Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p001224 Quercus lobata HOM05D006185 ORTHO05D007572 1.2e-106 389.8 188 100.0
Haze_26036 Corylus avellana HOM05D006185 ORTHO05D007572 1.6e-87 326.2 188 79.3
CiPaw.03G203800 Carya illinoinensis HOM05D006185 ORTHO05D007572 2.1e-87 325.9 188 78.2
CANSAT56G3530 Cannabis sativa HOM05D006185 ORTHO05D007572 1.4e-86 323.2 190 79.5
CANSAT56G1413 Cannabis sativa HOM05D006185 ORTHO05D007572 1.8e-86 322.8 189 78.3
CANSAT56G1917 Cannabis sativa HOM05D006185 ORTHO05D007572 3.0e-86 322.0 190 78.9
Cfa002967 Carpinus fangiana HOM05D006185 ORTHO05D007572 5.2e-86 321.2 188 78.7
Atru.chr7.1733 Acer truncatum HOM05D006185 ORTHO05D007572 8.8e-86 320.5 189 79.4
CANSAT56G0026 Cannabis sativa HOM05D006185 ORTHO05D007572 1.1e-85 320.1 189 78.3
COL.COLO4_18072 Corchorus olitorius HOM05D006185 ORTHO05D007572 1.7e-84 316.2 188 78.2
Duzib150G0101 Durio zibethinus HOM05D006185 ORTHO05D007572 1.7e-84 316.2 188 77.7
Thecc.09G074200 Theobroma cacao HOM05D006185 ORTHO05D007572 1.8e-83 312.8 188 78.2
Dinv25540 Davidia involucrata HOM05D006185 ORTHO05D007572 2.4e-83 312.4 189 76.2
Duzib187G0940 Durio zibethinus HOM05D006185 ORTHO05D007572 2.4e-83 312.4 188 77.7
Gohir.D05G035900 Gossypium hirsutum HOM05D006185 ORTHO05D007572 3.1e-83 312.0 188 76.6
Gorai.009G036500 Gossypium raimondii HOM05D006185 ORTHO05D007572 3.1e-83 312.0 188 76.6
Gohir.A05G034500 Gossypium hirsutum HOM05D006185 ORTHO05D007572 1.2e-82 310.1 188 76.1
EL10Ac8g19027 Beta vulgaris HOM05D006185 ORTHO05D007572 1.6e-82 309.7 185 77.3
Cpa.g.sc28.15 Carica papaya HOM05D006185 ORTHO05D007572 3.5e-82 308.5 189 76.2
ClCG03G014940 Citrullus lanatus HOM05D006185 ORTHO05D007572 5.9e-82 307.8 186 76.9
Hund26074 Selenicereus undatus HOM05D006185 ORTHO05D007572 1.0e-81 307.0 185 75.1
CsaV3_1G041210 Cucumis sativus L. HOM05D006185 ORTHO05D007572 1.7e-81 306.2 186 75.8
Prupe.7G195700 Prunus persica HOM05D006185 ORTHO05D007572 2.2e-81 305.8 189 77.2
Ciclev10009607m.g Citrus clementina HOM05D006185 ORTHO05D007572 6.5e-81 304.3 188 75.5
MD02G1095400 Malus domestica HOM05D006185 ORTHO05D007572 8.5e-81 303.9 188 78.2
Sc06g0006920 Simmondsia chinensis HOM05D006185 ORTHO05D007572 2.5e-80 302.4 185 75.1
TWI63G0883 Tripterygium wilfordii HOM05D006185 ORTHO05D007572 2.5e-80 302.4 184 74.5
Peaxi162Scf00928g00132 Petunia axillaris HOM05D006185 ORTHO05D007572 7.2e-80 300.8 187 74.3
Ah.09g229250 Amaranthus hybridus HOM05D006185 ORTHO05D007572 1.6e-79 299.7 185 75.1
Manes.03G041800 Manihot esculenta HOM05D006185 ORTHO05D007572 1.6e-79 299.7 189 74.6
THA.LOC104799837 Tarenaya hassleriana HOM05D006185 ORTHO05D007572 2.1e-79 299.3 188 72.9
TAR624G1115 Trochodendron aralioides HOM05D006185 ORTHO05D007572 2.7e-79 298.9 186 75.8
