Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p016165 Quercus lobata HOM05D003823 ORTHO05D004866 2.8e-108 395.2 188 100.0
Cfa018968 Carpinus fangiana HOM05D000046 ORTHO05D004866 2.9e-105 385.2 188 97.3
CiPaw.11G041500 Carya illinoinensis HOM05D003823 ORTHO05D004866 1.1e-104 383.3 187 97.3
MD06G1190100 Malus domestica HOM05D003823 ORTHO05D004866 1.1e-104 383.3 188 95.7
MD14G1197000 Malus domestica HOM05D003823 ORTHO05D004866 1.1e-104 383.3 188 95.7
CANSAT80G0583 Cannabis sativa HOM05D003823 ORTHO05D004866 1.4e-104 382.9 187 97.3
ClCG06G016300 Citrullus lanatus HOM05D003823 ORTHO05D004866 1.4e-104 382.9 188 95.2
MELO3C017163.2 Cucumis melo HOM05D003823 ORTHO05D004866 1.4e-104 382.9 188 95.2
CsaV3_1G002230 Cucumis sativus L. HOM05D003823 ORTHO05D004866 1.4e-104 382.9 188 95.2
RcHm_v2.0_Chr7g0180841 Rosa chinensis HOM05D003823 ORTHO05D004866 1.9e-104 382.5 188 95.7
Psat5g111480 Pisum sativum HOM05D003823 ORTHO05D004866 3.2e-104 381.7 185 97.3
Sc12g0006240 Simmondsia chinensis HOM05D003823 ORTHO05D004866 3.2e-104 381.7 188 95.2
Potri.001G354000 Populus trichocarpa HOM05D003823 ORTHO05D004866 4.2e-104 381.3 188 95.2
Sed0017565 Sechium edule HOM05D003823 ORTHO05D004866 7.2e-104 380.6 188 95.2
Manes.14G076100 Manihot esculenta HOM05D003823 ORTHO05D004866 9.3e-104 380.2 188 95.2
Hund02662 Selenicereus undatus HOM05D003823 ORTHO05D004866 9.3e-104 380.2 188 93.6
Glyma.02G268600 Glycine max HOM05D003823 ORTHO05D004866 1.2e-103 379.8 186 95.7
VMungo0647G1166 Vigna mungo HOM05D003823 ORTHO05D004866 1.6e-103 379.4 186 95.2
Phvul.008G213700 Phaseolus vulgaris HOM05D003823 ORTHO05D004866 2.1e-103 379.0 186 94.6
TWI60G1055 Tripterygium wilfordii HOM05D003823 ORTHO05D004866 2.7e-103 378.6 188 94.7
TWI81G0804 Tripterygium wilfordii HOM05D003823 ORTHO05D004866 2.7e-103 378.6 188 94.7
AUR62027457 Chenopodium quinoa HOM05D003823 ORTHO05D004866 3.6e-103 378.3 184 96.7
AUR62031242 Chenopodium quinoa HOM05D003823 ORTHO05D004866 3.6e-103 378.3 184 96.7
Ca_16285_v3 Cicer arietinum L. HOM05D003823 ORTHO05D004866 3.6e-103 378.3 186 95.7
Cc04_g17180 Coffea canephora HOM05D003823 ORTHO05D004866 3.6e-103 378.3 188 94.1
FvH4_5g15250 Fragaria vesca HOM05D003823 ORTHO05D004866 4.6e-103 377.9 188 95.7
FAN04G0558 Fragaria x ananassa HOM05D003823 ORTHO05D004866 4.6e-103 377.9 188 95.7
FAN08G0194 Fragaria x ananassa HOM05D003823 ORTHO05D004866 4.6e-103 377.9 188 95.7
FAN13G2005 Fragaria x ananassa HOM05D003823 ORTHO05D004866 4.6e-103 377.9 188 95.7
FAN18G4237 Fragaria x ananassa HOM05D003823 ORTHO05D004866 4.6e-103 377.9 188 95.7
PGR083G1126 Punica granatum HOM05D003823 ORTHO05D004866 4.6e-103 377.9 189 94.7
