Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p048256 Quercus lobata HOM05D000877 ORTHO05D006099 3.0e-119 431.8 210 100.0
QL02p078595 Quercus lobata HOM05D000877 ORTHO05D006099 4.2e-105 384.8 214 90.2
Cfa007480 Carpinus fangiana HOM05D000877 ORTHO05D006099 1.2e-94 350.1 214 81.3
Haze_14617 Corylus avellana HOM05D000877 ORTHO05D006099 2.0e-94 349.4 214 81.3
Dinv33678 Davidia involucrata HOM05D000877 ORTHO05D006099 2.0e-94 349.4 214 81.3
Actinidia06049 Actinidia chinensis HOM05D000877 ORTHO05D006099 5.4e-92 341.3 214 79.9
CiPaw.03G033300 Carya illinoinensis HOM05D000877 ORTHO05D006099 1.2e-91 340.1 215 80.0
Potri.001G350400 Populus trichocarpa HOM05D000877 ORTHO05D006099 6.6e-90 334.3 214 78.0
RhsimUnG0168300 Rhododendron simsii HOM05D000877 ORTHO05D006099 2.5e-89 332.4 214 78.5
Sabra16G0229900 Salix brachista HOM05D000877 ORTHO05D006099 5.6e-89 331.3 214 77.6
Hma1.2p1_0697F.1_g205150 Hydrangea macrophylla HOM05D000877 ORTHO05D006099 2.1e-88 329.3 214 77.1
Hma1.2p1_0849F.1_g228094 Hydrangea macrophylla HOM05D000877 ORTHO05D006099 2.1e-88 329.3 214 77.1
vmacro05784 Vaccinium macrocarpon HOM05D000877 ORTHO05D006099 2.8e-88 328.9 214 76.2
CSS0034720 Camellia sinensis var. sinensis HOM05D000877 ORTHO05D006099 6.1e-88 327.8 214 77.1
Duzib147G0134 Durio zibethinus HOM05D000877 ORTHO05D006099 6.1e-88 327.8 214 78.0
Thecc.04G066700 Theobroma cacao HOM05D000877 ORTHO05D006099 8.0e-88 327.4 213 77.9
Cc07_g02730 Coffea canephora HOM05D000877 ORTHO05D006099 1.4e-87 326.6 214 75.7
Prupe.3G276800 Prunus persica HOM05D000877 ORTHO05D006099 1.8e-87 326.2 214 75.7
Duzib264G0998 Durio zibethinus HOM05D000877 ORTHO05D006099 2.3e-87 325.9 214 77.6
COL.COLO4_29856 Corchorus olitorius HOM05D000877 ORTHO05D006099 2.6e-86 322.4 214 75.7
TAR629G3200 Trochodendron aralioides HOM05D000877 ORTHO05D006099 5.8e-86 321.2 214 76.2
MD09G1040900 Malus domestica HOM05D000877 ORTHO05D006099 7.5e-86 320.9 212 75.9
TAR371G0158 Trochodendron aralioides HOM05D000877 ORTHO05D006099 3.7e-85 318.5 214 73.8
TAR371G0342 Trochodendron aralioides HOM05D000877 ORTHO05D006099 3.7e-85 318.5 214 73.8
Eucgr.J02166 Eucalyptus grandis HOM05D000877 ORTHO05D006099 1.4e-84 316.6 214 73.8
FAN05G2327 Fragaria x ananassa HOM05D000877 ORTHO05D006099 1.9e-84 316.2 214 75.2
MD17G1042200 Malus domestica HOM05D000877 ORTHO05D006099 1.9e-84 316.2 214 72.9
Peaxi162Scf00129g00742 Petunia axillaris HOM05D000877 ORTHO05D006099 2.4e-84 315.8 214 73.4
Manes.15G179800 Manihot esculenta HOM05D000877 ORTHO05D006099 3.2e-84 315.5 214 73.8
TWI56G0224 Tripterygium wilfordii HOM05D000877 ORTHO05D006099 3.2e-84 315.5 214 75.7
Nitab4.5_0007185g0040 Nicotiana tabacum HOM05D000877 ORTHO05D006099 5.4e-84 314.7 214 72.9
