Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p019871 Quercus lobata HOM05D002973 ORTHO05D003383 2.7e-51 204.9 95 100.0
QL03p055293 Quercus lobata HOM05D002973 ORTHO05D003383 8.8e-18 93.6 101 54.5
Haze_12337 Corylus avellana HOM05D002973 ORTHO05D003383 3.4e-17 91.7 107 51.4
arahy.Tifrunner.gnm1.ann1.KSGU3T Arachis hypogaea HOM05D002973 ORTHO05D003383 4.4e-17 91.3 107 54.2
arahy.Tifrunner.gnm1.ann1.UJ6U13 Arachis hypogaea HOM05D002973 ORTHO05D003383 4.4e-17 91.3 107 54.2
Cfa009306 Carpinus fangiana HOM05D002973 ORTHO05D003383 9.8e-17 90.1 107 50.5
PGR102G2150 Punica granatum HOM05D002973 ORTHO05D003383 9.8e-17 90.1 107 51.4
CiPaw.06G063000 Carya illinoinensis HOM05D002973 ORTHO05D003383 3.7e-16 88.2 107 49.5
Glyma.18G010000 Glycine max HOM05D002973 ORTHO05D003383 3.7e-16 88.2 107 50.5
Lalb_Chr08g0230741 Lupinus albus HOM05D002973 ORTHO05D003383 4.8e-16 87.8 108 50.0
Eucgr.J02286 Eucalyptus grandis HOM05D002973 ORTHO05D003383 1.1e-15 86.7 109 47.7
Phvul.001G258700 Phaseolus vulgaris HOM05D002973 ORTHO05D003383 1.4e-15 86.3 107 49.5
Lj6g0020522 Lotus japonicus HOM05D002973 ORTHO05D003383 1.8e-15 85.9 112 48.2
Potri.008G179700 Populus trichocarpa HOM05D002973 ORTHO05D003383 2.4e-15 85.5 107 49.5
Manes.13G014800 Manihot esculenta HOM05D002973 ORTHO05D003383 3.1e-15 85.1 101 50.5
Prupe.1G235200 Prunus persica HOM05D002973 ORTHO05D003383 5.4e-15 84.3 106 49.1
VMungo1383G0404 Vigna mungo HOM05D002973 ORTHO05D003383 5.4e-15 84.3 107 48.6
Sabra10G0050000 Salix brachista HOM05D002973 ORTHO05D003383 7.0e-15 84.0 107 49.5
ClCG08G017350 Citrullus lanatus HOM05D002973 ORTHO05D003383 9.1e-15 83.6 101 47.5
MD17G1017400 Malus domestica HOM05D002973 ORTHO05D003383 9.1e-15 83.6 112 44.6
Manes.12G016000 Manihot esculenta HOM05D002973 ORTHO05D003383 9.1e-15 83.6 107 49.5
Sabra08G0137300 Salix brachista HOM05D002973 ORTHO05D003383 9.1e-15 83.6 107 48.6
Sed0004209 Sechium edule HOM05D002973 ORTHO05D003383 9.1e-15 83.6 101 47.5
Eucgr.B03456 Eucalyptus grandis HOM05D002973 ORTHO05D003383 1.2e-14 83.2 106 50.0
TAR622G0734 Trochodendron aralioides HOM05D002973 ORTHO05D003383 1.6e-14 82.8 107 49.5
Gohir.A01G156400 Gossypium hirsutum HOM05D002973 ORTHO05D003383 2.0e-14 82.4 101 49.5
Hma1.2p1_1484F.1_g286320 Hydrangea macrophylla HOM05D002973 ORTHO05D003383 2.0e-14 82.4 108 49.1
Prupe.3G300500 Prunus persica HOM05D002973 ORTHO05D003383 2.0e-14 82.4 108 47.2
Thhalv10007959m.g Eutrema salsugineum HOM05D002973 ORTHO05D003383 2.7e-14 82.0 88 48.9
Nn3g16556 Nelumbo nucifera HOM05D002973 ORTHO05D003383 2.7e-14 82.0 105 46.7