Prupe.5G189200 Prunus persica HOM05D003823 ORTHO05D004866 7.9e-103 377.1 186 95.7
Potri.011G077900 Populus trichocarpa HOM05D003823 ORTHO05D004866 1.0e-102 376.7 188 94.1
TPR.G25673 Trifolium pratense HOM05D003823 ORTHO05D004866 1.3e-102 376.3 186 94.6
Medtr3g080480 Medicago truncatula HOM05D003823 ORTHO05D004866 1.8e-102 375.9 187 95.2
Solyc03g113020.3 Solanum lycopersicum HOM05D003823 ORTHO05D004866 1.8e-102 375.9 187 95.7
Sopen03g032100 Solanum pennellii HOM05D003823 ORTHO05D004866 1.8e-102 375.9 187 95.7
Lalb_Chr25g0280071 Lupinus albus HOM05D003823 ORTHO05D004866 2.3e-102 375.6 185 95.7
Cpa.g.sc388.5 Carica papaya HOM05D003823 ORTHO05D004866 3.0e-102 375.2 186 95.2
Glyma.14G048800 Glycine max HOM05D003823 ORTHO05D004866 3.0e-102 375.2 186 94.6
PGSC0003DMG400018144 Solanum tuberosum HOM05D003823 ORTHO05D004866 3.0e-102 375.2 187 95.7
ATR0564G299 Amborella trichopoda HOM05D003823 ORTHO05D004866 3.9e-102 374.8 185 95.7
Psat2g025840 Pisum sativum HOM05D003823 ORTHO05D004866 3.9e-102 374.8 186 94.1
Sabra16G0232900 Salix brachista HOM05D003823 ORTHO05D004866 3.9e-102 374.8 188 93.1
Ca_06062_v3 Cicer arietinum L. HOM05D003823 ORTHO05D004866 5.1e-102 374.4 186 94.6
Ca_30714_v3 Cicer arietinum L. HOM05D003823 ORTHO05D004866 5.1e-102 374.4 186 94.6
TPR.G29042 Trifolium pratense HOM05D003823 ORTHO05D004866 6.7e-102 374.0 185 95.7
Dinv38684 Davidia involucrata HOM05D003823 ORTHO05D004866 8.7e-102 373.6 187 93.6
Medtr5g085380 Medicago truncatula HOM05D003823 ORTHO05D004866 8.7e-102 373.6 186 93.5
MBI02_g36598_MAGBIO Magnolia biondii HOM05D003823 ORTHO05D004866 1.1e-101 373.2 185 94.6
Peaxi162Scf00009g00217 Petunia axillaris HOM05D003823 ORTHO05D004866 1.1e-101 373.2 184 96.2
Zm00001eb203950 Zea mays HOM05D003823 ORTHO05D004866 1.1e-101 373.2 185 94.6
Gohir.A11G029891 Gossypium hirsutum HOM05D003823 ORTHO05D004866 1.5e-101 372.9 188 93.6
Nitab4.5_0000785g0070 Nicotiana tabacum HOM05D003823 ORTHO05D004866 1.5e-101 372.9 185 95.7
Nitab4.5_0010010g0030 Nicotiana tabacum HOM05D003823 ORTHO05D004866 1.5e-101 372.9 185 95.7
SalBow6G5762 Salvia bowleyana HOM05D003823 ORTHO05D004866 1.5e-101 372.9 185 94.6
CAN.G1305.7 Capsicum annuum HOM05D003823 ORTHO05D004866 1.9e-101 372.5 185 95.7
Lj4g0027914 Lotus japonicus HOM05D003823 ORTHO05D004866 1.9e-101 372.5 186 93.5
Os02g0265400 Oryza sativa ssp. japonica HOM05D003823 ORTHO05D004866 1.9e-101 372.5 185 95.1
MSTRG.9636 Avicennia marina HOM05D003823 ORTHO05D004866 3.3e-101 371.7 187 92.5
PSO017G2864 Papaver somniferum HOM05D003823 ORTHO05D004866 3.3e-101 371.7 185 94.6
Sed0002791 Sechium edule HOM05D003823 ORTHO05D004866 3.3e-101 371.7 188 92.0
