Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p018629 Quercus lobata HOM05D001674 ORTHO05D008599 0.0e+00 3127.4 1704 100.0
Haze_07676 Corylus avellana HOM05D001674 ORTHO05D008599 0.0e+00 2133.2 1497 81.6
Prupe.5G200400 Prunus persica HOM05D001674 ORTHO05D008599 0.0e+00 2024.2 1721 70.5
Thecc.03G096700 Theobroma cacao HOM05D001674 ORTHO05D008599 0.0e+00 2013.0 1725 69.3
TAR629G0913 Trochodendron aralioides HOM05D001674 ORTHO05D008599 0.0e+00 1976.8 1753 67.2
Duzib068G0733 Durio zibethinus HOM05D001674 ORTHO05D008599 0.0e+00 1971.1 1721 68.5
Atru.chr9.280 Acer truncatum HOM05D001674 ORTHO05D008599 0.0e+00 1945.2 1729 68.2
Ciclev10018469m.g Citrus clementina HOM05D001674 ORTHO05D008599 0.0e+00 1929.1 1723 68.0
GSVIVG01007917001 Vitis vinifera HOM05D001674 ORTHO05D008599 0.0e+00 1923.3 1654 66.4
COL.COLO4_36885 Corchorus olitorius HOM05D001674 ORTHO05D008599 0.0e+00 1913.3 1722 67.1
Gorai.007G039000 Gossypium raimondii HOM05D001674 ORTHO05D008599 0.0e+00 1898.6 1724 66.5
RcHm_v2.0_Chr7g0182421 Rosa chinensis HOM05D001674 ORTHO05D008599 0.0e+00 1887.8 1723 66.4
Gohir.A11G032900 Gossypium hirsutum HOM05D001674 ORTHO05D008599 0.0e+00 1874.0 1724 66.2
FAN08G0876 Fragaria x ananassa HOM05D001674 ORTHO05D008599 0.0e+00 1854.0 1727 66.2
FAN13G3105 Fragaria x ananassa HOM05D001674 ORTHO05D008599 0.0e+00 1845.5 1725 66.0
FvH4_5g14340 Fragaria vesca HOM05D001674 ORTHO05D008599 0.0e+00 1844.7 1725 65.9
FAN18G2329 Fragaria x ananassa HOM05D001674 ORTHO05D008599 0.0e+00 1839.7 1725 65.9
Manes.06G087600 Manihot esculenta HOM05D001674 ORTHO05D008599 0.0e+00 1823.1 1813 63.3
CANSAT80G0851 Cannabis sativa HOM05D001674 ORTHO05D008599 0.0e+00 1815.4 1731 65.6
Sabra12G0048200 Salix brachista HOM05D001674 ORTHO05D008599 0.0e+00 1785.4 1931 58.6
Nn4g23353 Nelumbo nucifera HOM05D001674 ORTHO05D008599 0.0e+00 1785.0 1752 61.6
VMungo1215G3312 Vigna mungo HOM05D001674 ORTHO05D008599 0.0e+00 1781.9 1716 63.5
Glyma.17G076400 Glycine max HOM05D001674 ORTHO05D008599 0.0e+00 1779.6 1725 63.4
Phvul.003G186700 Phaseolus vulgaris HOM05D001674 ORTHO05D008599 0.0e+00 1779.2 1724 63.3
Lj4g0011824 Lotus japonicus HOM05D001674 ORTHO05D008599 0.0e+00 1767.7 1734 62.7
Lalb_Chr13g0302981 Lupinus albus HOM05D001674 ORTHO05D008599 0.0e+00 1763.4 1731 62.4
Glyma.05G023300 Glycine max HOM05D001674 ORTHO05D008599 0.0e+00 1762.7 1726 63.0
TWI15G1152 Tripterygium wilfordii HOM05D001674 ORTHO05D008599 0.0e+00 1752.3 1723 62.7
vmacro17586 Vaccinium macrocarpon HOM05D001674 ORTHO05D008599 0.0e+00 1738.8 1722 61.6