Lj6A820T77 Lonicera japonica HOM05D002973 ORTHO05D003383 3.5e-14 81.6 107 43.9
MD13G1109800 Malus domestica HOM05D002973 ORTHO05D003383 3.5e-14 81.6 107 46.7
Atru.chr11.2229 Acer truncatum HOM05D002973 ORTHO05D003383 4.5e-14 81.3 110 47.3
BraA02t08437Z Brassica rapa HOM05D002973 ORTHO05D003383 4.5e-14 81.3 106 42.5
Hma1.2p1_0079F.1_g041680 Hydrangea macrophylla HOM05D002973 ORTHO05D003383 4.5e-14 81.3 107 44.9
Sp2g15210 Schrenkiella parvula HOM05D002973 ORTHO05D003383 4.5e-14 81.3 106 42.5
MELO3C010724.2 Cucumis melo HOM05D002973 ORTHO05D003383 5.9e-14 80.9 101 46.5
CsaV3_2G025280 Cucumis sativus L. HOM05D002973 ORTHO05D003383 5.9e-14 80.9 101 46.5
Duzib251G0262 Durio zibethinus HOM05D002973 ORTHO05D003383 5.9e-14 80.9 107 47.7
Duzib268G1148 Durio zibethinus HOM05D002973 ORTHO05D003383 5.9e-14 80.9 107 47.7
Lalb_Chr13g0294121 Lupinus albus HOM05D002973 ORTHO05D003383 5.9e-14 80.9 106 47.2
RcHm_v2.0_Chr2g0174361 Rosa chinensis HOM05D002973 ORTHO05D003383 5.9e-14 80.9 109 46.8
Dinv14789 Davidia involucrata HOM05D002973 ORTHO05D003383 7.7e-14 80.5 107 44.9
Lj7A606G74 Lonicera japonica HOM05D002973 ORTHO05D003383 7.7e-14 80.5 108 48.1
BcaC05g25245 Brassica carinata HOM05D002973 ORTHO05D003383 1.0e-13 80.1 104 44.2
A02p34230 Brassica napus HOM05D002973 ORTHO05D003383 1.0e-13 80.1 106 41.5
BraA06t24149Z Brassica rapa HOM05D002973 ORTHO05D003383 1.0e-13 80.1 105 43.8
CANSAT64G0445 Cannabis sativa HOM05D002973 ORTHO05D003383 1.0e-13 80.1 117 41.9
Carub.0005s0384 Capsella rubella HOM05D002973 ORTHO05D003383 1.0e-13 80.1 100 47.0
Ca_16491_v3 Cicer arietinum L. HOM05D002973 ORTHO05D003383 1.0e-13 80.1 107 48.6
Medtr3g085960 Medicago truncatula HOM05D002973 ORTHO05D003383 1.0e-13 80.1 107 48.6
Psat5g093120 Pisum sativum HOM05D002973 ORTHO05D003383 1.0e-13 80.1 107 48.6
Rhsim08G0046000 Rhododendron simsii HOM05D002973 ORTHO05D003383 1.0e-13 80.1 108 47.2
TPR.G22433 Trifolium pratense HOM05D002973 ORTHO05D003383 1.0e-13 80.1 107 48.6
BcaB07g30244 Brassica carinata HOM05D002973 ORTHO05D003383 1.3e-13 79.7 101 44.6
BcaC09g50376 Brassica carinata HOM05D002973 ORTHO05D003383 1.3e-13 79.7 105 43.8
C05p11300 Brassica napus HOM05D002973 ORTHO05D003383 1.3e-13 79.7 105 43.8
BolC5t29879H Brassica oleracea HOM05D002973 ORTHO05D003383 1.3e-13 79.7 105 43.8
Duzib248G0932 Durio zibethinus HOM05D002973 ORTHO05D003383 1.3e-13 79.7 107 46.7
FAN02G4470 Fragaria x ananassa HOM05D002973 ORTHO05D003383 1.3e-13 79.7 109 45.9
Potri.010G055000 Populus trichocarpa HOM05D002973 ORTHO05D003383 1.3e-13 79.7 107 48.6
Ciclev10031750m.g Citrus clementina HOM05D002973 ORTHO05D003383 1.7e-13 79.3 108 45.4