Migut.D02333 Erythranthe guttata HOM05D003823 ORTHO05D004866 4.3e-101 371.3 184 94.6
Eucgr.K02462 Eucalyptus grandis HOM05D003823 ORTHO05D004866 4.3e-101 371.3 207 87.9
Nn8g40950 Nelumbo nucifera HOM05D003823 ORTHO05D004866 4.3e-101 371.3 187 94.1
Thecc.03G082400 Theobroma cacao HOM05D003823 ORTHO05D004866 4.3e-101 371.3 188 93.6
TAR374G1522 Trochodendron aralioides HOM05D003823 ORTHO05D004866 4.3e-101 371.3 185 94.1
vmacro18202 Vaccinium macrocarpon HOM05D003823 ORTHO05D004866 4.3e-101 371.3 189 92.6
Ciclev10022411m.g Citrus clementina HOM05D003823 ORTHO05D004866 7.4e-101 370.5 185 94.1
Dinv06526 Davidia involucrata HOM05D003823 ORTHO05D004866 7.4e-101 370.5 187 92.0
Gohir.D11G033300 Gossypium hirsutum HOM05D003823 ORTHO05D004866 7.4e-101 370.5 188 93.1
Gohir.D12G169500 Gossypium hirsutum HOM05D003823 ORTHO05D004866 7.4e-101 370.5 187 92.5
Gorai.007G036100 Gossypium raimondii HOM05D003823 ORTHO05D004866 7.4e-101 370.5 188 93.1
Lsat_1_v5_gn_2_88881 Lactuca sativa HOM05D003823 ORTHO05D004866 7.4e-101 370.5 187 92.5
Oeu022626.1 Olea europaea HOM05D003823 ORTHO05D004866 9.7e-101 370.2 187 92.5
PSO478G3470 Papaver somniferum HOM05D003823 ORTHO05D004866 9.7e-101 370.2 185 94.1
Actinidia37644 Actinidia chinensis HOM05D003823 ORTHO05D004866 1.3e-100 369.8 185 94.1
EL10Ac8g19266 Beta vulgaris HOM05D003823 ORTHO05D004866 1.3e-100 369.8 184 93.5
ECA238G0538 Erigeron canadensis HOM05D003823 ORTHO05D004866 1.3e-100 369.8 187 91.4
Aqoxy3G03322 Aquilegia oxysepala HOM05D003823 ORTHO05D004866 1.6e-100 369.4 187 92.5
HanXRQChr02g0056361 Helianthus annuus HOM05D003823 ORTHO05D004866 1.6e-100 369.4 187 92.0
HanXRQChr14g0449901 Helianthus annuus HOM05D003823 ORTHO05D004866 1.6e-100 369.4 187 91.4
Gohir.A12G166100 Gossypium hirsutum HOM05D003823 ORTHO05D004866 2.2e-100 369.0 186 92.5
Nn4g23085 Nelumbo nucifera HOM05D003823 ORTHO05D004866 2.2e-100 369.0 187 93.6
TAR622G1107 Trochodendron aralioides HOM05D003823 ORTHO05D004866 2.2e-100 369.0 185 93.5
Duzib268G0082 Durio zibethinus HOM05D003823 ORTHO05D004866 3.7e-100 368.2 187 91.4
Duzib084G0821 Durio zibethinus HOM05D003823 ORTHO05D004866 4.8e-100 367.9 187 93.0
GSVIVG01020043001 Vitis vinifera HOM05D003823 ORTHO05D004866 4.8e-100 367.9 187 92.0
Actinidia02709 Actinidia chinensis HOM05D003823 ORTHO05D004866 8.2e-100 367.1 189 91.5
BcaC01g01774 Brassica carinata HOM05D003823 ORTHO05D004866 8.2e-100 367.1 187 92.0
C03p72020 Brassica napus HOM05D003823 ORTHO05D004866 8.2e-100 367.1 187 92.0
BolC3t19499H Brassica oleracea HOM05D003823 ORTHO05D004866 8.2e-100 367.1 187 92.0
