Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p046766 Quercus lobata HOM05D004566 ORTHO05D006041 9.7e-158 560.1 277 100.0
QL09p046738 Quercus lobata HOM05D004566 ORTHO05D006041 5.7e-49 198.7 118 88.1
Carub.0002s2403 Capsella rubella HOM05D004566 ORTHO05D006041 6.3e-48 195.3 120 85.0
Aa31LG11G11410 Aethionema arabicum HOM05D004566 ORTHO05D006041 1.1e-47 194.5 120 85.0
QL02p025237 Quercus lobata HOM05D004566 ORTHO05D006041 1.4e-47 194.1 118 85.6
CiPaw.15G021200 Carya illinoinensis HOM05D004566 ORTHO05D006041 1.8e-47 193.7 118 85.6
Thecc.08G145200 Theobroma cacao HOM05D004566 ORTHO05D006041 1.8e-47 193.7 118 85.6
AL2G37320 Arabidopsis lyrata HOM05D004566 ORTHO05D006041 2.4e-47 193.4 120 84.2
AT1G77140 Arabidopsis thaliana HOM05D004566 ORTHO05D006041 2.4e-47 193.4 120 84.2
Thhalv10018344m.g Eutrema salsugineum HOM05D004566 ORTHO05D006041 2.4e-47 193.4 120 84.2
Sp5g32320 Schrenkiella parvula HOM05D004566 ORTHO05D006041 2.4e-47 193.4 120 84.2
THA.LOC104810036 Tarenaya hassleriana HOM05D004566 ORTHO05D006041 2.4e-47 193.4 120 83.3
Ah.04g149960 Amaranthus hybridus HOM05D004566 ORTHO05D006041 3.1e-47 193.0 118 85.6
PGR042G0484 Punica granatum HOM05D004566 ORTHO05D006041 3.1e-47 193.0 118 85.6
C06p31440 Brassica napus HOM05D004566 ORTHO05D006041 4.1e-47 192.6 120 83.3
CSS0027392 Camellia sinensis var. sinensis HOM05D004566 ORTHO05D006041 4.1e-47 192.6 118 84.7
COL.COLO4_38311 Corchorus olitorius HOM05D004566 ORTHO05D006041 4.1e-47 192.6 118 85.6
Duzib041G0052 Durio zibethinus HOM05D004566 ORTHO05D006041 4.1e-47 192.6 118 84.7
CARHR070630 Cardamine hirsuta HOM05D004566 ORTHO05D006041 5.3e-47 192.2 120 83.3
Atru.chr13.1721 Acer truncatum HOM05D004566 ORTHO05D006041 6.9e-47 191.8 118 83.9
Gohir.A02G108700 Gossypium hirsutum HOM05D004566 ORTHO05D006041 6.9e-47 191.8 118 84.7
Gohir.D03G061100 Gossypium hirsutum HOM05D004566 ORTHO05D006041 6.9e-47 191.8 118 84.7
Gorai.013G105000 Gossypium raimondii HOM05D004566 ORTHO05D006041 6.9e-47 191.8 118 84.7
AUR62018460 Chenopodium quinoa HOM05D004566 ORTHO05D006041 9.1e-47 191.4 118 84.7
AUR62020958 Chenopodium quinoa HOM05D004566 ORTHO05D006041 9.1e-47 191.4 118 84.7
Eucgr.F02736 Eucalyptus grandis HOM05D004566 ORTHO05D006041 9.1e-47 191.4 118 84.7
Glyma.04G240400 Glycine max HOM05D004566 ORTHO05D006041 9.1e-47 191.4 118 83.9
Glyma.06G123000 Glycine max HOM05D004566 ORTHO05D006041 9.1e-47 191.4 118 83.9
Lj4A692G26 Lonicera japonica HOM05D004566 ORTHO05D006041 9.1e-47 191.4 118 83.9
MD05G1016500 Malus domestica HOM05D004566 ORTHO05D006041 9.1e-47 191.4 118 83.9
CiPaw.16G017400 Carya illinoinensis HOM05D004566 ORTHO05D006041 1.2e-46 191.0 118 84.7
ECA232G5048 Erigeron canadensis HOM05D004566 ORTHO05D006041 1.2e-46 191.0 118 83.9
CAN.G744.14 Capsicum annuum HOM05D004566 ORTHO05D006041 1.5e-46 190.7 118 83.1
Ca_16654_v3 Cicer arietinum L. HOM05D004566 ORTHO05D006041 1.5e-46 190.7 118 83.9