Dinv18161 Davidia involucrata HOM05D002973 ORTHO05D003383 1.7e-13 79.3 107 43.9
Dinv18165 Davidia involucrata HOM05D002973 ORTHO05D003383 1.7e-13 79.3 107 43.9
Gorai.002G190600 Gossypium raimondii HOM05D002973 ORTHO05D003383 1.7e-13 79.3 101 47.5
TWI36G0464 Tripterygium wilfordii HOM05D002973 ORTHO05D003383 1.7e-13 79.3 107 49.5
GSVIVG01001843001 Vitis vinifera HOM05D002973 ORTHO05D003383 2.3e-13 79.0 108 45.4
MSTRG.7970 Avicennia marina HOM05D002973 ORTHO05D003383 2.9e-13 78.6 107 42.1
CSS0002062 Camellia sinensis var. sinensis HOM05D000557 ORTHO05D003383 2.9e-13 78.6 138 39.1
Cpa.g.sc130.35 Carica papaya HOM05D002973 ORTHO05D003383 2.9e-13 78.6 107 43.9
MD16G1109700 Malus domestica HOM05D002973 ORTHO05D003383 2.9e-13 78.6 107 45.8
RcHm_v2.0_Chr4g0431621 Rosa chinensis HOM05D002973 ORTHO05D003383 2.9e-13 78.6 110 43.6
GSVIVG01010324001 Vitis vinifera HOM05D002973 ORTHO05D003383 2.9e-13 78.6 101 47.5
AL1G25210 Arabidopsis lyrata HOM05D002973 ORTHO05D003383 3.8e-13 78.2 103 46.6
C02p52580 Brassica napus HOM05D002973 ORTHO05D003383 3.8e-13 78.2 106 40.6
Cpa.g.sc1453.1 Carica papaya HOM05D002973 ORTHO05D003383 3.8e-13 78.2 107 46.7
FvH4_6g52740 Fragaria vesca HOM05D002973 ORTHO05D003383 3.8e-13 78.2 109 45.0
FAN09G3245 Fragaria x ananassa HOM05D002973 ORTHO05D003383 3.8e-13 78.2 109 45.0
Nn4g22430 Nelumbo nucifera HOM05D002973 ORTHO05D003383 3.8e-13 78.2 107 45.8
Peaxi162Scf00797g00110 Petunia axillaris HOM05D002973 ORTHO05D003383 3.8e-13 78.2 101 42.6
SGA_v2.0_scaffold391G50640 Striga asiatica HOM05D002973 ORTHO05D003383 3.8e-13 78.2 106 46.2
BcaC03g17309 Brassica carinata HOM05D002973 ORTHO05D003383 5.0e-13 77.8 106 41.5
A06p09590 Brassica napus HOM05D002973 ORTHO05D003383 5.0e-13 77.8 105 42.9
CSS0005812 Camellia sinensis var. sinensis HOM05D002973 ORTHO05D003383 5.0e-13 77.8 107 44.9
CARHR013800 Cardamine hirsuta HOM05D002973 ORTHO05D003383 5.0e-13 77.8 105 41.9
Lalb_Chr07g0187271 Lupinus albus HOM05D002973 ORTHO05D003383 5.0e-13 77.8 107 44.9
MBI06_g28881_MAGBIO Magnolia biondii HOM05D002973 ORTHO05D003383 5.0e-13 77.8 107 46.7
MBI11_g02884_MAGBIO Magnolia biondii HOM05D002973 ORTHO05D003383 5.0e-13 77.8 101 46.5
Oeu056691.1 Olea europaea HOM05D002973 ORTHO05D003383 5.0e-13 77.8 107 41.1
Oeu056693.1 Olea europaea HOM05D002973 ORTHO05D003383 5.0e-13 77.8 107 41.1
CDE02G4381 Ceratophyllum demersum HOM05D002973 ORTHO05D003383 6.5e-13 77.4 108 42.6
Lsat_1_v5_gn_4_185701 Lactuca sativa HOM05D002973 ORTHO05D003383 6.5e-13 77.4 107 44.9
PSO782G4746 Papaver somniferum HOM05D002973 ORTHO05D003383 8.6e-13 77.0 107 45.8
