Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p026785 Quercus lobata HOM05D003612 ORTHO05D004323 5.4e-150 534.3 263 100.0
QL07p002913 Quercus lobata HOM05D003612 ORTHO05D004323 2.5e-139 498.8 263 93.5
Cfa016791 Carpinus fangiana HOM05D003612 ORTHO05D004323 1.2e-117 426.8 263 79.5
CiPaw.09G039700 Carya illinoinensis HOM05D003612 ORTHO05D004323 1.2e-109 400.2 263 74.9
Haze_19817 Corylus avellana HOM05D003612 ORTHO05D004323 2.9e-103 379.0 270 71.9
Haze_19820 Corylus avellana HOM05D003612 ORTHO05D004323 2.5e-102 375.9 269 71.7
Dinv02797 Davidia involucrata HOM05D003612 ORTHO05D004323 1.2e-88 330.5 267 64.8
Gorai.002G227800 Gossypium raimondii HOM05D003612 ORTHO05D004323 1.0e-84 317.4 267 58.4
Ciclev10005938m.g Citrus clementina HOM05D003612 ORTHO05D004323 4.4e-83 312.0 273 61.2
Dinv39651 Davidia involucrata HOM05D003612 ORTHO05D004323 7.5e-83 311.2 268 61.6
Gohir.A01G194000 Gossypium hirsutum HOM05D003612 ORTHO05D004323 1.3e-82 310.5 267 58.4
Prupe.7G055000 Prunus persica HOM05D003612 ORTHO05D004323 4.8e-82 308.5 269 61.3
CSS0036075 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 1.6e-80 303.5 267 59.6
Manes.04G104200 Manihot esculenta HOM05D003612 ORTHO05D004323 2.7e-80 302.8 268 57.5
Lj2A386T88 Lonicera japonica HOM05D003612 ORTHO05D004323 4.5e-80 302.0 267 58.1
COL.COLO4_19254 Corchorus olitorius HOM05D003612 ORTHO05D004323 2.9e-79 299.3 267 56.9
RcHm_v2.0_Chr3g0483371 Rosa chinensis HOM05D003612 ORTHO05D004323 2.9e-79 299.3 270 57.4
GSVIVG01033242001 Vitis vinifera HOM05D003612 ORTHO05D004323 5.0e-79 298.5 255 62.0
CsaV3_4G027280 Cucumis sativus L. HOM05D003612 ORTHO05D004323 6.5e-79 298.1 270 56.3
ClCG04G006280 Citrullus lanatus HOM05D003612 ORTHO05D004323 8.5e-79 297.7 268 56.7
COL.COLO4_22302 Corchorus olitorius HOM05D003612 ORTHO05D004323 8.5e-79 297.7 267 57.3
Sabra17G0119100 Salix brachista HOM05D003612 ORTHO05D004323 8.5e-79 297.7 268 56.0
Potri.017G142200 Populus trichocarpa HOM05D003612 ORTHO05D004323 1.9e-78 296.6 263 56.3
CANSAT80G2682 Cannabis sativa HOM05D003612 ORTHO05D004323 3.6e-77 292.4 267 54.7
TPR.G6202 Trifolium pratense HOM05D003612 ORTHO05D004323 4.7e-77 292.0 269 55.4
Rhsim04G0105800 Rhododendron simsii HOM05D003612 ORTHO05D004323 6.1e-77 291.6 267 57.7
Eucgr.A02322 Eucalyptus grandis HOM05D003612 ORTHO05D004323 8.0e-77 291.2 267 57.7
MELO3C025231.2 Cucumis melo HOM05D003612 ORTHO05D004323 1.0e-76 290.8 270 55.2
Eucgr.B02734 Eucalyptus grandis HOM05D003612 ORTHO05D004323 1.8e-76 290.0 267 57.3
FAN02G1760 Fragaria x ananassa HOM05D003612 ORTHO05D004323 1.8e-76 290.0 245 58.4
arahy.Tifrunner.gnm1.ann1.65NHSX Arachis hypogaea HOM05D003612 ORTHO05D004323 2.3e-76 289.7 268 57.8
