Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p047707 Quercus lobata HOM05D006330 ORTHO05D008013 1.6e-169 599.4 309 100.0
CiPaw.13G055600 Carya illinoinensis HOM05D006330 ORTHO05D008013 4.6e-148 528.1 309 87.7
Cfa010572 Carpinus fangiana HOM05D006330 ORTHO05D008013 1.7e-147 526.2 309 87.4
Haze_03505 Corylus avellana HOM05D006330 ORTHO05D008013 3.9e-147 525.0 309 87.4
Manes.12G055500 Manihot esculenta HOM05D006330 ORTHO05D008013 3.1e-136 488.8 309 82.5
TAR362G0826 Trochodendron aralioides HOM05D006330 ORTHO05D008013 1.2e-132 476.9 309 79.6
CANSAT01G2136 Cannabis sativa HOM05D006330 ORTHO05D008013 2.1e-132 476.1 310 80.3
Duzib133G1456 Durio zibethinus HOM05D006330 ORTHO05D008013 1.0e-131 473.8 307 81.8
Nn7g37444 Nelumbo nucifera HOM05D006330 ORTHO05D008013 3.3e-130 468.8 309 79.6
Atru.chr6.3528 Acer truncatum HOM05D006330 ORTHO05D008013 5.6e-130 468.0 308 79.2
FAN15G1514 Fragaria x ananassa HOM05D006330 ORTHO05D008013 3.6e-129 465.3 309 77.0
RcHm_v2.0_Chr6g0282221 Rosa chinensis HOM05D006330 ORTHO05D008013 4.7e-129 464.9 308 77.6
Thecc.01G207700 Theobroma cacao HOM05D006330 ORTHO05D008013 6.2e-129 464.5 265 89.4
Potri.014G175500 Populus trichocarpa HOM05D006330 ORTHO05D008013 1.4e-128 463.4 317 79.5
FvH4_2g17480 Fragaria vesca HOM05D006330 ORTHO05D008013 3.1e-128 462.2 309 76.4
Gorai.007G161200 Gossypium raimondii HOM05D006330 ORTHO05D008013 3.1e-128 462.2 309 80.6
Gohir.D11G150300 Gossypium hirsutum HOM05D006330 ORTHO05D008013 5.2e-128 461.5 309 80.3
Gohir.A11G143900 Gossypium hirsutum HOM05D006330 ORTHO05D008013 1.2e-127 460.3 309 80.3
GSVIVG01001532001 Vitis vinifera HOM05D006330 ORTHO05D008013 1.5e-127 459.9 305 79.3
FAN24G2605 Fragaria x ananassa HOM05D006330 ORTHO05D008013 7.6e-127 457.6 309 76.4
Phvul.010G036400 Phaseolus vulgaris HOM05D006330 ORTHO05D008013 1.9e-125 453.0 304 78.0
Glyma.07G124200 Glycine max HOM05D006330 ORTHO05D008013 7.1e-125 451.1 306 78.1
TWI36G1481 Tripterygium wilfordii HOM05D006330 ORTHO05D008013 1.2e-124 450.3 304 78.3
arahy.Tifrunner.gnm1.ann1.3RIK1P Arachis hypogaea HOM05D006330 ORTHO05D008013 1.6e-124 449.9 308 76.6
Glyma.03G097100 Glycine max HOM05D006330 ORTHO05D008013 2.7e-124 449.1 306 78.1
MD10G1148200 Malus domestica HOM05D006330 ORTHO05D008013 6.0e-124 448.0 311 76.2
Psat4g208240 Pisum sativum HOM05D006330 ORTHO05D008013 6.0e-124 448.0 292 79.5
Ciclev10015989m.g Citrus clementina HOM05D006330 ORTHO05D008013 7.8e-124 447.6 312 77.6
arahy.Tifrunner.gnm1.ann1.84ZR2Z Arachis hypogaea HOM05D006330 ORTHO05D008013 1.0e-123 447.2 310 75.5
Actinidia23802 Actinidia chinensis HOM05D006330 ORTHO05D008013 1.3e-123 446.8 310 74.5
Cc01_g15880 Coffea canephora HOM05D006330 ORTHO05D008013 1.3e-123 446.8 305 76.7