CSS0031728 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 8.2e-100 367.1 187 90.9
CSS0041610 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 8.2e-100 367.1 187 90.9
CSS0049183 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 8.2e-100 367.1 187 90.9
Cc07_g03190 Coffea canephora HOM05D003823 ORTHO05D004866 8.2e-100 367.1 187 92.5
Gorai.008G182100 Gossypium raimondii HOM05D003823 ORTHO05D004866 8.2e-100 367.1 187 91.4
THA.LOC104819434 Tarenaya hassleriana HOM05D003823 ORTHO05D004866 8.2e-100 367.1 187 92.5
Duzib251G0021 Durio zibethinus HOM05D003823 ORTHO05D004866 1.1e-99 366.7 185 92.4
BcaB01g00874 Brassica carinata HOM05D003823 ORTHO05D004866 1.4e-99 366.3 187 92.0
Rhsim08G0157700 Rhododendron simsii HOM05D003823 ORTHO05D004866 1.8e-99 365.9 189 91.0
Migut.D02334 Erythranthe guttata HOM05D003823 ORTHO05D004866 2.4e-99 365.5 186 93.0
Thecc.02G351700 Theobroma cacao HOM05D003823 ORTHO05D004866 4.1e-99 364.8 185 90.8
Sp5g14150 Schrenkiella parvula HOM05D003823 ORTHO05D004866 5.3e-99 364.4 187 91.4
Zm00001eb237810 Zea mays HOM05D003823 ORTHO05D004866 5.3e-99 364.4 185 92.4
A06p19840 Brassica napus HOM05D003823 ORTHO05D004866 6.9e-99 364.0 187 91.4
BraA06t25064Z Brassica rapa HOM05D003823 ORTHO05D004866 6.9e-99 364.0 187 91.4
Manes.05G098825 Manihot esculenta HOM05D003823 ORTHO05D004866 6.9e-99 364.0 185 91.9
COL.COLO4_22965 Corchorus olitorius HOM05D003823 ORTHO05D004866 9.1e-99 363.6 185 90.8
DCAR_026066 Daucus carota HOM05D003823 ORTHO05D004866 9.1e-99 363.6 185 92.4
A06p27290 Brassica napus HOM05D003823 ORTHO05D004866 1.2e-98 363.2 187 90.9
BraA06t25670Z Brassica rapa HOM05D003823 ORTHO05D004866 1.2e-98 363.2 187 90.9
Thhalv10010746m.g Eutrema salsugineum HOM05D003823 ORTHO05D004866 1.5e-98 362.8 187 90.9
THA.LOC104821437 Tarenaya hassleriana HOM05D003823 ORTHO05D004866 1.5e-98 362.8 187 90.9
CARHR156490 Cardamine hirsuta HOM05D003823 ORTHO05D004866 2.0e-98 362.5 187 90.4
Rhsim08G0068000 Rhododendron simsii HOM05D003823 ORTHO05D004866 2.0e-98 362.5 201 87.1
Atru.chr11.1839 Acer truncatum HOM05D003823 ORTHO05D004866 2.6e-98 362.1 185 92.4
Aa31LG4G16460 Aethionema arabicum HOM05D003823 ORTHO05D004866 2.6e-98 362.1 187 89.8
CDE02G3183 Ceratophyllum demersum HOM05D003823 ORTHO05D004866 2.6e-98 362.1 183 90.7
Dinv19933 Davidia involucrata HOM05D003823 ORTHO05D004866 2.6e-98 362.1 187 91.4
Ciclev10032832m.g Citrus clementina HOM05D003823 ORTHO05D004866 3.4e-98 361.7 185 91.4
BcaC01g02292 Brassica carinata HOM05D003823 ORTHO05D004866 4.5e-98 361.3 187 90.9
C03p66970 Brassica napus HOM05D003823 ORTHO05D004866 4.5e-98 361.3 187 90.9
