1e-16 90.9 331 26.3
Rhsim05G0178800 Rhododendron simsii HOM05D001120 ORTHO05D002943 2.1e-16 90.9 310 29.0
FAN03G1503 Fragaria x ananassa HOM05D001120 ORTHO05D002943 2.8e-16 90.5 329 26.1
QL12p023764 Quercus lobata HOM05D001120 ORTHO05D337170 2.8e-16 90.5 101 54.5
unitig_52.g17752 Utricularia gibba HOM05D001120 ORTHO05D002943 3.6e-16 90.1 318 25.8
DCAR_007088 Daucus carota HOM05D001120 ORTHO05D002943 4.8e-16 89.7 223 30.0
MD01G1187900 Malus domestica HOM05D001120 ORTHO05D002943 4.8e-16 89.7 377 24.7
PSO782G1143 Papaver somniferum HOM05D001120 ORTHO05D002943 4.8e-16 89.7 331 26.6
DCAR_018133 Daucus carota HOM05D001120 ORTHO05D002943 6.2e-16 89.4 324 25.9
Sabra12G0098600 Salix brachista HOM05D001120 ORTHO05D004313 8.1e-16 89.0 375 25.9
vmacro13381 Vaccinium macrocarpon HOM05D001120 ORTHO05D002943 1.1e-15 88.6 295 28.5
FAN06G2540 Fragaria x ananassa HOM05D001120 ORTHO05D002943 1.4e-15 88.2 345 27.5
SGA_v2.0_scaffold10G05437 Striga asiatica HOM05D001120 ORTHO05D002943 1.4e-15 88.2 341 26.4
THA.LOC104825082 Tarenaya hassleriana HOM05D001120 ORTHO05D002943 1.4e-15 88.2 310 28.7
arahy.Tifrunner.gnm1.ann1.35XLXM Arachis hypogaea HOM05D001120 ORTHO05D002943 1.8e-15 87.8 318 26.1
FAN06G0604 Fragaria x ananassa HOM05D001120 ORTHO05D002943 1.8e-15 87.8 331 27.2
THA.LOC104798865 Tarenaya hassleriana HOM05D001120 ORTHO05D002943 1.8e-15 87.8 302 27.8
Rhsim07G0025100 Rhododendron simsii HOM05D001120 ORTHO05D002943 2.4e-15 87.4 289 29.1
Medtr6g079410 Medicago truncatula HOM05D001120 ORTHO05D002943 4.0e-15 86.7 280 28.9
FAN10G3067 Fragaria x ananassa HOM05D001120 ORTHO05D002943 6.9e-15 85.9 301 27.9
FAN06G0193 Fragaria x ananassa HOM05D001120 ORTHO05D002943 1.2e-14 85.1 268 29.1
GSVIVG01018475001 Vitis vinifera HOM05D001120 ORTHO05D002943 1.2e-14 85.1 189 32.8
FAN06G2717 Fragaria x ananassa HOM05D001120 ORTHO05D002943 1.5e-14 84.7 353 26.6
arahy.Tifrunner.gnm1.ann1.W17802 Arachis hypogaea HOM05D001120 ORTHO05D002943 3.4e-14 83.6 318 25.8
Medtr6g061650 Medicago truncatula HOM05D001120 ORTHO05D002943 3.4e-14 83.6 267 30.0
HPP92_007982 Vanilla planifolia HOM05D001120 ORTHO05D002943 3.4e-14 83.6 336 26.8
Pp3c23_3440 Physcomitrium patens HOM05D001120 ORTHO05D002943 4.5e-14 83.2 290 27.2
Rhsim07G0024900 Rhododendron simsii HOM05D001120 ORTHO05D002943 4.5e-14 83.2 302 28.1
COL.COLO4_12579 Corchorus olitorius HOM05D001120 ORTHO05D002943 5.8e-14 82.8 383 25.8
FvH4_7g28432 Fragaria vesca HOM05D001120 ORTHO05D002943 7.6e-14 82.4 298 28.5
Lj8C35G5 Lonicera japonica HOM05D001120 ORTHO05D002943 7.6e-14 82.4 333 25.2
Phvul.011G124600 Phaseolus vulgaris HOM05D001120 ORTHO05D002943 7.6e-14 82.4 231 30.7
Aqoxy7G00546 Aquilegia oxysepala HOM05D001120 ORTHO05D002943 1.3e-13 81.6 329 24.9
MD07G1260500 Malus domestica HOM05D001120 ORTHO05D002943 2.2e-13 80.9 292 25.3
Eucgr.A02866 Eucalyptus grandis HOM05D001120 ORTHO05D002943 6.4e-13 79.3 264 29.2
Aqoxy5G03734 Aquilegia oxysepala HOM05D001120 ORTHO05D002943 8.4e-13 79.0 300 28.0
COL.COLO4_03392 Corchorus olitorius HOM05D001120 ORTHO05D002943 5.5e-12 76.3 147 38.1
QL12p039198 Quercus lobata HOM05D001120 ORTHO05D002943 7.1e-12 75.9 218 27.5
BraA10t43035Z Brassica rapa HOM05D001120 ORTHO05D002943 9.3e-12 75.5 288 27.8