Prupe.8G187200 Prunus persica HOM05D006330 ORTHO05D008013 3.9e-123 445.3 309 77.0
Actinidia34530 Actinidia chinensis HOM05D006330 ORTHO05D008013 8.7e-123 444.1 310 74.5
Lalb_Chr12g0210221 Lupinus albus HOM05D006330 ORTHO05D008013 8.7e-123 444.1 304 77.3
Eucgr.K02361 Eucalyptus grandis HOM05D006330 ORTHO05D008013 3.3e-122 442.2 293 78.2
TPR.G17377 Trifolium pratense HOM05D006330 ORTHO05D008013 4.3e-122 441.8 298 76.8
MBI10_g35385_MAGBIO Magnolia biondii HOM05D006330 ORTHO05D008013 1.3e-121 440.3 302 76.5
Lj2C1112G6 Lonicera japonica HOM05D006330 ORTHO05D008013 1.6e-121 439.9 267 83.1
Lsat_1_v5_gn_9_16880 Lactuca sativa HOM05D006330 ORTHO05D008013 4.8e-121 438.3 304 75.0
Sc05g0001630 Simmondsia chinensis HOM05D006330 ORTHO05D008013 6.2e-121 438.0 284 77.1
THA.LOC104804704 Tarenaya hassleriana HOM05D006330 ORTHO05D008013 8.1e-121 437.6 286 79.0
PGR044G2230 Punica granatum HOM05D006330 ORTHO05D008013 1.1e-120 437.2 268 82.8
PSO675G8704 Papaver somniferum HOM05D006330 ORTHO05D008013 1.8e-120 436.4 304 75.7
VMungo0331G1131 Vigna mungo HOM05D006330 ORTHO05D008013 1.2e-119 433.7 264 83.0
Aqoxy2G02383 Aquilegia oxysepala HOM05D006330 ORTHO05D008013 2.0e-119 433.0 266 83.5
Ca_23158_v3 Cicer arietinum L. HOM05D006330 ORTHO05D008013 2.6e-119 432.6 293 77.8
Medtr8g010130 Medicago truncatula HOM05D006330 ORTHO05D008013 3.4e-119 432.2 293 76.5
MSTRG.21296 Avicennia marina HOM05D006330 ORTHO05D008013 3.8e-118 428.7 305 73.4
CsaV3_7G026730 Cucumis sativus L. HOM05D006330 ORTHO05D008013 3.8e-118 428.7 270 80.7
MELO3C021126.2 Cucumis melo HOM05D006330 ORTHO05D008013 4.9e-118 428.3 270 80.4
ClCG09G008360 Citrullus lanatus HOM05D006330 ORTHO05D008013 4.2e-117 425.2 264 80.7
ATR0743G141 Amborella trichopoda HOM05D006330 ORTHO05D008013 7.1e-117 424.5 312 71.8
CDE02G1604 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 9.3e-117 424.1 291 76.3
EL10Ac5g10587 Beta vulgaris HOM05D006330 ORTHO05D008013 1.2e-116 423.7 308 72.4
HPP92_007591 Vanilla planifolia HOM05D006330 ORTHO05D008013 1.6e-116 423.3 258 80.2
DCAR_004774 Daucus carota HOM05D006330 ORTHO05D008013 2.1e-116 422.9 329 68.7
HanXRQChr07g0190561 Helianthus annuus HOM05D006330 ORTHO05D008013 1.7e-115 419.9 271 78.2
Sopen09g015980 Solanum pennellii HOM05D006330 ORTHO05D008013 1.7e-115 419.9 300 75.0
ECA247G1307 Erigeron canadensis HOM05D006330 ORTHO05D008013 5.1e-115 418.3 309 71.2
Sed0009827 Sechium edule HOM05D006330 ORTHO05D008013 5.1e-115 418.3 266 80.1
SalBow3G0290 Salvia bowleyana HOM05D006330 ORTHO05D008013 5.6e-114 414.8 281 75.1
SGA_v2.0_scaffold231G43447 Striga asiatica HOM05D006330 ORTHO05D008013 2.8e-113 412.5 309 70.2
Rhsim01G0247700 Rhododendron simsii HOM05D006330 ORTHO05D008013 8.1e-113 411.0 350 65.7