AL1G31710 Arabidopsis lyrata HOM05D006185 ORTHO05D007572 3.6e-79 298.5 189 74.1
Eucgr.C03305 Eucalyptus grandis HOM05D006185 ORTHO05D007572 3.6e-79 298.5 187 72.7
Carub.0001s1876 Capsella rubella HOM05D006185 ORTHO05D007572 3.0e-78 295.4 189 73.0
Solyc12g009180.2 Solanum lycopersicum HOM05D006185 ORTHO05D007572 3.0e-78 295.4 187 73.3
Sopen12g004130 Solanum pennellii HOM05D006185 ORTHO05D007572 3.0e-78 295.4 187 72.7
SalBow5G0266 Salvia bowleyana HOM05D006185 ORTHO05D007572 4.0e-78 295.0 186 74.7
Nitab4.5_0000073g0300 Nicotiana tabacum HOM05D006185 ORTHO05D007572 5.2e-78 294.7 187 73.3
FvH4_1g09020 Fragaria vesca HOM05D006185 ORTHO05D007572 6.7e-78 294.3 187 73.3
FAN19G1369 Fragaria x ananassa HOM05D006185 ORTHO05D007572 6.7e-78 294.3 187 73.3
Cc06_g12450 Coffea canephora HOM05D006185 ORTHO05D007572 8.8e-78 293.9 189 72.5
FAN26G0065 Fragaria x ananassa HOM05D006185 ORTHO05D007572 8.8e-78 293.9 187 72.7
FAN26G3397 Fragaria x ananassa HOM05D006185 ORTHO05D007572 8.8e-78 293.9 187 72.7
Migut.L01579 Erythranthe guttata HOM05D006185 ORTHO05D007572 1.2e-77 293.5 185 73.5
MELO3C015534.2 Cucumis melo HOM05D006185 ORTHO05D007572 1.5e-77 293.1 205 68.3
CAN.G1661.20 Capsicum annuum HOM05D006185 ORTHO05D007572 2.6e-77 292.4 189 71.4
Thhalv10008865m.g Eutrema salsugineum HOM05D006185 ORTHO05D007572 2.6e-77 292.4 189 72.0
PGR044G1997 Punica granatum HOM05D006185 ORTHO05D007572 2.6e-77 292.4 188 71.3
Nitab4.5_0004234g0030 Nicotiana tabacum HOM05D006185 ORTHO05D007572 4.4e-77 291.6 187 72.2
Potri.006G140000 Populus trichocarpa HOM05D006185 ORTHO05D007572 4.4e-77 291.6 189 72.5
GSVIVG01015050001 Vitis vinifera HOM05D006185 ORTHO05D007572 4.4e-77 291.6 189 70.9
Gorai.010G090200 Gossypium raimondii HOM05D006185 ORTHO05D007572 5.7e-77 291.2 185 73.5
CSS0028340 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 1.3e-76 290.0 188 73.9
PGSC0003DMG400002903 Solanum tuberosum HOM05D006185 ORTHO05D007572 1.7e-76 289.7 187 71.7
AT1G19130 Arabidopsis thaliana HOM05D006185 ORTHO05D007572 2.2e-76 289.3 189 72.0
Aa31LG7G3870 Aethionema arabicum HOM05D006185 ORTHO05D007572 2.8e-76 288.9 189 73.0
Ca_09309_v3 Cicer arietinum L. HOM05D006185 ORTHO05D007572 2.8e-76 288.9 186 71.5
Oeu062247.1 Olea europaea HOM05D006185 ORTHO05D007572 2.8e-76 288.9 191 73.3
CSS0016181 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 3.7e-76 288.5 187 73.8
TPR.G12562 Trifolium pratense HOM05D006185 ORTHO05D007572 1.1e-75 287.0 186 71.5
FAN23G1580 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.8e-75 286.2 187 71.7
Psat7g057800 Pisum sativum HOM05D006185 ORTHO05D007572 1.8e-75 286.2 185 70.8
RcHm_v2.0_Chr2g0095441 Rosa chinensis HOM05D006185 ORTHO05D007572 2.4e-75 285.8 189 70.4
SGA_v2.0_scaffold296G47554 Striga asiatica HOM05D006185 ORTHO05D007572 2.4e-75 285.8 186 72.6
