Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p065815 Quercus lobata HOM05D006787 ORTHO05D008366 0.0e+00 1218.4 658 100.0
QL10p064688 Quercus lobata HOM05D006787 ORTHO05D008366 0.0e+00 1195.3 658 98.2
CiPaw.02G125400 Carya illinoinensis HOM05D006787 ORTHO05D008366 4.3e-281 971.1 670 79.3
Haze_11111 Corylus avellana HOM05D006787 ORTHO05D008366 3.0e-258 895.2 662 74.0
Prupe.6G118500 Prunus persica HOM05D006787 ORTHO05D008366 2.3e-242 842.4 661 69.0
Potri.017G001600 Populus trichocarpa HOM05D006787 ORTHO05D008366 9.8e-241 837.0 670 71.3
Manes.01G009700 Manihot esculenta HOM05D006787 ORTHO05D008366 3.7e-240 835.1 668 69.2
Nn7g37422 Nelumbo nucifera HOM05D006787 ORTHO05D008366 1.7e-237 826.2 660 67.9
Atru.chr3.1966 Acer truncatum HOM05D006787 ORTHO05D008366 1.1e-236 823.5 656 70.9
MD11G1156300 Malus domestica HOM05D006787 ORTHO05D008366 7.2e-236 820.8 669 70.0
Thecc.05G000800 Theobroma cacao HOM05D006787 ORTHO05D008366 4.0e-234 815.1 664 64.3
Duzib168G0144 Durio zibethinus HOM05D006787 ORTHO05D008366 3.2e-231 805.4 662 66.3
Dinv33252 Davidia involucrata HOM05D006787 ORTHO05D008366 2.7e-230 802.4 676 66.6
TWI63G1373 Tripterygium wilfordii HOM05D006787 ORTHO05D008366 2.7e-230 802.4 668 64.5
Glyma.03G015700 Glycine max HOM05D006787 ORTHO05D008366 2.9e-229 798.9 657 69.9
RcHm_v2.0_Chr2g0084391 Rosa chinensis HOM05D006787 ORTHO05D008366 5.6e-228 794.7 659 68.9
Ciclev10019183m.g Citrus clementina HOM05D006787 ORTHO05D008366 9.5e-228 793.9 673 68.1
Sabra17G0005700 Salix brachista HOM05D006787 ORTHO05D008366 2.1e-227 792.7 670 67.3
Glyma.07G076000 Glycine max HOM05D006787 ORTHO05D008366 3.6e-227 792.0 661 68.5
FAN26G1372 Fragaria x ananassa HOM05D006787 ORTHO05D008366 1.0e-226 790.4 660 66.7
Cpa.g.sc9.243 Carica papaya HOM05D006787 ORTHO05D008366 4.0e-226 788.5 671 65.9
FAN23G2311 Fragaria x ananassa HOM05D006787 ORTHO05D008366 5.2e-226 788.1 670 68.7
VMungo0331G0945 Vigna mungo HOM05D006787 ORTHO05D008366 5.2e-226 788.1 659 67.2
FvH4_1g00100 Fragaria vesca HOM05D006787 ORTHO05D008366 8.9e-226 787.3 660 68.8
Phvul.010G093100 Phaseolus vulgaris HOM05D006787 ORTHO05D008366 2.0e-225 786.2 664 67.2
TAR636G3644 Trochodendron aralioides HOM05D006787 ORTHO05D008366 1.3e-224 783.5 666 64.9
FAN28G0724 Fragaria x ananassa HOM05D006787 ORTHO05D008366 6.4e-224 781.2 670 67.8
Gohir.D06G185000 Gossypium hirsutum HOM05D006787 ORTHO05D008366 7.0e-223 777.7 660 65.0
Cfa008529 Carpinus fangiana HOM05D006787 ORTHO05D008366 1.7e-221 773.1 551 76.0
PGR142G3161 Punica granatum HOM05D006787 ORTHO05D008366 1.2e-219 766.9 673 67.3
ClCG06G009900 Citrullus lanatus HOM05D006787 ORTHO05D008366 2.3e-218 762.7 666 63.8
Lalb_Chr10g0097341 Lupinus albus HOM05D006787 ORTHO05D008366 5.2e-218 761.5 669 64.4
Hma1.2p1_0000F.1_g000320 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 8.9e-218 760.8 590 69.2
Lj3g0015930 Lotus japonicus HOM05D006787 ORTHO05D008366 3.4e-217 758.8 667 65.1
Actinidia18386 Actinidia chinensis HOM05D006787 ORTHO05D003440 4.4e-217 758.4 690 63.9
Medtr8g432340 Medicago truncatula HOM05D006787 ORTHO05D008366 4.9e-216 755.0 659 66.6
Carub.0004s1319 Capsella rubella HOM05D006787 ORTHO05D008366 1.9e-215 753.1 590 69.8
BraA03t11058Z Brassica rapa HOM05D000200 ORTHO05D000262 4.1e-215 751.9 588 70.1
Lju124A5G21 Lonicera japonica HOM05D006787 ORTHO05D008366 9.2e-215 750.7 685 62.5
Sp4g14240 Schrenkiella parvula HOM05D006787 ORTHO05D008366 1.7e-213 746.5 590 68.6