Sabra14G0134300 Salix brachista HOM05D006330 ORTHO05D008013 9.0e-112 407.5 323 72.8
AUR62008069 Chenopodium quinoa HOM05D006330 ORTHO05D008013 4.5e-111 405.2 242 85.1
Zm00001eb168340 Zea mays HOM05D006330 ORTHO05D008013 4.9e-110 401.7 257 77.0
Migut.D00775 Erythranthe guttata HOM05D006330 ORTHO05D008013 8.4e-110 401.0 294 70.7
Os11g0247400 Oryza sativa ssp. japonica HOM05D006330 ORTHO05D008013 3.2e-109 399.1 273 73.6
Hma1.2p1_0161F.1_g071650 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 5.4e-109 398.3 241 83.4
vmacro14689 Vaccinium macrocarpon HOM05D006330 ORTHO05D008013 1.6e-108 396.7 260 77.3
Aa31sc18G40 Aethionema arabicum HOM05D006330 ORTHO05D008013 2.3e-107 392.9 285 72.6
Sp3g22990 Schrenkiella parvula HOM05D006330 ORTHO05D008013 1.3e-105 387.1 302 68.9
C03p54570 Brassica napus HOM05D006330 ORTHO05D008013 2.8e-105 386.0 308 68.2
BolC3t17744H Brassica oleracea HOM05D006330 ORTHO05D008013 2.8e-105 386.0 308 68.2
Carub.0003s2579 Capsella rubella HOM05D006330 ORTHO05D008013 2.8e-105 386.0 279 72.8
AL3G41590 Arabidopsis lyrata HOM05D006330 ORTHO05D008013 4.8e-105 385.2 280 72.1
CARHR101770 Cardamine hirsuta HOM05D006330 ORTHO05D008013 4.8e-105 385.2 282 71.6
Hund09482 Selenicereus undatus HOM05D006330 ORTHO05D008013 4.8e-105 385.2 306 70.3
A03p44190 Brassica napus HOM05D006330 ORTHO05D008013 6.2e-105 384.8 302 68.9
BraA03t13548Z Brassica rapa HOM05D006330 ORTHO05D008013 6.2e-105 384.8 302 68.9
Ciclev10018050m.g Citrus clementina HOM05D006330 ORTHO05D008013 2.4e-104 382.9 236 83.5
Thhalv10002617m.g Eutrema salsugineum HOM05D006330 ORTHO05D008013 1.2e-103 380.6 280 71.4
BcaB08g34453 Brassica carinata HOM05D006330 ORTHO05D008013 1.5e-103 380.2 302 67.9
COL.COLO4_34269 Corchorus olitorius HOM05D006330 ORTHO05D008013 3.4e-103 379.0 218 89.0
BcaC06g35817 Brassica carinata HOM05D006330 ORTHO05D008013 7.6e-103 377.9 299 68.6
AT3G25470 Arabidopsis thaliana HOM05D006330 ORTHO05D008013 1.0e-102 377.5 280 70.4
A07p06930 Brassica napus HOM05D006330 ORTHO05D008013 4.9e-102 375.2 299 67.6
BraA07t28484Z Brassica rapa HOM05D006330 ORTHO05D008013 4.9e-102 375.2 299 67.6
Lj3g0006219 Lotus japonicus HOM05D006330 ORTHO05D008013 1.1e-101 374.0 267 76.4
BolC7t41520H Brassica oleracea HOM05D006330 ORTHO05D008013 1.9e-101 373.2 300 68.3
C07p10530 Brassica napus HOM05D006330 ORTHO05D008013 3.2e-101 372.5 300 68.3
Dinv28793 Davidia involucrata HOM05D006330 ORTHO05D008013 2.5e-98 362.8 258 77.9
Nitab4.5_0000038g0340 Nicotiana tabacum HOM05D006330 ORTHO05D008013 1.4e-96 357.1 253 75.9
Nitab4.5_0010469g0010 Nicotiana tabacum HOM05D006330 ORTHO05D008013 1.4e-96 357.1 255 76.9
Mapoly0006s0124 Marchantia polymorpha HOM05D006330 ORTHO05D008013 2.4e-96 356.3 246 70.7