arahy.Tifrunner.gnm1.ann1.GM1CB9 Arachis hypogaea HOM05D003612 ORTHO05D004323 2.3e-76 289.7 268 57.8
MD12G1080400 Malus domestica HOM05D003612 ORTHO05D004323 2.3e-76 289.7 267 56.9
FAN09G3838 Fragaria x ananassa HOM05D003395 ORTHO05D004087 8.8e-76 287.7 256 57.8
VMungo1309G0648 Vigna mungo HOM05D003612 ORTHO05D004323 8.8e-76 287.7 267 54.3
Hund23474 Selenicereus undatus HOM05D003612 ORTHO05D004323 5.7e-75 285.0 267 56.6
Medtr8g090105 Medicago truncatula HOM05D003612 ORTHO05D004323 1.7e-74 283.5 269 53.2
Sed0024079 Sechium edule HOM05D003612 ORTHO05D004323 2.8e-74 282.7 267 55.8
Actinidia22794 Actinidia chinensis HOM05D003612 ORTHO05D004323 4.8e-74 282.0 266 54.9
MBI16_g21161_MAGBIO Magnolia biondii HOM05D003612 ORTHO05D004323 6.3e-74 281.6 264 53.8
Psat3g074360 Pisum sativum HOM05D003612 ORTHO05D004323 4.1e-73 278.9 268 53.4
vmacro09060 Vaccinium macrocarpon HOM05D003612 ORTHO05D004323 3.5e-72 275.8 267 54.7
Lj1g0003709 Lotus japonicus HOM05D003612 ORTHO05D004323 7.7e-72 274.6 255 53.7
TPR.G18234 Trifolium pratense HOM05D003612 ORTHO05D004323 7.7e-72 274.6 259 52.5
TWI74G0690 Tripterygium wilfordii HOM05D003612 ORTHO05D004323 7.7e-72 274.6 273 53.8
FvH4_6g24380 Fragaria vesca HOM05D003612 ORTHO05D004323 1.7e-71 273.5 231 58.4
PGR004G2683 Punica granatum HOM05D003612 ORTHO05D004323 1.7e-71 273.5 267 52.1
TWI53G1732 Tripterygium wilfordii HOM05D003612 ORTHO05D004323 1.7e-71 273.5 266 54.9
Psat7g055720 Pisum sativum HOM05D003612 ORTHO05D004323 2.3e-71 273.1 257 54.1
TAR369G0285 Trochodendron aralioides HOM05D003612 ORTHO05D004323 5.0e-71 271.9 255 56.1
Cc04_g15140 Coffea canephora HOM05D003612 ORTHO05D004323 6.5e-71 271.6 267 54.3
Thecc.05G151100 Theobroma cacao HOM05D003612 ORTHO05D004323 1.1e-70 270.8 209 63.6
Cc06_g17860 Coffea canephora HOM05D003612 ORTHO05D004323 2.5e-70 269.6 267 55.4
Cpa.g.sc182.7 Carica papaya HOM05D003612 ORTHO05D004323 3.2e-70 269.2 268 54.5
Hund15698 Selenicereus undatus HOM05D003612 ORTHO05D004323 1.2e-69 267.3 265 53.2
VMungo1383G3573 Vigna mungo HOM05D003612 ORTHO05D004323 8.0e-69 264.6 252 54.0
DCAR_030722 Daucus carota HOM05D003612 ORTHO05D004323 1.2e-67 260.8 267 51.3
FAN14G3261 Fragaria x ananassa HOM05D003395 ORTHO05D004087 1.2e-67 260.8 233 58.4
Nitab4.5_0000082g0130 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.5e-67 260.4 267 53.9
Ca_08432_v3 Cicer arietinum L. HOM05D003612 ORTHO05D004323 5.7e-67 258.5 259 52.1
Peaxi162Scf00059g01812 Petunia axillaris HOM05D003612 ORTHO05D004323 1.7e-66 256.9 268 52.2
Oeu008170.1 Olea europaea HOM05D003612 ORTHO05D004323 3.7e-66 255.8 263 51.3