Lj1g0025718 Lotus japonicus HOM05D004566 ORTHO05D006041 1.5e-46 190.7 118 83.1
Medtr3g090170 Medicago truncatula HOM05D004566 ORTHO05D006041 1.5e-46 190.7 118 83.9
Potri.005G188000 Populus trichocarpa HOM05D004566 ORTHO05D006041 1.5e-46 190.7 118 84.7
C02p34300 Brassica napus HOM05D004566 ORTHO05D006041 2.0e-46 190.3 120 83.3
Ciclev10000721m.g Citrus clementina HOM05D004566 ORTHO05D006041 2.0e-46 190.3 118 83.1
FvH4_2g14590 Fragaria vesca HOM05D004566 ORTHO05D006041 2.0e-46 190.3 118 83.1
FAN15G1625 Fragaria x ananassa HOM05D004566 ORTHO05D006041 2.0e-46 190.3 118 83.1
FAN24G3481 Fragaria x ananassa HOM05D004566 ORTHO05D006041 2.0e-46 190.3 118 83.1
FAN27G2999 Fragaria x ananassa HOM05D004566 ORTHO05D006041 2.0e-46 190.3 118 83.1
BcaB02g07097 Brassica carinata HOM05D004566 ORTHO05D006041 2.6e-46 189.9 120 81.7
BcaB05g25023 Brassica carinata HOM05D004566 ORTHO05D006041 2.6e-46 189.9 121 82.6
Duzib093G0819 Durio zibethinus HOM05D004566 ORTHO05D006041 2.6e-46 189.9 118 83.9
HanXRQChr09g0275251 Helianthus annuus HOM05D004566 ORTHO05D006041 2.6e-46 189.9 118 82.2
Hma1.2p1_0107F.1_g051470 Hydrangea macrophylla HOM05D004566 ORTHO05D006041 2.6e-46 189.9 118 83.9
Lsat_1_v5_gn_9_77820 Lactuca sativa HOM05D004566 ORTHO05D006041 2.6e-46 189.9 118 82.2
TAR381G1517 Trochodendron aralioides HOM05D004566 ORTHO05D006041 2.6e-46 189.9 118 83.1
Lalb_Chr23g0271371 Lupinus albus HOM05D004566 ORTHO05D006041 3.4e-46 189.5 118 82.2
Nitab4.5_0000299g0160 Nicotiana tabacum HOM05D004566 ORTHO05D006041 3.4e-46 189.5 118 82.2
Nitab4.5_0010241g0020 Nicotiana tabacum HOM05D004566 ORTHO05D006041 3.4e-46 189.5 118 82.2
GSVIVG01010038001 Vitis vinifera HOM05D004566 ORTHO05D006041 3.4e-46 189.5 118 83.1
ClCG08G006480 Citrullus lanatus HOM05D004566 ORTHO05D006041 4.5e-46 189.1 118 84.7
Haze_17715 Corylus avellana HOM05D004566 ORTHO05D006041 4.5e-46 189.1 118 82.2
MELO3C008406.2 Cucumis melo HOM05D004566 ORTHO05D006041 4.5e-46 189.1 118 84.7
DCAR_023123 Daucus carota HOM05D004566 ORTHO05D006041 4.5e-46 189.1 118 83.1
Lalb_Chr11g0066451 Lupinus albus HOM05D004566 ORTHO05D006041 4.5e-46 189.1 118 82.2
Solyc04g064820.3 Solanum lycopersicum HOM05D004566 ORTHO05D006041 4.5e-46 189.1 118 81.4
Sopen04g026780 Solanum pennellii HOM05D004566 ORTHO05D006041 4.5e-46 189.1 118 81.4
TWI60G0810 Tripterygium wilfordii HOM05D004566 ORTHO05D006041 4.5e-46 189.1 118 83.1
A02p21150 Brassica napus HOM05D004566 ORTHO05D006041 5.9e-46 188.7 120 82.5
FAN20G3136 Fragaria x ananassa HOM05D004566 ORTHO05D006041 5.9e-46 188.7 118 82.2
Phvul.009G135100 Phaseolus vulgaris HOM05D004566 ORTHO05D006041 5.9e-46 188.7 118 83.1
C06p31110 Brassica napus HOM05D004566 ORTHO05D006041 1.0e-45 188.0 120 80.8
Cfa018360 Carpinus fangiana HOM05D004566 ORTHO05D006041 1.0e-45 188.0 118 82.2
CsaV3_6G030940 Cucumis sativus L. HOM05D004566 ORTHO05D006041 1.0e-45 188.0 118 83.9
Sabra05G0143600 Salix brachista HOM05D004566 ORTHO05D006041 1.0e-45 188.0 118 83.9