C08p19220 Brassica napus HOM05D006185 ORTHO05D007572 3.1e-75 285.4 189 69.3
BolC8t49541H Brassica oleracea HOM05D006185 ORTHO05D007572 3.1e-75 285.4 189 69.3
BraA08t34935Z Brassica rapa HOM05D006185 ORTHO05D007572 3.1e-75 285.4 189 69.3
vmacro17122 Vaccinium macrocarpon HOM05D006185 ORTHO05D007572 3.1e-75 285.4 187 70.1
A08p30000 Brassica napus HOM05D006185 ORTHO05D007572 4.1e-75 285.0 189 69.3
BcaC07g38980 Brassica carinata HOM05D006185 ORTHO05D007572 7.0e-75 284.3 189 68.8
Lalb_Chr07g0181271 Lupinus albus HOM05D006185 ORTHO05D007572 9.1e-75 283.9 187 71.7
Sabra06G0109300 Salix brachista HOM05D006185 ORTHO05D007572 2.0e-74 282.7 220 63.2
Lj7A688T82 Lonicera japonica HOM05D006185 ORTHO05D007572 2.7e-74 282.3 186 71.0
Lj4g0025093 Lotus japonicus HOM05D006185 ORTHO05D007572 2.7e-74 282.3 187 71.7
Rhsim05G0005100 Rhododendron simsii HOM05D006185 ORTHO05D007572 2.7e-74 282.3 188 70.7
Hund26091 Selenicereus undatus HOM05D006185 ORTHO05D007572 4.5e-74 281.6 187 68.4
BcaB03g12935 Brassica carinata HOM05D006185 ORTHO05D007572 7.7e-74 280.8 190 68.4
Lsat_1_v5_gn_8_85701 Lactuca sativa HOM05D006185 ORTHO05D007572 1.7e-73 279.6 188 68.6
Sc08g0009100 Simmondsia chinensis HOM05D006185 ORTHO05D007572 5.0e-73 278.1 188 68.6
ECA236G4868 Erigeron canadensis HOM05D006185 ORTHO05D007572 3.2e-72 275.4 186 67.2
Phvul.003G129600 Phaseolus vulgaris HOM05D006185 ORTHO05D007572 4.2e-72 275.0 188 68.6
unitig_699.g19263 Utricularia gibba HOM05D000454 ORTHO05D007572 7.2e-72 274.2 182 69.2
Medtr4g125100 Medicago truncatula HOM05D006185 ORTHO05D007572 1.2e-71 273.5 187 68.4
HanXRQChr04g0125931 Helianthus annuus HOM05D006185 ORTHO05D007572 2.7e-71 272.3 187 67.9
EL10Ac8g18996 Beta vulgaris HOM05D006185 ORTHO05D007572 3.6e-71 271.9 187 67.9
VMungo1215G2404 Vigna mungo HOM05D006185 ORTHO05D007572 3.6e-71 271.9 188 67.6
Nn6g35681 Nelumbo nucifera HOM05D006185 ORTHO05D007572 6.1e-71 271.2 186 68.8
Actinidia30236 Actinidia chinensis HOM05D006185 ORTHO05D007572 1.0e-70 270.4 226 58.4
Glyma.13G111600 Glycine max HOM05D006185 ORTHO05D007572 4.0e-70 268.5 191 67.0
DCAR_010492 Daucus carota HOM05D006185 ORTHO05D007572 1.2e-69 266.9 186 67.2
AUR62028278 Chenopodium quinoa HOM05D006185 ORTHO05D007572 7.5e-69 264.2 185 68.1
AUR62028304 Chenopodium quinoa HOM05D006185 ORTHO05D007572 9.8e-69 263.8 182 65.9
Aqoxy7G04191 Aquilegia oxysepala HOM05D006185 ORTHO05D007572 2.2e-68 262.7 189 68.3
AUR62025298 Chenopodium quinoa HOM05D006185 ORTHO05D007572 6.3e-68 261.2 182 65.4
AUR62025276 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.4e-67 260.0 144 80.6
MBI13_g00698_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 3.1e-67 258.8 193 67.4