arahy.Tifrunner.gnm1.ann1.MMN4BF Arachis hypogaea HOM05D001674 ORTHO05D008599 0.0e+00 1732.6 1727 61.6
Hma1.2p1_0060F.1_g033350 Hydrangea macrophylla HOM05D001674 ORTHO05D008599 0.0e+00 1729.1 1697 63.2
MELO3C017205.2 Cucumis melo HOM05D001674 ORTHO05D008599 0.0e+00 1722.6 1730 62.4
TPR.G2046 Trifolium pratense HOM05D001674 ORTHO05D008599 0.0e+00 1721.1 1725 62.4
Sed0027646 Sechium edule HOM05D001674 ORTHO05D008599 0.0e+00 1712.2 1733 62.3
CsaV3_1G002700 Cucumis sativus L. HOM05D001674 ORTHO05D008599 0.0e+00 1706.0 1726 61.9
Medtr4g109230 Medicago truncatula HOM05D001674 ORTHO05D008599 0.0e+00 1691.8 1731 61.5
PGR083G0537 Punica granatum HOM05D001674 ORTHO05D008599 0.0e+00 1691.8 1727 59.2
ClCG06G015860 Citrullus lanatus HOM05D001674 ORTHO05D008599 0.0e+00 1683.7 1727 61.2
Ca_21793_v3 Cicer arietinum L. HOM05D001674 ORTHO05D008599 0.0e+00 1659.8 1699 61.9
Aqoxy3G00452 Aquilegia oxysepala HOM05D001674 ORTHO05D008599 0.0e+00 1651.0 1729 60.0
Psat4g048680 Pisum sativum HOM05D001674 ORTHO05D008599 0.0e+00 1639.8 1731 60.8
Potri.012G066900 Populus trichocarpa HOM05D001674 ORTHO05D008599 0.0e+00 1637.1 1614 63.3
CiPaw.11G049600 Carya illinoinensis HOM05D001674 ORTHO05D008599 0.0e+00 1628.2 1312 75.6
Actinidia04849 Actinidia chinensis HOM05D001674 ORTHO05D008599 0.0e+00 1625.5 1444 67.6
Cc00_g02250 Coffea canephora HOM05D001674 ORTHO05D008599 0.0e+00 1575.5 1789 56.2
Eucgr.B00566 Eucalyptus grandis HOM05D001674 ORTHO05D008599 0.0e+00 1547.7 1508 64.9
PSO478G4640 Papaver somniferum HOM05D001674 ORTHO05D008599 0.0e+00 1530.4 1802 56.1
Nitab4.5_0004511g0020 Nicotiana tabacum HOM05D001674 ORTHO05D008599 0.0e+00 1520.0 1695 58.2
DCAR_031671 Daucus carota HOM05D001674 ORTHO05D008599 0.0e+00 1518.8 1723 55.7
PSO017G4474 Papaver somniferum HOM05D001674 ORTHO05D008599 0.0e+00 1505.0 1804 55.8
Oeu032213.1 Olea europaea HOM05D001674 ORTHO05D008599 0.0e+00 1500.7 1754 57.1
Rhsim08G0149500 Rhododendron simsii HOM05D001674 ORTHO05D008599 0.0e+00 1484.5 1488 60.0
Gohir.D11G036200 Gossypium hirsutum HOM05D001674 ORTHO05D008599 0.0e+00 1476.5 1193 73.1
Hund02613 Selenicereus undatus HOM05D001674 ORTHO05D008599 0.0e+00 1464.5 1732 54.4
AUR62008489 Chenopodium quinoa HOM05D001674 ORTHO05D008599 0.0e+00 1461.8 1781 54.1
AUR62021608 Chenopodium quinoa HOM05D001674 ORTHO05D008599 0.0e+00 1458.4 1721 55.0
CAN.G479.33 Capsicum annuum HOM05D001674 ORTHO05D008599 0.0e+00 1456.4 1718 56.2
MSTRG.9602 Avicennia marina HOM05D001674 ORTHO05D008599 0.0e+00 1453.3 1730 55.7
Sopen03g034510 Solanum pennellii HOM05D001674 ORTHO05D008599 0.0e+00 1432.9 1706 55.8