Aa31LG5G5150 Aethionema arabicum HOM05D006787 ORTHO05D008366 3.9e-213 745.3 597 68.3
COL.COLO4_07294 Corchorus olitorius HOM05D006787 ORTHO05D008366 3.9e-213 745.3 636 65.4
Gorai.010G216300 Gossypium raimondii HOM05D006787 ORTHO05D008366 8.6e-213 744.2 660 62.6
AL4G27180 Arabidopsis lyrata HOM05D006787 ORTHO05D008366 1.5e-212 743.4 584 69.7
arahy.Tifrunner.gnm1.ann1.M1INQM Arachis hypogaea HOM05D006787 ORTHO05D008366 1.9e-212 743.0 670 64.3
arahy.Tifrunner.gnm1.ann1.RN5NMY Arachis hypogaea HOM05D006787 ORTHO05D008366 4.3e-212 741.9 670 64.3
Thhalv10016356m.g Eutrema salsugineum HOM05D006787 ORTHO05D008366 2.8e-211 739.2 591 68.7
CSS0000740 Camellia sinensis var. sinensis HOM05D006787 ORTHO05D008366 6.2e-211 738.0 642 64.5
TPR.G1526 Trifolium pratense HOM05D006787 ORTHO05D008366 6.2e-211 738.0 663 64.0
Hund22687 Selenicereus undatus HOM05D006787 ORTHO05D008366 2.0e-209 733.0 661 60.1
BolC3t14481H Brassica oleracea HOM05D006787 ORTHO05D008366 4.4e-209 731.9 586 67.2
CARHR125600 Cardamine hirsuta HOM05D006787 ORTHO05D008366 5.8e-209 731.5 596 66.8
Ca_25786_v3 Cicer arietinum L. HOM05D006787 ORTHO05D008366 1.7e-208 729.9 659 63.7
Eucgr.H00246 Eucalyptus grandis HOM05D006787 ORTHO05D008366 1.9e-207 726.5 673 61.7
MBI10_g27212_MAGBIO Magnolia biondii HOM05D006787 ORTHO05D008366 2.4e-207 726.1 674 59.3
Gohir.A06G175100 Gossypium hirsutum HOM05D006787 ORTHO05D008366 9.2e-207 724.2 660 60.5
THA.LOC104800940 Tarenaya hassleriana HOM05D006787 ORTHO05D008366 3.0e-205 719.2 627 64.1
AT2G31890 Arabidopsis thaliana HOM05D006787 ORTHO05D008366 5.1e-205 718.4 593 68.3
EL10Ac3g06180 Beta vulgaris HOM05D006787 ORTHO05D008366 1.9e-204 716.5 659 59.0
MELO3C008513.2 Cucumis melo HOM05D006787 ORTHO05D008366 6.8e-202 708.0 673 62.7
CsaV3_2G011300 Cucumis sativus L. HOM05D006787 ORTHO05D008366 4.9e-200 701.8 673 62.3
Cc03_g16180 Coffea canephora HOM05D006787 ORTHO05D008366 8.4e-200 701.0 607 66.1
MSTRG.11562 Avicennia marina HOM05D006787 ORTHO05D008366 5.3e-194 681.8 642 60.9
PSO357G0106 Papaver somniferum HOM05D006787 ORTHO05D008366 2.9e-192 676.0 666 57.8
Hma1.2p1_0000F.1_g000310 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 8.4e-192 674.5 567 65.1
Lsat_1_v5_gn_6_92560 Lactuca sativa HOM05D006787 ORTHO05D008366 1.1e-191 674.1 603 62.4
CANSAT56G3581 Cannabis sativa HOM05D006787 ORTHO05D008366 1.3e-189 667.2 644 61.2
Migut.O00275 Erythranthe guttata HOM05D006787 ORTHO05D008366 8.7e-189 664.5 621 60.7
AUR62023690 Chenopodium quinoa HOM05D006787 ORTHO05D008366 3.3e-188 662.5 587 59.6
A03p17910 Brassica napus HOM05D006787 ORTHO05D008366 9.6e-188 661.0 523 69.6
Sed0010252 Sechium edule HOM05D006787 ORTHO05D008366 2.1e-187 659.8 618 63.8
Nitab4.5_0006083g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 2.8e-187 659.4 609 63.1
Psat4g152520 Pisum sativum HOM05D006787 ORTHO05D008366 1.4e-186 657.1 663 58.7
Sc19g0002430 Simmondsia chinensis HOM05D006787 ORTHO05D008366 5.3e-186 655.2 657 58.0
C03p21010 Brassica napus HOM05D006787 ORTHO05D008366 1.2e-185 654.1 543 66.5
PGSC0003DMG400006459 Solanum tuberosum HOM05D006787 ORTHO05D008366 1.2e-185 654.1 606 62.5
Nitab4.5_0005148g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 3.4e-185 652.5 597 64.3
Aqoxy4G00084 Aquilegia oxysepala HOM05D006787 ORTHO05D008366 7.6e-185 651.4 669 56.2
Sopen12g008290 Solanum pennellii HOM05D006787 ORTHO05D008366 1.7e-184 650.2 695 55.0