Solyc12g077540.3 Solanum lycopersicum HOM05D002973 ORTHO05D003383 8.6e-13 77.0 105 43.8
Sopen12g028110 Solanum pennellii HOM05D002973 ORTHO05D003383 8.6e-13 77.0 107 45.8
SGA_v2.0_scaffold87G27122 Striga asiatica HOM05D002973 ORTHO05D003383 8.6e-13 77.0 106 44.3
CSS0038373 Camellia sinensis var. sinensis HOM05D002973 ORTHO05D003383 1.1e-12 76.6 108 48.1
Gohir.D05G312500 Gossypium hirsutum HOM05D002973 ORTHO05D003383 1.1e-12 76.6 107 45.8
Gorai.009G333800 Gossypium raimondii HOM05D002973 ORTHO05D003383 1.1e-12 76.6 107 45.8
PSO063G2262 Papaver somniferum HOM05D002973 ORTHO05D003383 1.1e-12 76.6 101 46.5
THA.LOC104805259 Tarenaya hassleriana HOM05D002973 ORTHO05D003383 1.1e-12 76.6 108 44.4
BcaB02g06447 Brassica carinata HOM05D002973 ORTHO05D003383 1.5e-12 76.3 103 42.7
BcaB08g34296 Brassica carinata HOM05D002973 ORTHO05D003383 1.5e-12 76.3 103 42.7
Sp1g11920 Schrenkiella parvula HOM05D002973 ORTHO05D003383 1.5e-12 76.3 103 42.7
CSS0011594 Camellia sinensis var. sinensis HOM05D002973 ORTHO05D003383 1.9e-12 75.9 125 41.6
CDE09G1054 Ceratophyllum demersum HOM05D002973 ORTHO05D003383 1.9e-12 75.9 108 44.4
Thhalv10004359m.g Eutrema salsugineum HOM05D002973 ORTHO05D003383 1.9e-12 75.9 101 44.6
BolC2t11333H Brassica oleracea HOM05D002973 ORTHO05D003383 2.5e-12 75.5 106 39.6
Dinv33381 Davidia involucrata HOM05D002973 ORTHO05D003383 3.2e-12 75.1 105 45.7
Gohir.A05G311400 Gossypium hirsutum HOM05D002973 ORTHO05D003383 3.2e-12 75.1 107 44.9
Thecc.02G273000 Theobroma cacao HOM05D002973 ORTHO05D003383 3.2e-12 75.1 107 44.9
BcaC07g41640 Brassica carinata HOM05D002973 ORTHO05D003383 4.2e-12 74.7 103 41.7
Migut.E00236 Erythranthe guttata HOM05D002973 ORTHO05D003383 4.2e-12 74.7 107 41.1
PSO017G6775 Papaver somniferum HOM05D002973 ORTHO05D003383 4.2e-12 74.7 107 43.9
PSO478G4301 Papaver somniferum HOM05D002973 ORTHO05D003383 4.2e-12 74.7 107 43.9
TAR371G1231 Trochodendron aralioides HOM05D000557 ORTHO05D003383 4.2e-12 74.7 102 45.1
ATR0712G015 Amborella trichopoda HOM05D002973 ORTHO05D003383 5.5e-12 74.3 115 40.9
CAN.G34.18 Capsicum annuum HOM05D002973 ORTHO05D003383 5.5e-12 74.3 107 44.9
FvH4_4g24610 Fragaria vesca HOM05D002973 ORTHO05D003383 5.5e-12 74.3 116 41.4
FAN12G0612 Fragaria x ananassa HOM05D002973 ORTHO05D003383 5.5e-12 74.3 116 41.4
FAN22G1164 Fragaria x ananassa HOM05D002973 ORTHO05D003383 5.5e-12 74.3 116 41.4
TAR374G0550 Trochodendron aralioides HOM05D002973 ORTHO05D003383 5.5e-12 74.3 108 42.6
ATR0686G092 Amborella trichopoda HOM05D002973 ORTHO05D003383 7.2e-12 73.9 111 41.4
AT3G25990 Arabidopsis thaliana HOM05D002973 ORTHO05D003383 9.5e-12 73.6 99 43.4