BolC3t18970H Brassica oleracea HOM05D003823 ORTHO05D004866 4.5e-98 361.3 187 90.9
HPP92_020326 Vanilla planifolia HOM05D003823 ORTHO05D004866 5.9e-98 360.9 193 88.6
BcaB02g10689 Brassica carinata HOM05D003823 ORTHO05D004866 6.5e-97 357.5 187 89.8
Oeu006179.1 Olea europaea HOM05D003823 ORTHO05D004866 6.5e-97 357.5 187 90.9
Atru.chr4.927 Acer truncatum HOM05D003823 ORTHO05D004866 1.9e-96 355.9 185 90.3
AT3G47810 Arabidopsis thaliana HOM05D003823 ORTHO05D004866 4.2e-96 354.8 187 89.3
Haze_07352 Corylus avellana HOM05D003823 ORTHO05D004866 5.5e-96 354.4 254 71.7
AL5G27100 Arabidopsis lyrata HOM05D003823 ORTHO05D004866 9.4e-96 353.6 187 88.8
Lj5A113G71 Lonicera japonica HOM05D003823 ORTHO05D004866 9.4e-96 353.6 188 87.2
Mapoly0081s0078 Marchantia polymorpha HOM05D003823 ORTHO05D004866 1.6e-95 352.8 182 87.9
Carub.0005s1392 Capsella rubella HOM05D003823 ORTHO05D004866 3.0e-94 348.6 181 90.6
SMO116G0153 Selaginella moellendorffii HOM05D003823 ORTHO05D004866 3.0e-94 348.6 187 85.6
Pp3c11_12990 Physcomitrium patens HOM05D003823 ORTHO05D004866 1.5e-93 346.3 182 88.5
CSS0031561 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 5.9e-90 334.3 183 88.5
SGA_v2.0_scaffold193G40709 Striga asiatica HOM05D003823 ORTHO05D004866 5.9e-90 334.3 191 82.7
CBR_g29439 Chara braunii HOM05D003823 ORTHO05D004866 5.5e-88 327.8 187 78.6
Pp3c7_13070 Physcomitrium patens HOM05D003823 ORTHO05D004866 9.4e-88 327.0 182 84.6
GSVIVG01008037001 Vitis vinifera HOM05D003823 ORTHO05D004866 2.7e-87 325.5 162 93.8
CSS0019545 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 5.9e-82 307.8 187 79.1
QL93p0043_0002 Quercus lobata HOM05D003823 ORTHO05D004866 1.1e-80 303.5 144 100.0
CDE09G0968 Ceratophyllum demersum HOM05D005655 ORTHO05D007386 5.5e-80 301.2 152 90.1
MBI05_g00394_MAGBIO Magnolia biondii HOM05D000046 ORTHO05D000195 7.0e-75 284.3 142 91.5
Nitab4.5_0012727g0030 Nicotiana tabacum HOM05D003823 ORTHO05D004866 1.2e-74 283.5 141 94.3
SEGI_34945 Sequoiadendron giganteum HOM05D003823 ORTHO05D004866 1.7e-73 279.6 140 92.1
Actinidia17538 Actinidia chinensis HOM05D003823 ORTHO05D004866 5.7e-69 264.6 130 92.3
Eucgr.G00164 Eucalyptus grandis HOM05D003823 ORTHO05D004866 6.3e-68 261.2 136 90.4
Eucgr.G00114 Eucalyptus grandis HOM05D003823 ORTHO05D004866 1.2e-66 256.9 149 84.6
Lj4A511G17 Lonicera japonica HOM05D003823 ORTHO05D004866 5.9e-66 254.6 187 70.6
TAR729G0007 Trochodendron aralioides HOM05D003823 ORTHO05D004866 5.9e-66 254.6 163 78.5
Manes.01G188500 Manihot esculenta HOM05D003823 ORTHO05D004866 1.7e-65 253.1 128 89.1
CSS0004961 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 5.0e-65 251.5 188 68.1