Migut.D01672 Erythranthe guttata HOM05D001674 ORTHO05D008599 0.0e+00 1414.4 1717 51.9
MD14G1208500 Malus domestica HOM05D001674 ORTHO05D008599 0.0e+00 1402.5 1228 69.1
Cpa.g.sc94.3 Carica papaya HOM05D001674 ORTHO05D008599 0.0e+00 1388.6 1255 67.5
ECA247G0462 Erigeron canadensis HOM05D001674 ORTHO05D008599 0.0e+00 1369.0 1702 53.7
HanXRQChr04g0107361 Helianthus annuus HOM05D001674 ORTHO05D008599 0.0e+00 1365.1 1699 52.5
SalBow7G3498 Salvia bowleyana HOM05D001674 ORTHO05D008599 0.0e+00 1365.1 1735 52.0
Lsat_1_v5_gn_1_13760 Lactuca sativa HOM05D001674 ORTHO05D008599 0.0e+00 1330.9 1688 53.0
SGA_v2.0_scaffold3G01735 Striga asiatica HOM05D001674 ORTHO05D008599 0.0e+00 1312.4 1740 50.5
ATR0064G082 Amborella trichopoda HOM05D001674 ORTHO05D008599 0.0e+00 1306.6 1390 59.4
Dinv10682 Davidia involucrata HOM05D001674 ORTHO05D008599 0.0e+00 1260.0 957 73.1
Peaxi162Scf00201g00021 Petunia axillaris HOM05D001674 ORTHO05D008599 0.0e+00 1256.9 1256 62.8
PGSC0003DMG400024553 Solanum tuberosum HOM05D001674 ORTHO05D008599 0.0e+00 1243.8 1486 56.5
Sc12g0006570 Simmondsia chinensis HOM05D001674 ORTHO05D008599 0.0e+00 1229.5 1329 58.7
Solyc03g115510.3 Solanum lycopersicum HOM05D001674 ORTHO05D008599 0.0e+00 1213.7 1247 62.0
Lj5A106T70 Lonicera japonica HOM05D001674 ORTHO05D008599 0.0e+00 1209.5 1264 61.1
SEGI_10628 Sequoiadendron giganteum HOM05D001674 ORTHO05D008599 0.0e+00 1111.7 1730 46.2
Actinidia09243 Actinidia chinensis HOM05D001674 ORTHO05D008599 0.0e+00 1106.7 951 67.6
Zm00001eb108430 Zea mays HOM05D001674 ORTHO05D008599 0.0e+00 1080.1 1526 49.4
Dinv38777 Davidia involucrata HOM05D001674 ORTHO05D008599 1.0e-305 1054.3 820 71.5
Nitab4.5_0020510g0010 Nicotiana tabacum HOM05D001674 ORTHO05D008599 1.2e-303 1047.3 1042 65.2
Ah.02g113890 Amaranthus hybridus HOM05D001674 ORTHO05D008599 3.7e-284 982.6 1475 48.4
unitig_37.g12722 Utricularia gibba HOM05D001674 ORTHO05D008599 1.7e-252 877.5 1131 51.6
Pp3c11_9170 Physcomitrium patens HOM05D001674 ORTHO05D008599 3.8e-244 849.7 1753 40.3
SMO117G0045 Selaginella moellendorffii HOM05D001674 ORTHO05D008599 2.0e-237 827.4 1255 48.0
Dinv10683 Davidia involucrata HOM05D001674 ORTHO05D008599 1.8e-206 724.5 746 58.7
Os06g0235300 Oryza sativa ssp. japonica HOM05D001674 ORTHO05D008599 4.8e-191 673.3 1080 48.3
Actinidia09244 Actinidia chinensis HOM05D001674 ORTHO05D008599 4.1e-174 617.1 733 52.1
AagrBONN_evm.TU.Sc2ySwM_228.3354 Anthoceros agrestis HOM05D001674 ORTHO05D008599 6.2e-170 603.2 865 46.4