Migut.B00971 Erythranthe guttata HOM05D003612 ORTHO05D004323 1.1e-65 254.2 259 50.6
Sopen10g029960 Solanum pennellii HOM05D003612 ORTHO05D004323 1.1e-65 254.2 267 52.8
Nitab4.5_0000082g0220 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.4e-65 253.8 268 53.7
PGSC0003DMG400008168 Solanum tuberosum HOM05D003612 ORTHO05D004323 1.8e-65 253.4 267 52.4
Solyc10g079310.2 Solanum lycopersicum HOM05D003612 ORTHO05D004323 2.4e-65 253.1 267 52.8
Phvul.007G088100 Phaseolus vulgaris HOM05D003612 ORTHO05D004323 7.0e-65 251.5 212 58.0
FvH4_2g14101 Fragaria vesca HOM05D003786 ORTHO05D004375 1.2e-64 250.8 251 53.8
Prupe.5G048800 Prunus persica HOM05D003612 ORTHO05D004323 1.2e-64 250.8 213 58.7
Migut.K00098 Erythranthe guttata HOM05D003612 ORTHO05D004323 1.6e-64 250.4 266 49.2
Oeu023123.1 Olea europaea HOM05D003612 ORTHO05D004323 1.6e-64 250.4 257 52.5
FAN24G0412 Fragaria x ananassa HOM05D003786 ORTHO05D004375 2.7e-64 249.6 251 53.8
Nitab4.5_0010316g0020 Nicotiana tabacum HOM05D003612 ORTHO05D004323 2.7e-64 249.6 267 52.8
SalBow1G2865 Salvia bowleyana HOM05D003612 ORTHO05D004323 7.8e-64 248.1 257 51.0
CAN.G641.26 Capsicum annuum HOM05D003612 ORTHO05D004323 1.7e-63 246.9 267 51.7
ClCG10G015700 Citrullus lanatus HOM05D003612 ORTHO05D004323 2.9e-63 246.1 246 53.7
Lj6g0010730 Lotus japonicus HOM05D003612 ORTHO05D004323 1.1e-62 244.2 228 53.9
HanXRQChr04g0113101 Helianthus annuus HOM05D003612 ORTHO05D004323 1.9e-62 243.4 220 54.5
SGA_v2.0_scaffold94G28492 Striga asiatica HOM05D003612 ORTHO05D004323 2.5e-62 243.0 256 48.8
Lsat_1_v5_gn_7_11501 Lactuca sativa HOM05D000048 ORTHO05D000436 5.6e-62 241.9 238 52.5
Nn1g01643 Nelumbo nucifera HOM05D003612 ORTHO05D004323 1.6e-61 240.4 267 50.6
Nitab4.5_0000912g0130 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.6e-61 240.4 266 51.9
Actinidia17229 Actinidia chinensis HOM05D003612 ORTHO05D004323 5.2e-60 235.3 232 54.3
Dinv02795 Davidia involucrata HOM05D003612 ORTHO05D004323 5.2e-60 235.3 193 62.7
Lalb_Chr20g0110641 Lupinus albus HOM05D003612 ORTHO05D004323 8.9e-60 234.6 257 49.0
PSO210G2319 Papaver somniferum HOM05D003612 ORTHO05D004323 1.2e-59 234.2 269 47.6
MSTRG.26129 Avicennia marina HOM05D003612 ORTHO05D004323 9.8e-59 231.1 258 47.7
BraA04t16040Z Brassica rapa HOM05D003612 ORTHO05D004323 2.9e-58 229.6 267 47.9
Phvul.008G158112 Phaseolus vulgaris HOM05D003612 ORTHO05D004323 2.9e-58 229.6 221 53.8
CSS0050265 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 4.9e-58 228.8 200 58.0
SHI13547 Sapria himalayana HOM05D003612 ORTHO05D004323 4.9e-58 228.8 270 47.0
BcaC02g09930 Brassica carinata HOM05D003612 ORTHO05D004323 1.4e-57 227.3 267 48.3
C04p35070 Brassica napus HOM05D003612 ORTHO05D004323 1.4e-57 227.3 267 48.3