FAN17G2795 Fragaria x ananassa HOM05D002973 ORTHO05D003383 1.2e-11 73.2 110 41.8
vmacro18317 Vaccinium macrocarpon HOM05D002973 ORTHO05D003383 1.2e-11 73.2 142 38.0
Actinidia08093 Actinidia chinensis HOM05D002973 ORTHO05D003383 1.6e-11 72.8 107 41.1
A09p62970 Brassica napus HOM05D002973 ORTHO05D003383 1.6e-11 72.8 113 38.1
CSS0036606 Camellia sinensis var. sinensis HOM05D002973 ORTHO05D003383 1.6e-11 72.8 138 38.4
FAN07G2476 Fragaria x ananassa HOM05D002973 ORTHO05D003383 1.6e-11 72.8 116 40.5
Gohir.D12G151700 Gossypium hirsutum HOM05D002973 ORTHO05D003383 1.6e-11 72.8 101 44.6
Gorai.008G163200 Gossypium raimondii HOM05D002973 ORTHO05D003383 1.6e-11 72.8 101 44.6
BraA09t41655Z Brassica rapa HOM05D002973 ORTHO05D003383 2.1e-11 72.4 113 38.1
Cc11_g16470 Coffea canephora HOM05D002973 ORTHO05D003383 2.1e-11 72.4 105 41.0
Aa31LG1G1580 Aethionema arabicum HOM05D002973 ORTHO05D003383 2.8e-11 72.0 120 39.2
COL.COLO4_23606 Corchorus olitorius HOM05D002973 ORTHO05D003383 2.8e-11 72.0 101 44.6
SEGI_30628 Sequoiadendron giganteum HOM05D002973 ORTHO05D003383 2.8e-11 72.0 100 43.0
ECA232G2650 Erigeron canadensis HOM05D002973 ORTHO05D003383 3.6e-11 71.6 107 44.9
Oeu049162.2 Olea europaea HOM05D002973 ORTHO05D003383 3.6e-11 71.6 107 43.0
BolC8t52192H Brassica oleracea HOM05D002973 ORTHO05D003383 6.1e-11 70.9 113 38.1
AT1G13450 Arabidopsis thaliana HOM05D002973 ORTHO05D003383 8.0e-11 70.5 104 45.2
DCAR_007020 Daucus carota HOM05D002973 ORTHO05D003383 8.0e-11 70.5 101 40.6
AL5G14650 Arabidopsis lyrata HOM05D002973 ORTHO05D003383 1.0e-10 70.1 95 45.3
EL10Ac6g13424 Beta vulgaris HOM05D002973 ORTHO05D003383 1.8e-10 69.3 107 43.0
C08p46420 Brassica napus HOM05D002973 ORTHO05D003383 1.8e-10 69.3 113 37.2
AUR62005563 Chenopodium quinoa HOM05D002973 ORTHO05D003383 2.3e-10 68.9 112 40.2
unitig_8.g3142 Utricularia gibba HOM05D002973 ORTHO05D003383 2.3e-10 68.9 101 38.6
Ah.02g130540 Amaranthus hybridus HOM05D002973 ORTHO05D003383 4.0e-10 68.2 108 42.6
Peaxi162Scf00128g00824 Petunia axillaris HOM05D002973 ORTHO05D003383 4.0e-10 68.2 107 37.4
Aqoxy5G03548 Aquilegia oxysepala HOM05D002973 ORTHO05D003383 5.2e-10 67.8 107 41.1
Os04g0486400 Oryza sativa ssp. japonica HOM05D002973 ORTHO05D003383 5.2e-10 67.8 115 40.0
Dinv04845 Davidia involucrata HOM05D002973 ORTHO05D003383 6.8e-10 67.4 108 41.7
ECA246G3587 Erigeron canadensis HOM05D002973 ORTHO05D003383 6.8e-10 67.4 101 40.6
HanXRQChr06g0174821 Helianthus annuus HOM05D002973 ORTHO05D003383 6.8e-10 67.4 101 35.6
MD06G1052100 Malus domestica HOM05D002973 ORTHO05D003383 8.8e-10 67.0 93 46.2