CDE07G0117 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 2.9e-151 541.2 557 59.2
CDE07G0766 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 8.6e-148 529.6 859 44.8
Dinv38778 Davidia involucrata HOM05D001674 ORTHO05D008599 7.4e-131 473.4 749 45.7
Pp3c1_9760 Physcomitrium patens HOM05D001674 ORTHO05D008599 1.6e-130 472.2 1158 34.4
Actinidia09199 Actinidia chinensis HOM05D001674 ORTHO05D008599 5.7e-99 367.5 707 40.0
Lj5A106T69 Lonicera japonica HOM05D001674 ORTHO05D008599 7.2e-94 350.5 495 46.9
MD14G1208300 Malus domestica HOM05D001674 ORTHO05D008599 5.5e-78 297.7 238 66.8
Ah.02g113880 Amaranthus hybridus HOM05D001674 ORTHO05D008599 2.1e-77 295.8 257 59.5
Rhsim08G0149700 Rhododendron simsii HOM05D001674 ORTHO05D008599 4.3e-62 245.0 212 65.6
Nitab4.5_0002881g0120 Nicotiana tabacum HOM05D001674 ORTHO05D008599 7.3e-62 244.2 451 40.4
Cpa.g.sc94.4 Carica papaya HOM05D001674 ORTHO05D008599 8.6e-47 194.1 147 67.3
Actinidia09209 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.6e-45 189.9 165 64.8
CDE07G0655 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 3.7e-42 178.7 166 57.2
unitig_37.g12721 Utricularia gibba HOM05D001674 ORTHO05D008599 8.3e-42 177.6 193 51.8
Actinidia09203 Actinidia chinensis HOM05D001674 ORTHO05D008599 3.9e-39 168.7 131 74.0
PRCOL_00000483 Prasinoderma coloniale HOM05D001674 ORTHO05D008599 5.8e-35 154.8 1343 23.3
CBR_g23198 Chara braunii HOM05D000019 ORTHO05D000048 1.3e-34 153.7 258 37.6
Actinidia09211 Actinidia chinensis HOM05D001674 ORTHO05D008599 2.7e-32 146.0 294 40.8
Actinidia09202 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.7e-26 126.7 205 46.3
TAR376G0971 Trochodendron aralioides HOM05D001674 ORTHO05D008599 6.4e-26 124.8 126 54.8
CBR_g23193 Chara braunii HOM05D000019 ORTHO05D000048 9.3e-25 120.9 105 62.9
MCO15G104 Micromonas commoda HOM05D001674 ORTHO05D008599 1.0e-23 117.5 251 33.1
Cre16.g679400 Chlamydomonas reinhardtii HOM05D001674 ORTHO05D008599 4.0e-20 105.5 313 28.1
PGSC0003DMG400006818 Solanum tuberosum HOM05D001674 ORTHO05D008599 6.9e-20 104.8 150 43.3
Psat3g111480 Pisum sativum HOM05D001026 ORTHO05D008599 3.5e-16 92.4 59 76.3
CBR_g23210 Chara braunii HOM05D000019 ORTHO05D000002 5.6e-14 85.1 61 57.4
CBR_g23187 Chara braunii HOM05D001674 ORTHO05D000353 1.6e-13 83.6 65 61.5
Actinidia09210 Actinidia chinensis HOM05D001674 ORTHO05D008599 5.8e-11 75.1 207 34.3
unitig_37.g12720 Utricularia gibba HOM05D001674 ORTHO05D008599 1.6e-08 67.0 263 28.1
Nn1g01396 Nelumbo nucifera HOM05D001674 ORTHO05D008599 4.6e-08 65.5 53 71.7


User provided reference genes

Program Settings