BolC4t25063H Brassica oleracea HOM05D003612 ORTHO05D004323 1.4e-57 227.3 267 48.3
Aqoxy7G03372 Aquilegia oxysepala HOM05D003612 ORTHO05D004323 1.8e-57 226.9 267 45.3
Duzib128G0868 Durio zibethinus HOM05D003612 ORTHO05D004323 1.8e-57 226.9 268 48.5
AL5G38900 Arabidopsis lyrata HOM05D003612 ORTHO05D004323 2.4e-57 226.5 268 47.0
Carub.0005s2421 Capsella rubella HOM05D003612 ORTHO05D004323 4.1e-57 225.7 268 46.6
Os09g0504800 Oryza sativa ssp. japonica HOM05D003612 ORTHO05D004323 4.1e-57 225.7 258 46.5
AT3G57360 Arabidopsis thaliana HOM05D003612 ORTHO05D004323 5.4e-57 225.3 267 46.4
THA.LOC104802043 Tarenaya hassleriana HOM05D003612 ORTHO05D004323 7.0e-57 224.9 270 46.3
Zm00001eb102310 Zea mays HOM05D003612 ORTHO05D004323 7.0e-57 224.9 253 46.2
CARHR167560 Cardamine hirsuta HOM05D003612 ORTHO05D004323 1.6e-56 223.8 268 45.9
PSO210G3983 Papaver somniferum HOM05D003612 ORTHO05D004323 2.0e-56 223.4 254 49.2
Aa31LG10G12210 Aethionema arabicum HOM05D000708 ORTHO05D004323 1.0e-55 221.1 256 46.1
AL3G11670 Arabidopsis lyrata HOM05D003612 ORTHO05D004323 3.0e-55 219.5 242 48.8
AUR62029731 Chenopodium quinoa HOM05D003612 ORTHO05D004323 3.0e-55 219.5 291 44.3
Nitab4.5_0004416g0060 Nicotiana tabacum HOM05D003612 ORTHO05D004323 3.9e-55 219.2 252 50.0
Aqoxy7G03834 Aquilegia oxysepala HOM05D003612 ORTHO05D004323 5.0e-55 218.8 268 45.1
PSO648G0079 Papaver somniferum HOM05D003612 ORTHO05D004323 6.6e-55 218.4 265 48.3
EL10Ac6g13255 Beta vulgaris HOM05D003612 ORTHO05D004323 1.1e-54 217.6 279 44.4
Nn8g39441 Nelumbo nucifera HOM05D003612 ORTHO05D004323 1.5e-54 217.2 251 49.4
Carub.0001s3481 Capsella rubella HOM05D003612 ORTHO05D004323 3.3e-54 216.1 268 45.1
ECA236G0894 Erigeron canadensis HOM05D003612 ORTHO05D004323 3.3e-54 216.1 258 49.6
Aa31LG1G13790 Aethionema arabicum HOM05D003612 ORTHO05D004323 5.6e-54 215.3 261 45.6
A04p03190 Brassica napus HOM05D003612 ORTHO05D004323 5.6e-54 215.3 290 43.8
Sp5g05240 Schrenkiella parvula HOM05D003612 ORTHO05D004323 7.3e-54 214.9 269 45.4
Thhalv10006455m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 8.0e-53 211.5 263 44.5
Ah.03g134750 Amaranthus hybridus HOM05D003612 ORTHO05D004323 1.4e-52 210.7 278 42.8
A09p50260 Brassica napus HOM05D003612 ORTHO05D004323 1.8e-52 210.3 269 45.7
BraA09t40476Z Brassica rapa HOM05D003612 ORTHO05D004323 1.8e-52 210.3 269 45.7
C08p32750 Brassica napus HOM05D003612 ORTHO05D004323 4.0e-52 209.1 269 46.5
BolC8t50886H Brassica oleracea HOM05D003612 ORTHO05D004323 4.0e-52 209.1 269 46.5
Gohir.D01G184300 Gossypium hirsutum HOM05D003612 ORTHO05D004323 6.8e-52 208.4 178 56.2