Nitab4.5_0000581g0190 Nicotiana tabacum HOM05D002973 ORTHO05D003383 8.8e-10 67.0 107 42.1
Lsat_1_v5_gn_3_29420 Lactuca sativa HOM05D002973 ORTHO05D003383 1.2e-09 66.6 112 38.4
Nitab4.5_0001898g0070 Nicotiana tabacum HOM05D002973 ORTHO05D003383 1.2e-09 66.6 107 42.1
Hund06061 Selenicereus undatus HOM05D002973 ORTHO05D003383 1.2e-09 66.6 105 42.9
unitig_22.g6417 Utricularia gibba HOM05D002973 ORTHO05D003383 1.2e-09 66.6 101 39.6
Aqoxy3G01440 Aquilegia oxysepala HOM05D002973 ORTHO05D003383 2.6e-09 65.5 107 40.2
HanXRQChr17g0540041 Helianthus annuus HOM05D002973 ORTHO05D003383 3.4e-09 65.1 101 38.6
Ah.03g133800 Amaranthus hybridus HOM05D002973 ORTHO05D003383 9.8e-09 63.5 112 37.5
Zm00001eb425230 Zea mays HOM05D002973 ORTHO05D003383 9.8e-09 63.5 113 37.2
CSS0006179 Camellia sinensis var. sinensis HOM05D002973 ORTHO05D003383 1.3e-08 63.2 101 39.6
Glyma.11G247300 Glycine max HOM05D002973 ORTHO05D003383 1.3e-08 63.2 50 66.0
Hund25434 Selenicereus undatus HOM05D002973 ORTHO05D003383 1.3e-08 63.2 106 40.6
Migut.K00687 Erythranthe guttata HOM05D002973 ORTHO05D003383 1.7e-08 62.8 99 40.4
HanXRQChr15g0487061 Helianthus annuus HOM05D002973 ORTHO05D003383 3.7e-08 61.6 107 41.1
TWI75G0368 Tripterygium wilfordii HOM05D002973 ORTHO05D003383 3.7e-08 61.6 48 68.8
TAR629G2091 Trochodendron aralioides HOM05D002973 ORTHO05D003383 3.7e-08 61.6 106 40.6
Carub.0001s1315 Capsella rubella HOM05D002973 ORTHO05D003383 1.1e-07 60.1 44 65.9
SEGI_15672 Sequoiadendron giganteum HOM05D002973 ORTHO05D003383 1.1e-07 60.1 107 41.1
Actinidia25604 Actinidia chinensis HOM05D002973 ORTHO05D003383 1.4e-07 59.7 107 33.6
Aqoxy5G03547 Aquilegia oxysepala HOM05D002973 ORTHO05D003383 2.4e-07 58.9 107 39.3
HPP92_006268 Vanilla planifolia HOM05D002973 ORTHO05D003383 3.1e-07 58.5 109 33.9
TPR.G22437 Trifolium pratense HOM05D002973 ORTHO05D003383 5.4e-07 57.8 87 46.0
CSS0037791 Camellia sinensis var. sinensis HOM05D002973 ORTHO05D003383 7.0e-07 57.4 50 66.0
Actinidia16188 Actinidia chinensis HOM05D002973 ORTHO05D003383 1.6e-06 56.2 101 33.7
AUR62024171 Chenopodium quinoa HOM05D002973 ORTHO05D003383 1.6e-06 56.2 50 60.0
GSVIVG01007522001 Vitis vinifera HOM05D002973 ORTHO05D003383 2.0e-06 55.8 114 34.2
SMO165G0051 Selaginella moellendorffii HOM05D002973 ORTHO05D003383 2.7e-06 55.5 48 58.3
Hund02415 Selenicereus undatus HOM05D002973 ORTHO05D003383 3.5e-06 55.1 91 40.7
Hma1.2p1_0227F.1_g095880 Hydrangea macrophylla HOM05D002973 ORTHO05D003383 4.5e-06 54.7 50 62.0
Sc11g0000710 Simmondsia chinensis HOM05D002973 ORTHO05D003383 4.5e-06 54.7 111 35.1


User provided reference genes

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