HanXRQChr06g0168681 Helianthus annuus HOM05D006185 ORTHO05D007572 1.6e-66 256.5 183 64.5
Eucgr.C00790 Eucalyptus grandis HOM05D006185 ORTHO05D007572 5.9e-66 254.6 193 65.8
Nn5g27974 Nelumbo nucifera HOM05D006185 ORTHO05D007572 3.8e-65 251.9 186 64.0
Sed0027040 Sechium edule HOM05D006185 ORTHO05D007572 1.0e-62 243.8 146 75.3
Zm00001eb040490 Zea mays HOM05D006185 ORTHO05D007572 2.3e-62 242.7 184 63.0
arahy.Tifrunner.gnm1.ann1.Y0H2IU Arachis hypogaea HOM05D006185 ORTHO05D007572 6.8e-62 241.1 186 62.9
HPP92_004362 Vanilla planifolia HOM05D006185 ORTHO05D007572 6.8e-62 241.1 189 64.6
ATR0006G060 Amborella trichopoda HOM05D006185 ORTHO05D007572 8.8e-62 240.7 192 62.0
Os08g0455800 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 2.0e-61 239.6 184 60.9
arahy.Tifrunner.gnm1.ann1.85MSRM Arachis hypogaea HOM05D006185 ORTHO05D007572 4.4e-61 238.4 186 62.4
ECA236G2592 Erigeron canadensis HOM05D006185 ORTHO05D007572 6.3e-60 234.6 185 61.6
Lalb_Chr12g0200241 Lupinus albus HOM05D006185 ORTHO05D007572 3.1e-59 232.3 186 59.1
Os06g0198500 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 4.1e-59 231.9 184 60.3
MBI19_g05291_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 9.2e-59 230.7 178 64.6
Gohir.A06G078100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 2.0e-58 229.6 185 61.1
SEGI_13235 Sequoiadendron giganteum HOM05D006185 ORTHO05D007572 2.7e-58 229.2 185 62.2
Lsat_1_v5_gn_8_85721 Lactuca sativa HOM05D006185 ORTHO05D007572 1.0e-57 227.3 184 57.6
MBI13_g47248_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 5.2e-54 214.9 193 58.0
Gohir.D06G077100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 1.2e-53 213.8 131 73.3
Mapoly0007s0060 Marchantia polymorpha HOM05D006185 ORTHO05D007572 2.6e-53 212.6 184 57.1
SMO340G0144 Selaginella moellendorffii HOM05D006185 ORTHO05D007572 3.7e-52 208.8 185 54.6
Pp3c9_22400 Physcomitrium patens HOM05D006185 ORTHO05D007572 6.6e-49 198.0 187 51.9
MSTRG.26479 Avicennia marina HOM05D006185 ORTHO05D007572 1.4e-35 153.7 110 66.4
Ah.14g084750 Amaranthus hybridus HOM05D006185 ORTHO05D007572 1.5e-32 143.7 108 60.2
CARHR019730 Cardamine hirsuta HOM05D006185 ORTHO05D007572 1.5e-29 133.7 81 75.3
FAN28G1197 Fragaria x ananassa HOM05D006185 ORTHO05D007572 3.2e-27 125.9 84 67.9
Os06g0198600 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 8.6e-25 117.9 115 53.9
MBI14_g46913_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 3.3e-24 115.9 99 60.6
Eucgr.C00789 Eucalyptus grandis HOM05D006185 ORTHO05D007572 4.3e-16 89.0 87 50.6
BcaB02g10882 Brassica carinata HOM05D006185 ORTHO05D007572 1.3e-09 67.4 78 43.6
PRCOL_00002298 Prasinoderma coloniale HOM05D006185 ORTHO05D007572 6.9e-06 55.1 186 25.3


User provided reference genes

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