Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p022024 Quercus lobata HOM05D007546 ORTHO05D009542 3.7e-146 521.5 267 100.0
Dinv34747 Davidia involucrata HOM05D007546 ORTHO05D009542 2.0e-104 382.9 266 73.3
CSS0011141 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 6.0e-104 381.3 266 73.3
Duzib138G1282 Durio zibethinus HOM05D007546 ORTHO05D009542 1.5e-99 366.7 266 69.9
Actinidia24887 Actinidia chinensis HOM05D007546 ORTHO05D009542 6.4e-98 361.3 266 69.2
Atru.chr5.1426 Acer truncatum HOM05D007546 ORTHO05D009542 8.3e-98 360.9 268 69.0
TWI14G0110 Tripterygium wilfordii HOM05D007546 ORTHO05D009542 3.2e-97 359.0 268 68.7
Haze_04718 Corylus avellana HOM05D007546 ORTHO05D009542 2.1e-96 356.3 251 76.1
GSVIVG01011126001 Vitis vinifera HOM05D007546 ORTHO05D009542 7.8e-96 354.4 265 67.9
Gohir.D08G076500 Gossypium hirsutum HOM05D007546 ORTHO05D009542 6.2e-93 344.7 264 65.9
Sabra05G0158800 Salix brachista HOM05D007546 ORTHO05D009542 6.8e-92 341.3 264 67.8
COL.COLO4_09104 Corchorus olitorius HOM05D007546 ORTHO05D009542 2.6e-91 339.3 251 68.9
Potri.005G208700 Populus trichocarpa HOM05D007546 ORTHO05D009542 9.9e-91 337.4 264 68.6
PGR119G0241 Punica granatum HOM05D007546 ORTHO05D009542 9.9e-91 337.4 266 64.3
Gohir.A08G068100 Gossypium hirsutum HOM05D007546 ORTHO05D009542 3.7e-90 335.5 264 64.4
Hma1.2p1_0257F.1_g103530 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 3.7e-90 335.5 256 66.8
DCAR_018417 Daucus carota HOM05D007546 ORTHO05D009542 8.4e-90 334.3 266 63.2
Eucgr.H01486 Eucalyptus grandis HOM05D007546 ORTHO05D009542 8.4e-90 334.3 268 61.6
Ciclev10023872m.g Citrus clementina HOM05D007546 ORTHO05D009542 1.9e-89 333.2 251 70.5
Lsat_1_v5_gn_9_3860 Lactuca sativa HOM05D007546 ORTHO05D009542 7.1e-89 331.3 255 65.5
CsaV3_7G028190 Cucumis sativus L. HOM05D007546 ORTHO05D009542 2.3e-87 326.2 268 61.6
Nn2g12733 Nelumbo nucifera HOM05D007546 ORTHO05D009542 1.1e-86 323.9 269 61.7
Sed0013948 Sechium edule HOM05D007546 ORTHO05D009542 1.9e-86 323.2 265 61.5
MELO3C015843.2 Cucumis melo HOM05D007546 ORTHO05D009542 3.3e-86 322.4 268 61.2
Aqoxy2G03310 Aquilegia oxysepala HOM05D007546 ORTHO05D009542 7.3e-86 321.2 263 63.9
Gorai.004G081100 Gossypium raimondii HOM05D007546 ORTHO05D009542 7.3e-86 321.2 248 65.7
Thecc.01G280300 Theobroma cacao HOM05D007546 ORTHO05D009542 9.6e-86 320.9 237 68.4
vmacro14926 Vaccinium macrocarpon HOM05D007546 ORTHO05D009542 3.6e-85 318.9 258 64.7
HanXRQChr10g0282741 Helianthus annuus HOM05D007546 ORTHO05D009542 4.7e-85 318.5 266 60.9
ClCG09G006970 Citrullus lanatus HOM05D007546 ORTHO05D009542 2.4e-84 316.2 293 58.0
Lj2C1174G3 Lonicera japonica HOM05D007546 ORTHO05D009542 1.7e-82 310.1 248 64.5
MD11G1286600 Malus domestica HOM05D007546 ORTHO05D009542 7.1e-81 304.7 261 60.5
Cc01_g19550 Coffea canephora HOM05D007546 ORTHO05D009542 1.7e-79 300.1 271 59.0
VMungo1383G0744 Vigna mungo HOM05D007546 ORTHO05D009542 3.9e-79 298.9 265 57.0
Lj1g0009003 Lotus japonicus HOM05D007546 ORTHO05D009542 6.6e-79 298.1 266 58.6