SalBow5G4178 Salvia bowleyana HOM05D006787 ORTHO05D008366 1.2e-182 644.0 620 62.4
Peaxi162Scf00057g01911 Petunia axillaris HOM05D006787 ORTHO05D008366 1.6e-182 643.7 690 56.2
Solyc12g017510.2 Solanum lycopersicum HOM05D006787 ORTHO05D008366 2.1e-182 643.3 695 55.1
HanXRQChr12g0374641 Helianthus annuus HOM05D006787 ORTHO05D008366 1.8e-181 640.2 644 58.4
CAN.G207.7 Capsicum annuum HOM05D006787 ORTHO05D008366 2.5e-180 636.3 689 54.3
ATR0743G046 Amborella trichopoda HOM05D006787 ORTHO05D008366 3.3e-180 636.0 616 59.7
SGA_v2.0_scaffold25G10734 Striga asiatica HOM05D006787 ORTHO05D008366 8.1e-179 631.3 637 57.3
AUR62002496 Chenopodium quinoa HOM05D006787 ORTHO05D008366 3.1e-178 629.4 655 53.9
Oeu014980.1 Olea europaea HOM05D006787 ORTHO05D008366 9.0e-178 627.9 521 69.7
HPP92_011440 Vanilla planifolia HOM05D006787 ORTHO05D008366 6.5e-176 621.7 599 61.9
GSVIVG01038263001 Vitis vinifera HOM05D006787 ORTHO05D008366 3.2e-175 619.4 454 73.1
COL.COLO4_16044 Corchorus olitorius HOM05D006787 ORTHO05D008366 6.7e-173 611.7 609 59.4
ECA248G2491 Erigeron canadensis HOM05D006787 ORTHO05D008366 8.7e-173 611.3 596 59.6
TPR.G9807 Trifolium pratense HOM05D006787 ORTHO05D008366 4.5e-169 599.0 653 54.8
vmacro00728 Vaccinium macrocarpon HOM05D006787 ORTHO05D008366 1.9e-164 583.6 440 70.0
unitig_22.g5322 Utricularia gibba HOM05D006787 ORTHO05D008366 5.5e-151 538.9 545 59.3
Os03g0425000 Oryza sativa ssp. japonica HOM05D006787 ORTHO05D008366 1.0e-149 534.6 546 55.5
Zm00001eb120920 Zea mays HOM05D006787 ORTHO05D008366 2.9e-144 516.5 546 54.9
SEGI_12983 Sequoiadendron giganteum HOM05D006787 ORTHO05D008366 8.9e-117 425.2 614 45.0
BcaB01g04009 Brassica carinata HOM05D006787 ORTHO05D008366 1.1e-103 381.7 280 70.4
Mapoly0069s0042 Marchantia polymorpha HOM05D006787 ORTHO05D008366 3.9e-80 303.5 632 39.1
Mapoly0276s0001 Marchantia polymorpha HOM05D006787 ORTHO05D008366 3.9e-80 303.5 632 39.1
Pp3c3_28000 Physcomitrium patens HOM05D006787 ORTHO05D008366 3.0e-64 250.8 443 36.8
AagrBONN_evm.TU.Sc2ySwM_344.5468 Anthoceros agrestis HOM05D006787 ORTHO05D008366 7.2e-50 203.0 418 33.3
BcaC04g19536 Brassica carinata HOM05D006787 ORTHO05D008366 4.2e-34 150.6 135 61.5
AagrBONN_evm.TU.Sc2ySwM_344.5464 Anthoceros agrestis HOM05D006787 ORTHO05D008366 6.1e-33 146.7 190 45.8
VMungo0720G2947 Vigna mungo HOM05D006787 ORTHO05D008366 1.1e-29 136.0 150 50.0
DCAR_027490 Daucus carota HOM05D004281 ORTHO05D004839 8.2e-22 109.8 150 42.0
SMO137G0272 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 4.1e-21 107.5 188 39.9
VMungo0647G0587 Vigna mungo HOM05D006787 ORTHO05D008366 1.1e-13 82.8 108 43.5
VMungo0464G0544 Vigna mungo HOM05D006787 ORTHO05D008366 1.2e-12 79.3 109 43.1
CBR_g41140 Chara braunii HOM05D006787 ORTHO05D008366 2.7e-12 78.2 207 30.4
SMO137G0070 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 2.9e-11 74.7 99 46.5
Cre09.g389541 Chlamydomonas reinhardtii HOM05D006787 ORTHO05D008366 4.2e-10 70.9 115 33.9
SMO137G0174 Selaginella moellendorffii HOM05D066076 ORTHO05D008366 1.6e-09 68.9 55 54.5
SMO134G0111 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 4.7e-09 67.4 412 24.5
SMO137G0071 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 2.3e-08 65.1 85 37.6
PRCOL_00001133 Prasinoderma coloniale HOM05D006787 ORTHO05D008366 5.7e-07 60.5 276 23.6


User provided reference genes

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