MCO13G641 Micromonas commoda HOM05D003823 ORTHO05D004866 4.5e-58 228.4 188 53.7
Cre12.g499900 Chlamydomonas reinhardtii HOM05D003823 ORTHO05D004866 7.8e-58 227.6 187 56.1
Lj4A501G12 Lonicera japonica HOM05D003823 ORTHO05D004866 2.0e-53 213.0 166 66.3
Atru.chr9.2289 Acer truncatum HOM05D003823 ORTHO05D004866 3.9e-49 198.7 157 66.9
Gorai.007G237600 Gossypium raimondii HOM05D003823 ORTHO05D004866 9.8e-45 184.1 90 92.2
Gohir.D02G085100 Gossypium hirsutum HOM05D003823 ORTHO05D004866 1.1e-43 180.6 115 74.8
CSS0033378 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 4.6e-42 175.3 90 86.7
Gohir.D06G139701 Gossypium hirsutum HOM05D003823 ORTHO05D017994 1.7e-41 173.3 87 89.7
Gohir.A08G078101 Gossypium hirsutum HOM05D003823 ORTHO05D004866 2.3e-41 172.9 103 78.6
Gorai.005G191600 Gossypium raimondii HOM05D003823 ORTHO05D004866 6.6e-41 171.4 87 88.5
Gorai.003G098000 Gossypium raimondii HOM05D003823 ORTHO05D017994 1.1e-40 170.6 87 88.5
Gorai.008G100600 Gossypium raimondii HOM05D003823 ORTHO05D004866 4.3e-40 168.7 87 88.5
Gohir.A05G198301 Gossypium hirsutum HOM05D003823 ORTHO05D004866 7.3e-40 167.9 87 87.4
Gohir.D03G122233 Gossypium hirsutum HOM05D003823 ORTHO05D004866 7.3e-40 167.9 87 87.4
CSS0038842 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 8.9e-38 161.0 157 55.4
Gohir.D06G082500 Gossypium hirsutum HOM05D003823 ORTHO05D017994 1.7e-36 156.8 87 85.1
Lj4g0026130 Lotus japonicus HOM05D003823 ORTHO05D004866 4.9e-36 155.2 96 81.2
Thecc.02G319100 Theobroma cacao HOM05D003823 ORTHO05D004866 1.6e-34 150.2 97 78.4
Gorai.013G138400 Gossypium raimondii HOM05D003823 ORTHO05D004866 1.0e-33 147.5 79 84.8
unitig_0.g782 Utricularia gibba HOM05D003823 ORTHO05D004866 1.1e-32 144.1 69 89.9
Sabra15G0049800 Salix brachista HOM05D003823 ORTHO05D000412 3.3e-32 142.5 70 98.6
Gohir.A01G072501 Gossypium hirsutum HOM05D003823 ORTHO05D017994 7.1e-27 124.8 62 88.7
Gohir.A05G203200 Gossypium hirsutum HOM05D003823 ORTHO05D017994 7.1e-27 124.8 62 88.7
Gohir.A10G203700 Gossypium hirsutum HOM05D003823 ORTHO05D017994 7.1e-27 124.8 62 88.7
Gohir.A12G000600 Gossypium hirsutum HOM05D003823 ORTHO05D017994 7.1e-27 124.8 62 88.7
Gohir.D06G205050 Gossypium hirsutum HOM05D003823 ORTHO05D017994 7.1e-27 124.8 62 88.7
Gohir.D08G111400 Gossypium hirsutum HOM05D003823 ORTHO05D017994 7.1e-27 124.8 62 88.7
Sabra15G0057900 Salix brachista HOM05D003823 ORTHO05D349330 2.5e-16 89.7 47 91.5
Gorai.005G095900 Gossypium raimondii HOM05D003823 ORTHO05D218813 1.1e-14 84.3 44 88.6
Duzib248G1489 Durio zibethinus HOM05D003823 ORTHO05D186086 5.8e-13 78.6 55 69.1


User provided reference genes

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