Peaxi162Scf00841g00112 Petunia axillaris HOM05D006330 ORTHO05D008013 2.4e-96 356.3 335 62.4
AUR62028646 Chenopodium quinoa HOM05D006330 ORTHO05D008013 5.8e-95 351.7 216 83.8
BcaC01g03225 Brassica carinata HOM05D006330 ORTHO05D008013 3.8e-94 349.0 308 64.0
Oeu049580.1 Olea europaea HOM05D006330 ORTHO05D008013 6.5e-94 348.2 227 77.1
Pp3c24_1560 Physcomitrium patens HOM05D006330 ORTHO05D008013 1.3e-91 340.5 274 62.4
CSS0004044 Camellia sinensis var. sinensis HOM05D006330 ORTHO05D008013 3.3e-90 335.9 246 73.2
Solyc09g047870.4 Solanum lycopersicum HOM05D006330 ORTHO05D008013 5.7e-90 335.1 237 76.4
CBR_g60689 Chara braunii HOM05D006330 ORTHO05D008013 1.3e-86 323.9 249 66.7
Cpa.g.sc8.41 Carica papaya HOM05D006330 ORTHO05D008013 2.3e-83 313.2 218 75.2
BcaB06g26747 Brassica carinata HOM05D006330 ORTHO05D008013 1.5e-82 310.5 303 58.4
SMO141G0006 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 1.5e-82 310.5 252 62.7
SMO186G0001 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 3.1e-80 302.8 243 62.6
FAN27G2337 Fragaria x ananassa HOM05D006330 ORTHO05D008013 2.6e-79 299.7 309 57.3
PSO732G0743 Papaver somniferum HOM05D006330 ORTHO05D008013 4.5e-79 298.9 179 83.8
HanXRQChr07g0198371 Helianthus annuus HOM05D006330 ORTHO05D008013 1.7e-73 280.4 195 75.9
MCO07G099 Micromonas commoda HOM05D006330 ORTHO05D008013 5.5e-69 265.4 243 57.6
Cre10.g428900 Chlamydomonas reinhardtii HOM05D006330 ORTHO05D008013 1.1e-66 257.7 247 59.1
CAN.G253.5 Capsicum annuum HOM05D006330 ORTHO05D008013 3.1e-56 223.0 130 87.7
PRCOL_00000451 Prasinoderma coloniale HOM05D006330 ORTHO05D008013 1.2e-52 211.1 294 44.6
SEGI_37995 Sequoiadendron giganteum HOM05D006330 ORTHO05D008013 1.5e-45 187.6 119 74.8
arahy.Tifrunner.gnm1.ann1.VBTZ6V Arachis hypogaea HOM05D006330 ORTHO05D008013 1.1e-40 171.4 112 75.0
AagrBONN_evm.TU.Sc2ySwM_368.2380 Anthoceros agrestis HOM05D006330 ORTHO05D008013 4.6e-39 166.0 116 69.0
PSO675G8411 Papaver somniferum HOM05D006330 ORTHO05D008013 1.0e-35 154.8 95 78.9
Hma1.2p1_0161F.1_g071660 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 8.3e-33 145.2 89 79.8
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 1.3e-30 137.9 78 87.2
CDE04G0367 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 2.9e-25 120.2 85 67.1
QL09p047872 Quercus lobata HOM05D006330 ORTHO05D008013 4.1e-24 116.3 64 92.2
VMungo1383G2211 Vigna mungo HOM05D006330 ORTHO05D434633 5.2e-11 72.8 44 75.0
BcaB06g26875 Brassica carinata HOM05D006330 ORTHO05D008013 2.6e-10 70.5 64 60.9
RcHm_v2.0_Chr5g0065021 Rosa chinensis HOM05D006330 ORTHO05D008013 9.9e-10 68.6 46 71.7
Nn7g37440 Nelumbo nucifera HOM05D006330 ORTHO05D008013 3.8e-09 66.6 36 86.1


User provided reference genes

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