AUR62016080 Chenopodium quinoa HOM05D001120 ORTHO05D002943 3.5e-11 73.6 202 29.7
vmacro06756 Vaccinium macrocarpon HOM05D001120 ORTHO05D002943 3.5e-11 73.6 221 29.0
Nn1g01163 Nelumbo nucifera HOM05D001120 ORTHO05D002943 6.0e-11 72.8 221 28.1
unitig_92.g28179 Utricularia gibba HOM05D001120 ORTHO05D002943 1.0e-10 72.0 134 38.1
unitig_92.g28224 Utricularia gibba HOM05D001120 ORTHO05D002943 1.0e-10 72.0 134 38.1
Rhsim07G0026200 Rhododendron simsii HOM05D001120 ORTHO05D002943 1.3e-10 71.6 293 24.9
Mapoly0030s0021 Marchantia polymorpha HOM05D001120 ORTHO05D002943 1.8e-10 71.2 297 26.3
Medtr1g014390 Medicago truncatula HOM05D001120 ORTHO05D002943 1.8e-10 71.2 297 23.9
Oeu021740.1 Olea europaea HOM05D001120 ORTHO05D002943 5.1e-10 69.7 218 30.7
CsaV3_3G016470 Cucumis sativus L. HOM05D001120 ORTHO05D002943 6.7e-10 69.3 212 29.7
CSS0024775 Camellia sinensis var. sinensis HOM05D001120 ORTHO05D002943 4.3e-09 66.6 218 27.5
Ca_19538_v3 Cicer arietinum L. HOM05D001120 ORTHO05D002943 5.6e-09 66.2 182 27.5
Glyma.12G117400 Glycine max HOM05D001120 ORTHO05D002943 9.6e-09 65.5 223 28.3
AagrBONN_evm.TU.Sc2ySwM_117.1247 Anthoceros agrestis HOM05D001120 ORTHO05D002943 1.3e-08 65.1 315 23.2
Ca_19537_v3 Cicer arietinum L. HOM05D001120 ORTHO05D002943 2.8e-08 63.9 171 27.5
SGA_v2.0_scaffold43G16464 Striga asiatica HOM05D001120 ORTHO05D002943 2.8e-08 63.9 323 25.1
ECA233G0610 Erigeron canadensis HOM05D001120 ORTHO05D002943 4.8e-08 63.2 229 25.8
FvH4_7g28431 Fragaria vesca HOM05D001120 ORTHO05D002943 4.8e-08 63.2 217 27.2
PSO478G1088 Papaver somniferum HOM05D001120 ORTHO05D002943 4.8e-08 63.2 225 26.7
SMO172G0194 Selaginella moellendorffii HOM05D001120 ORTHO05D002943 6.2e-08 62.8 291 23.4
HanXRQChr04g0116241 Helianthus annuus HOM05D001120 ORTHO05D002943 8.1e-08 62.4 257 24.1
SGA_v2.0_scaffold14G06826 Striga asiatica HOM05D001120 ORTHO05D002943 8.1e-08 62.4 264 26.9
COL.COLO4_33195 Corchorus olitorius HOM05D001120 ORTHO05D002943 1.1e-07 62.0 144 34.7
vmacro09881 Vaccinium macrocarpon HOM05D001120 ORTHO05D002943 1.1e-07 62.0 225 25.8
COL.COLO4_05155 Corchorus olitorius HOM05D001120 ORTHO05D002943 3.1e-07 60.5 105 40.0
HanXRQChr02g0052421 Helianthus annuus HOM05D001120 ORTHO05D002943 3.1e-07 60.5 137 33.6
CBR_g433 Chara braunii HOM05D001120 ORTHO05D002943 4.0e-07 60.1 317 24.3
RcHm_v2.0_Chr1g0375411 Rosa chinensis HOM05D001120 ORTHO05D002943 6.9e-07 59.3 101 31.7
arahy.Tifrunner.gnm1.ann1.Q1XR2M Arachis hypogaea HOM05D001120 ORTHO05D002943 9.0e-07 58.9 98 35.7
CSS0048333 Camellia sinensis var. sinensis HOM05D001120 ORTHO05D002943 1.2e-06 58.5 263 25.9
FAN01G2995 Fragaria x ananassa HOM05D000032 ORTHO05D004313 1.2e-06 58.5 132 31.8
EL10Ac3g05118 Beta vulgaris HOM05D001120 ORTHO05D002943 1.5e-06 58.2 177 28.2
Medtr6g006850 Medicago truncatula HOM05D001120 ORTHO05D002943 1.5e-06 58.2 252 25.8
unitig_92.g28221 Utricularia gibba HOM05D001120 ORTHO05D002943 2.6e-06 57.4 102 39.2
unitig_92.g28185 Utricularia gibba HOM05D001120 ORTHO05D002943 3.4e-06 57.0 220 29.1
MD07G1015000 Malus domestica HOM05D001120 ORTHO05D002943 1.0e-05 55.5 191 26.7


User provided reference genes

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