MSTRG.18229 Avicennia marina HOM05D007546 ORTHO05D009542 3.3e-78 295.8 267 58.1
SalBow4G0341 Salvia bowleyana HOM05D007546 ORTHO05D009542 9.6e-78 294.3 267 58.1
Psat3g064520 Pisum sativum HOM05D007546 ORTHO05D009542 1.3e-77 293.9 266 59.0
CANSAT25G0166 Cannabis sativa HOM05D007546 ORTHO05D009542 1.6e-77 293.5 265 61.1
Prupe.8G241900 Prunus persica HOM05D007546 ORTHO05D009542 2.1e-77 293.1 269 59.9
Peaxi162Scf01622g00012 Petunia axillaris HOM05D007546 ORTHO05D009542 2.8e-77 292.7 264 55.7
Carub.0001s0232 Capsella rubella HOM05D007546 ORTHO05D009542 1.4e-76 290.4 265 57.7
Sp1g02200 Schrenkiella parvula HOM05D007546 ORTHO05D009542 1.8e-76 290.0 267 57.3
Hund05346 Selenicereus undatus HOM05D007546 ORTHO05D009542 3.1e-76 289.3 269 54.3
THA.LOC104801231 Tarenaya hassleriana HOM05D007546 ORTHO05D009542 4.0e-76 288.9 263 57.8
ECA247G1813 Erigeron canadensis HOM05D007546 ORTHO05D009542 5.3e-76 288.5 266 58.3
BraA08t35641Z Brassica rapa HOM05D005387 ORTHO05D006711 6.9e-76 288.1 266 56.0
AL1G12670 Arabidopsis lyrata HOM05D007546 ORTHO05D009542 2.0e-75 286.6 264 56.4
C08p00480 Brassica napus HOM05D005387 ORTHO05D006711 7.6e-75 284.6 259 57.1
PSO170G1280 Papaver somniferum HOM05D007546 ORTHO05D009542 2.9e-74 282.7 266 52.6
Hma1.2p1_0257F.1_g103520 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 3.8e-74 282.3 219 66.7
Thhalv10008478m.g Eutrema salsugineum HOM05D007546 ORTHO05D009542 1.4e-73 280.4 263 55.1
Medtr7g094790 Medicago truncatula HOM05D007546 ORTHO05D009542 2.4e-73 279.6 263 57.8
FvH4_2g23671 Fragaria vesca HOM05D007546 ORTHO05D009542 9.3e-73 277.7 263 55.1
SGA_v2.0_scaffold1G00465 Striga asiatica HOM05D007546 ORTHO05D009542 1.2e-72 277.3 264 56.8
MBI19_g16657_MAGBIO Magnolia biondii HOM05D007546 ORTHO05D009542 2.1e-72 276.6 260 55.8
RcHm_v2.0_Chr6g0291141 Rosa chinensis HOM05D007546 ORTHO05D009542 2.1e-72 276.6 263 57.4
arahy.Tifrunner.gnm1.ann1.N7I060 Arachis hypogaea HOM05D007546 ORTHO05D009542 6.0e-72 275.0 261 52.9
A08p37430 Brassica napus HOM05D005387 ORTHO05D006711 7.9e-72 274.6 291 51.5
AUR62036823 Chenopodium quinoa HOM05D007546 ORTHO05D009542 1.0e-71 274.2 271 53.1
arahy.Tifrunner.gnm1.ann1.99CH68 Arachis hypogaea HOM05D007546 ORTHO05D009542 1.3e-71 273.9 261 52.5
arahy.Tifrunner.gnm1.ann1.P6ZKNU Arachis hypogaea HOM05D007546 ORTHO05D009542 3.0e-71 272.7 261 52.5
Ca_08577_v3 Cicer arietinum L. HOM05D007546 ORTHO05D009542 3.0e-71 272.7 248 59.3
Migut.D00289 Erythranthe guttata HOM05D007546 ORTHO05D009542 5.1e-71 271.9 267 54.7
Aa31LG1G9350 Aethionema arabicum HOM05D007546 ORTHO05D009542 6.6e-71 271.6 258 55.8
Cpa.g.sc52.28 Carica papaya HOM05D007546 ORTHO05D009542 6.6e-71 271.6 190 73.2
Lalb_Chr01g0013761 Lupinus albus HOM05D007546 ORTHO05D009542 6.6e-71 271.6 268 53.4
EL10Ac7g17228 Beta vulgaris HOM05D007546 ORTHO05D009542 2.5e-70 269.6 274 53.3
Manes.01G208300 Manihot esculenta HOM05D007546 ORTHO05D009542 5.6e-70 268.5 207 67.1
BcaC07g36978 Brassica carinata HOM05D005387 ORTHO05D006711 1.6e-69 266.9 262 54.6