Potri.017G073900 Populus trichocarpa HOM05D000877 ORTHO05D006099 1.2e-83 313.5 214 75.2
Atru.chr6.2158 Acer truncatum HOM05D000877 ORTHO05D006099 3.5e-83 312.0 212 73.6
FAN14G5633 Fragaria x ananassa HOM05D000877 ORTHO05D006099 4.6e-83 311.6 214 73.8
Lj7A407G44 Lonicera japonica HOM05D000877 ORTHO05D006099 4.6e-83 311.6 214 73.4
Oeu050233.1 Olea europaea HOM05D000877 ORTHO05D006099 4.6e-83 311.6 214 73.4
FvH4_6g49910 Fragaria vesca HOM05D000877 ORTHO05D006099 7.8e-83 310.8 214 74.3
FAN09G1274 Fragaria x ananassa HOM05D000877 ORTHO05D006099 7.8e-83 310.8 214 74.3
RcHm_v2.0_Chr2g0170081 Rosa chinensis HOM05D000877 ORTHO05D006099 1.0e-82 310.5 214 73.4
PGSC0003DMG400001394 Solanum tuberosum HOM05D000877 ORTHO05D006099 2.3e-82 309.3 212 71.2
Ciclev10014083m.g Citrus clementina HOM05D000877 ORTHO05D006099 3.9e-82 308.5 214 72.0
DCAR_011189 Daucus carota HOM05D000877 ORTHO05D006099 5.0e-82 308.1 213 71.8
Gohir.D07G224200 Gossypium hirsutum HOM05D000877 ORTHO05D006099 6.6e-82 307.8 216 74.1
Nn4g22930 Nelumbo nucifera HOM05D000877 ORTHO05D006099 6.6e-82 307.8 214 71.5
Solyc02g087290.3 Solanum lycopersicum HOM05D000877 ORTHO05D006099 8.6e-82 307.4 212 70.8
Sopen02g032050 Solanum pennellii HOM05D000877 ORTHO05D006099 8.6e-82 307.4 212 70.8
Gohir.A07G217200 Gossypium hirsutum HOM05D000877 ORTHO05D006099 5.6e-81 304.7 216 73.1
FAN02G4060 Fragaria x ananassa HOM05D000877 ORTHO05D006099 7.3e-81 304.3 214 73.4
Gohir.A09G024200 Gossypium hirsutum HOM05D000877 ORTHO05D006099 1.2e-80 303.5 214 71.5
Gorai.001G258600 Gossypium raimondii HOM05D000877 ORTHO05D006099 1.2e-80 303.5 216 73.1
Ca_04234_v3 Cicer arietinum L. HOM05D000877 ORTHO05D006099 2.8e-80 302.4 217 71.0
Migut.H00173 Erythranthe guttata HOM05D000877 ORTHO05D006099 2.8e-80 302.4 215 69.8
Glyma.13G068100 Glycine max HOM05D000877 ORTHO05D006099 6.2e-80 301.2 212 69.8
Gohir.D09G023400 Gossypium hirsutum HOM05D000877 ORTHO05D006099 6.2e-80 301.2 214 71.0
TPR.G32573 Trifolium pratense HOM05D000877 ORTHO05D006099 8.0e-80 300.8 215 71.2
Gorai.006G027500 Gossypium raimondii HOM05D000877 ORTHO05D006099 1.1e-79 300.4 214 71.0
Lj2g0013078 Lotus japonicus HOM05D000877 ORTHO05D006099 1.1e-79 300.4 212 72.6
Glyma.19G015900 Glycine max HOM05D000877 ORTHO05D006099 1.4e-79 300.1 212 69.8
Lalb_Chr06g0176531 Lupinus albus HOM05D000877 ORTHO05D006099 1.8e-79 299.7 214 69.2
PSO161G0067 Papaver somniferum HOM05D000877 ORTHO05D006099 1.5e-78 296.6 213 69.5
Psat1g078760 Pisum sativum HOM05D000877 ORTHO05D006099 1.5e-78 296.6 216 70.4
PGR083G2584 Punica granatum HOM05D000877 ORTHO05D006099 1.5e-78 296.6 214 69.2
ClCG10G014620 Citrullus lanatus HOM05D000877 ORTHO05D006099 5.8e-78 294.7 212 71.2
PSO478G2265 Papaver somniferum HOM05D000877 ORTHO05D006099 5.8e-78 294.7 213 68.5