PSO339G0745 Papaver somniferum HOM05D003612 ORTHO05D004323 6.8e-52 208.4 242 47.1
ATR0829G008 Amborella trichopoda HOM05D003612 ORTHO05D004323 1.2e-51 207.6 314 40.4
AUR62032829 Chenopodium quinoa HOM05D003612 ORTHO05D004323 1.2e-51 207.6 262 45.4
Glyma.07G129400 Glycine max HOM05D003612 ORTHO05D004323 3.4e-51 206.1 278 42.4
HPP92_020032 Vanilla planifolia HOM05D003612 ORTHO05D004323 7.5e-51 204.9 212 48.1
Sc04g0007910 Simmondsia chinensis HOM05D003612 ORTHO05D004323 1.7e-50 203.8 179 57.5
Sopen03g026320 Solanum pennellii HOM05D003612 ORTHO05D004323 8.3e-50 201.4 203 53.7
unitig_52.g17667 Utricularia gibba HOM05D003612 ORTHO05D004323 5.4e-49 198.7 243 43.2
TAR369G0664 Trochodendron aralioides HOM05D003612 ORTHO05D004323 2.0e-48 196.8 173 57.2
Thhalv10009639m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 3.5e-48 196.1 269 43.1
AT3G02370 Arabidopsis thaliana HOM05D003612 ORTHO05D004323 3.9e-47 192.6 212 47.6
BcaB02g08320 Brassica carinata HOM05D003612 ORTHO05D004323 1.1e-46 191.0 242 43.0
BolC8t50888H Brassica oleracea HOM05D003612 ORTHO05D004323 1.1e-46 191.0 263 43.3
BcaC07g40390 Brassica carinata HOM05D003612 ORTHO05D004323 4.3e-46 189.1 212 48.1
Thhalv10009908m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 2.1e-45 186.8 267 41.2
MD14G1076600 Malus domestica HOM05D003612 ORTHO05D004323 1.4e-44 184.1 237 44.3
AUR62005836 Chenopodium quinoa HOM05D000760 ORTHO05D004323 3.1e-44 183.0 252 44.8
Thhalv10008553m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 5.2e-44 182.2 212 44.8
PGSC0003DMG400011936 Solanum tuberosum HOM05D003612 ORTHO05D004323 1.5e-43 180.6 267 42.7
Eucgr.A02319 Eucalyptus grandis HOM05D003612 ORTHO05D004323 3.4e-43 179.5 263 41.8
Lj1C1128T4 Lonicera japonica HOM05D003612 ORTHO05D004323 3.4e-43 179.5 160 56.2
Sopen03g026330 Solanum pennellii HOM05D003612 ORTHO05D004323 2.4e-41 173.3 225 44.9
CDE09G0671 Ceratophyllum demersum HOM05D003612 ORTHO05D004323 3.2e-41 172.9 238 43.3
QL07p002858 Quercus lobata HOM05D003612 ORTHO05D004323 9.2e-41 171.4 128 74.2
PSO339G0740 Papaver somniferum HOM05D003612 ORTHO05D004323 2.7e-40 169.9 191 46.6
Peaxi162Scf00244g00019 Petunia axillaris HOM05D003612 ORTHO05D004323 4.6e-40 169.1 255 41.2
SGA_v2.0_scaffold1G00588 Striga asiatica HOM05D003612 ORTHO05D004323 6.2e-37 158.7 205 42.9
CSS0020602 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 5.8e-35 152.1 176 48.9
GSVIVG01033245001 Vitis vinifera HOM05D003612 ORTHO05D004323 2.2e-34 150.2 158 54.4
PSO339G6630 Papaver somniferum HOM05D003612 ORTHO05D004323 1.9e-33 147.1 218 42.7
Ah.02g117470 Amaranthus hybridus HOM05D003612 ORTHO05D004323 7.8e-32 141.7 233 38.2
SMO364G0364 Selaginella moellendorffii HOM05D003612 ORTHO05D004323 7.8e-32 141.7 223 35.9