Nitab4.5_0001028g0010 Nicotiana tabacum HOM05D007546 ORTHO05D009542 4.8e-69 265.4 244 55.3
PGSC0003DMG402012883 Solanum tuberosum HOM05D007546 ORTHO05D009542 1.4e-68 263.8 263 52.9
Sopen09g026830 Solanum pennellii HOM05D007546 ORTHO05D009542 6.9e-68 261.5 263 52.1
Solyc09g065110.4 Solanum lycopersicum HOM05D007546 ORTHO05D009542 9.9e-67 257.7 263 51.3
CARHR002520 Cardamine hirsuta HOM05D007546 ORTHO05D009542 1.7e-66 256.9 229 59.4
Oeu012757.1 Olea europaea HOM05D007546 ORTHO05D009542 8.4e-66 254.6 208 61.5
AUR62038619 Chenopodium quinoa HOM05D007546 ORTHO05D009542 3.9e-63 245.7 288 47.9
TPR.G6147 Trifolium pratense HOM05D007546 ORTHO05D009542 4.0e-60 235.7 225 56.4
Os05g0251400 Oryza sativa ssp. japonica HOM05D007546 ORTHO05D009542 9.0e-60 234.6 261 46.0
FAN24G2921 Fragaria x ananassa HOM05D005331 ORTHO05D007596 1.5e-59 233.8 232 53.9
Ah.15g091950 Amaranthus hybridus HOM05D007546 ORTHO05D009542 5.8e-59 231.9 229 51.5
FAN20G2110 Fragaria x ananassa HOM05D005331 ORTHO05D007596 5.8e-59 231.9 232 53.9
HPP92_010632 Vanilla planifolia HOM05D007546 ORTHO05D009542 1.0e-58 231.1 268 46.3
unitig_61.g26331 Utricularia gibba HOM05D007546 ORTHO05D009542 2.7e-56 223.0 261 47.9
FAN15G1459 Fragaria x ananassa HOM05D005331 ORTHO05D007596 6.0e-56 221.9 259 48.6
Nitab4.5_0010448g0030 Nicotiana tabacum HOM05D007546 ORTHO05D009542 1.3e-55 220.7 244 48.8
Sc05g0004940 Simmondsia chinensis HOM05D007546 ORTHO05D009542 1.3e-55 220.7 206 54.4
Zm00001eb132020 Zea mays HOM05D007546 ORTHO05D009542 1.3e-53 214.2 261 44.1
ATR0626G078 Amborella trichopoda HOM05D007546 ORTHO05D009542 2.1e-53 213.4 238 49.2
CAN.G242.7 Capsicum annuum HOM05D007546 ORTHO05D009542 7.6e-51 204.9 209 51.7
AT1G03180 Arabidopsis thaliana HOM05D007546 ORTHO05D009542 9.3e-49 198.0 195 53.3
Glyma.03G153000 Glycine max HOM05D007546 ORTHO05D009542 2.3e-47 193.4 174 56.9
Phvul.001G150400 Phaseolus vulgaris HOM05D007546 ORTHO05D009542 1.5e-46 190.7 173 55.5
AUR62043164 Chenopodium quinoa HOM05D007546 ORTHO05D009542 1.1e-44 184.5 170 56.5
Potri.002G053801 Populus trichocarpa HOM05D007546 ORTHO05D009542 2.1e-40 170.2 141 63.8
Glyma.19G155400 Glycine max HOM05D007546 ORTHO05D009542 6.1e-24 115.5 108 52.8
CSS0034697 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 1.6e-16 90.9 85 60.0
Mapoly0002s0121 Marchantia polymorpha HOM05D007546 ORTHO05D009542 3.6e-16 89.7 258 30.6
SalBow4G3151 Salvia bowleyana HOM05D007546 ORTHO05D009542 1.5e-09 67.8 51 58.8
SalBow8G3203 Salvia bowleyana HOM05D007546 ORTHO05D009542 1.5e-09 67.8 51 58.8
Lsat_1_v5_gn_5_160321 Lactuca sativa HOM05D007546 ORTHO05D009542 2.1e-08 63.9 59 57.6
Lsat_1_v5_gn_8_136820 Lactuca sativa HOM05D007546 ORTHO05D009542 1.2e-06 58.2 43 55.8
SalBow1G5735 Salvia bowleyana HOM05D007546 ORTHO05D009542 1.2e-06 58.2 51 54.9
Sabra02G0043800 Salix brachista HOM05D005331 ORTHO05D007596 7.5e-06 55.5 91 44.0


User provided reference genes

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