Medtr4g071680 Medicago truncatula HOM05D000877 ORTHO05D006099 7.5e-78 294.3 213 69.5
Medtr6g008850 Medicago truncatula HOM05D000877 ORTHO05D006099 7.5e-78 294.3 213 69.5
Phvul.004G022500 Phaseolus vulgaris HOM05D000877 ORTHO05D006099 7.5e-78 294.3 212 68.9
VMungo0464G1235 Vigna mungo HOM05D000877 ORTHO05D006099 7.5e-78 294.3 211 69.7
Aqoxy3G03133 Aquilegia oxysepala HOM05D000877 ORTHO05D006099 1.3e-77 293.5 214 69.6
MSTRG.3199 Avicennia marina HOM05D000877 ORTHO05D006099 1.3e-77 293.5 214 66.4
CAN.G206.66 Capsicum annuum HOM05D000877 ORTHO05D006099 1.3e-77 293.5 213 69.0
MSTRG.23976 Avicennia marina HOM05D000877 ORTHO05D006099 2.9e-77 292.4 214 67.3
arahy.Tifrunner.gnm1.ann1.69HWTH Arachis hypogaea HOM05D000877 ORTHO05D006099 6.4e-77 291.2 212 67.5
arahy.Tifrunner.gnm1.ann1.L4IVZW Arachis hypogaea HOM05D000877 ORTHO05D006099 6.4e-77 291.2 212 67.5
CsaV3_3G041960 Cucumis sativus L. HOM05D000877 ORTHO05D006099 6.4e-77 291.2 212 68.9
MELO3C009914.2 Cucumis melo HOM05D000877 ORTHO05D006099 4.1e-76 288.5 212 67.9
ECA238G2186 Erigeron canadensis HOM05D000877 ORTHO05D006099 7.1e-76 287.7 212 67.5
Lalb_Chr02g0159851 Lupinus albus HOM05D000877 ORTHO05D006099 2.1e-75 286.2 212 67.9
AUR62014574 Chenopodium quinoa HOM05D000877 ORTHO05D006099 3.5e-75 285.4 217 67.7
Cpa.g.sc3592.1 Carica papaya HOM05D000877 ORTHO05D006099 1.0e-74 283.9 213 67.6
AUR62039387 Chenopodium quinoa HOM05D000877 ORTHO05D006099 1.0e-74 283.9 217 67.3
HanXRQChr14g0448861 Helianthus annuus HOM05D000877 ORTHO05D006099 1.7e-74 283.1 212 66.5
Hund13754 Selenicereus undatus HOM05D000877 ORTHO05D006099 1.1e-73 280.4 217 65.9
EL10Ac2g04636 Beta vulgaris HOM05D000877 ORTHO05D006099 2.5e-73 279.3 217 65.9
Ah.16g102250 Amaranthus hybridus HOM05D000877 ORTHO05D006099 4.3e-73 278.5 217 66.8
Sc11g0007990 Simmondsia chinensis HOM05D000877 ORTHO05D006099 5.6e-73 278.1 214 66.4
Sed0005677 Sechium edule HOM05D000877 ORTHO05D006099 3.6e-72 275.4 213 67.1
MBI15_g13304_MAGBIO Magnolia biondii HOM05D000877 ORTHO05D006099 3.1e-71 272.3 215 65.1
THA.LOC104821170 Tarenaya hassleriana HOM05D000877 ORTHO05D006099 2.6e-70 269.2 214 67.8
Lsat_1_v5_gn_2_90780 Lactuca sativa HOM05D000877 ORTHO05D006099 4.4e-70 268.5 217 64.5
Hund16097 Selenicereus undatus HOM05D000877 ORTHO05D006099 7.5e-70 267.7 219 64.4
Os06g0245700 Oryza sativa ssp. japonica HOM05D000877 ORTHO05D006099 1.1e-68 263.8 211 59.7
Zm00001eb371770 Zea mays HOM05D000877 ORTHO05D006099 1.1e-68 263.8 211 59.2
Zm00001eb280070 Zea mays HOM05D000877 ORTHO05D006099 5.4e-68 261.5 211 59.7
HPP92_010829 Vanilla planifolia HOM05D000877 ORTHO05D006099 1.3e-66 256.9 211 60.7
Sp6g29100 Schrenkiella parvula HOM05D000877 ORTHO05D006099 3.9e-66 255.4 220 63.6