MELO3C030712.2 Cucumis melo HOM05D003612 ORTHO05D004323 1.3e-31 141.0 132 56.8
RcHm_v2.0_Chr1g0361791 Rosa chinensis HOM05D003612 ORTHO05D004323 1.1e-30 137.9 137 54.7
Mapoly0007s0121 Marchantia polymorpha HOM05D003612 ORTHO05D004323 1.5e-30 137.5 317 28.7
BcaNung07094 Brassica carinata HOM05D003612 ORTHO05D004323 1.9e-30 137.1 168 43.5
AagrBONN_evm.TU.Sc2ySwM_368.1563 Anthoceros agrestis HOM05D003612 ORTHO05D004323 2.4e-28 130.2 301 29.9
BcaNung07092 Brassica carinata HOM05D003612 ORTHO05D004323 5.8e-27 125.6 263 35.4
Glyma.19G136600 Glycine max HOM05D003612 ORTHO05D004323 2.9e-26 123.2 255 34.1
C08p32770 Brassica napus HOM05D003612 ORTHO05D004323 3.8e-26 122.9 263 34.6
SEGI_02185 Sequoiadendron giganteum HOM05D003612 ORTHO05D004323 4.2e-25 119.4 239 32.2
Eucgr.A02317 Eucalyptus grandis HOM05D003612 ORTHO05D004323 5.4e-25 119.0 80 66.2
Pp3c3_37380 Physcomitrium patens HOM05D003612 ORTHO05D004323 3.5e-24 116.3 218 33.5
PSO339G4790 Papaver somniferum HOM05D003612 ORTHO05D004323 4.6e-24 115.9 155 43.2
Nn2g10440 Nelumbo nucifera HOM05D003612 ORTHO05D004323 5.1e-23 112.5 117 55.6
Cfa015703 Carpinus fangiana HOM05D003612 ORTHO05D004323 7.3e-22 108.6 71 76.1
Solyc03g096220.3 Solanum lycopersicum HOM05D003612 ORTHO05D004323 1.1e-20 104.8 82 59.8
RcHm_v2.0_Chr6g0276201 Rosa chinensis HOM05D003786 ORTHO05D004375 3.8e-18 96.3 97 54.6
Duzib093G1009 Durio zibethinus HOM05D003612 ORTHO05D004323 1.2e-16 91.3 74 62.2
Nitab4.5_0001598g0060 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.6e-16 90.9 196 38.8
Glyma.03G134401 Glycine max HOM05D003612 ORTHO05D004323 2.7e-16 90.1 91 48.4
CBR_g2822 Chara braunii HOM05D000019 ORTHO05D000048 6.7e-15 85.5 132 36.4
PGSC0003DMG400013536 Solanum tuberosum HOM05D003612 ORTHO05D004323 2.1e-13 80.5 88 51.1
Peaxi162Scf00002g03215 Petunia axillaris HOM05D003612 ORTHO05D004323 2.0e-11 73.9 138 37.0
CsaV3_3G040730 Cucumis sativus L. HOM05D003612 ORTHO05D004323 1.3e-10 71.2 68 57.4
QL07p002898 Quercus lobata HOM05D003612 ORTHO05D004323 1.7e-10 70.9 31 100.0
Lj1A1128T58 Lonicera japonica HOM05D003612 ORTHO05D004323 5.5e-09 65.9 45 64.4
SEGI_36865 Sequoiadendron giganteum HOM05D003612 ORTHO05D004323 7.1e-09 65.5 85 44.7
CAN.G125.23 Capsicum annuum HOM05D000107 ORTHO05D000062 4.6e-08 62.8 130 33.8
Lj1A1127T48 Lonicera japonica HOM05D003612 ORTHO05D004323 7.9e-08 62.0 43 62.8
Actinidia09310 Actinidia chinensis HOM05D003612 ORTHO05D004323 8.7e-07 58.5 44 59.1
GSVIVG01033244001 Vitis vinifera HOM05D003612 ORTHO05D004323 1.1e-06 58.2 65 49.2


User provided reference genes

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