CDE07G0682 Ceratophyllum demersum HOM05D000877 ORTHO05D006099 6.6e-66 254.6 213 61.0
Carub.0006s1311 Capsella rubella HOM05D000877 ORTHO05D006099 8.6e-66 254.2 221 63.8
CDE04G3424 Ceratophyllum demersum HOM05D000877 ORTHO05D006099 1.5e-65 253.4 213 60.6
BraA02t05252Z Brassica rapa HOM05D000877 ORTHO05D006099 4.3e-65 251.9 217 63.6
Thhalv10012487m.g Eutrema salsugineum HOM05D000877 ORTHO05D006099 7.3e-65 251.1 220 63.6
C02p07410 Brassica napus HOM05D000877 ORTHO05D006099 9.6e-65 250.8 216 63.4
BolC2t06672H Brassica oleracea HOM05D000877 ORTHO05D006099 9.6e-65 250.8 216 63.4
AL6G25740 Arabidopsis lyrata HOM05D000877 ORTHO05D006099 1.6e-64 250.0 220 63.2
SGA_v2.0_scaffold135G34823 Striga asiatica HOM05D000877 ORTHO05D006099 3.6e-64 248.8 209 62.2
AT5G14950 Arabidopsis thaliana HOM05D000877 ORTHO05D006099 1.4e-63 246.9 220 62.3
unitig_699.g19885 Utricularia gibba HOM05D000877 ORTHO05D006099 6.8e-63 244.6 192 60.4
CARHR198360 Cardamine hirsuta HOM05D000877 ORTHO05D006099 1.5e-62 243.4 220 62.3
Aa31LG11G14550 Aethionema arabicum HOM05D000877 ORTHO05D006099 7.6e-62 241.1 212 60.8
A03p06880 Brassica napus HOM05D000877 ORTHO05D006099 7.6e-62 241.1 217 63.6
Dinv35009 Davidia involucrata HOM05D000877 ORTHO05D006099 8.4e-61 237.7 164 72.0
BolC3t13286H Brassica oleracea HOM05D000877 ORTHO05D006099 1.2e-59 233.8 217 61.8
ATR0712G127 Amborella trichopoda HOM05D000877 ORTHO05D006099 2.7e-59 232.6 217 57.1
C03p07880 Brassica napus HOM05D000877 ORTHO05D006099 4.6e-59 231.9 217 61.8
BraA03t10011Z Brassica rapa HOM05D000877 ORTHO05D006099 1.7e-58 229.9 218 61.0
SEGI_10281 Sequoiadendron giganteum HOM05D000877 ORTHO05D006099 8.1e-56 221.1 220 52.7
SEGI_27946 Sequoiadendron giganteum HOM05D000877 ORTHO05D006099 8.1e-56 221.1 220 52.7
GSVIVG01032586001 Vitis vinifera HOM05D000877 ORTHO05D006099 2.7e-51 206.1 212 57.1
A02p02790 Brassica napus HOM05D000877 ORTHO05D006099 8.7e-50 201.1 177 61.6
BcaB01g05088 Brassica carinata HOM05D000877 ORTHO05D006099 5.8e-46 188.3 214 52.8
SMO196G0126 Selaginella moellendorffii HOM05D000877 ORTHO05D006099 6.5e-37 158.3 212 47.6
AagrBONN_evm.TU.Sc2ySwM_228.1569 Anthoceros agrestis HOM05D000877 ORTHO05D006099 2.3e-34 149.8 220 40.5
Mapoly0060s0008 Marchantia polymorpha HOM05D000877 ORTHO05D006099 2.1e-32 143.3 227 39.2
Nn1g00845 Nelumbo nucifera HOM05D000877 ORTHO05D006099 3.4e-30 136.0 155 50.3
Pp3c23_10010 Physcomitrium patens HOM05D000877 ORTHO05D006099 9.0e-23 111.3 235 34.5
CSS0011412 Camellia sinensis var. sinensis HOM05D000877 ORTHO05D006099 1.6e-11 73.9 42 83.3
CBR_g22451 Chara braunii HOM05D000877 ORTHO05D006099 7.0e-07 58.5 119 32.8


User provided reference genes

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