arahy.Tifrunner.gnm1.ann1.9SPN5G Arachis hypogaea HOM05D004566 ORTHO05D006041 1.3e-45 187.6 118 82.2
arahy.Tifrunner.gnm1.ann1.FR9HZZ Arachis hypogaea HOM05D004566 ORTHO05D006041 1.3e-45 187.6 118 82.2
arahy.Tifrunner.gnm1.ann1.J7270J Arachis hypogaea HOM05D004566 ORTHO05D006041 1.3e-45 187.6 118 82.2
arahy.Tifrunner.gnm1.ann1.WMJ7PV Arachis hypogaea HOM05D004566 ORTHO05D006041 1.3e-45 187.6 118 82.2
Psat7g096680 Pisum sativum HOM05D004566 ORTHO05D006041 1.3e-45 187.6 118 82.2
VMungo1309G3090 Vigna mungo HOM05D004566 ORTHO05D006041 1.3e-45 187.6 118 82.2
Peaxi162Scf00263g00417 Petunia axillaris HOM05D004566 ORTHO05D006041 1.7e-45 187.2 118 80.5
RcHm_v2.0_Chr6g0277061 Rosa chinensis HOM05D004566 ORTHO05D006041 1.7e-45 187.2 118 82.2
TWI15G0549 Tripterygium wilfordii HOM05D004566 ORTHO05D006041 1.7e-45 187.2 118 83.1
Manes.18G088000 Manihot esculenta HOM05D004566 ORTHO05D006041 2.2e-45 186.8 118 82.2
Potri.002G071600 Populus trichocarpa HOM05D004566 ORTHO05D006041 2.2e-45 186.8 118 83.1
ATR0706G031 Amborella trichopoda HOM05D004566 ORTHO05D006041 2.9e-45 186.4 118 82.2
BcaC08g45467 Brassica carinata HOM05D004566 ORTHO05D006041 2.9e-45 186.4 120 80.8
Cc03_g13150 Coffea canephora HOM05D004566 ORTHO05D006041 2.9e-45 186.4 118 81.4
TPR.G18763 Trifolium pratense HOM05D004566 ORTHO05D006041 2.9e-45 186.4 118 81.4
Zm00001eb172280 Zea mays HOM05D004566 ORTHO05D006041 2.9e-45 186.4 126 77.8
Sed0000192 Sechium edule HOM05D004566 ORTHO05D006041 3.8e-45 186.0 118 83.1
Sc02g0000500 Simmondsia chinensis HOM05D004566 ORTHO05D006041 3.8e-45 186.0 118 82.2
Aqoxy6G02084 Aquilegia oxysepala HOM05D004566 ORTHO05D006041 8.5e-45 184.9 118 81.4
SHI09399 Sapria himalayana HOM05D004566 ORTHO05D006041 8.5e-45 184.9 118 80.5
vmacro05453 Vaccinium macrocarpon HOM05D004566 ORTHO05D006041 8.5e-45 184.9 118 82.2
Actinidia15158 Actinidia chinensis HOM05D004566 ORTHO05D006041 1.4e-44 184.1 117 82.9
BcaC08g45487 Brassica carinata HOM05D004566 ORTHO05D006041 1.4e-44 184.1 117 81.2
BolC6t38277H Brassica oleracea HOM05D004566 ORTHO05D006041 1.4e-44 184.1 117 81.2
Nn5g28636 Nelumbo nucifera HOM05D004566 ORTHO05D006041 1.9e-44 183.7 118 78.8
Os02g0437800 Oryza sativa ssp. japonica HOM05D004566 ORTHO05D006041 1.9e-44 183.7 126 77.0
Rhsim02G0231500 Rhododendron simsii HOM05D004566 ORTHO05D006041 3.2e-44 183.0 138 71.7
SalBow6G5540 Salvia bowleyana HOM05D004566 ORTHO05D006041 7.2e-44 181.8 118 80.5
PSO017G6839 Papaver somniferum HOM05D004566 ORTHO05D006041 9.4e-44 181.4 118 78.8
MSTRG.24197 Avicennia marina HOM05D004566 ORTHO05D006041 3.6e-43 179.5 118 78.8
SGA_v2.0_scaffold19G08652 Striga asiatica HOM05D004566 ORTHO05D006041 3.6e-43 179.5 118 78.8
SGA_v2.0_scaffold25G11162 Striga asiatica HOM05D004566 ORTHO05D006041 3.6e-43 179.5 118 78.8
Migut.N03233 Erythranthe guttata HOM05D004566 ORTHO05D006041 6.1e-43 178.7 118 79.7
BraA02t07132Z Brassica rapa HOM05D004566 ORTHO05D006041 7.9e-43 178.3 140 71.4
MBI11_g07422_MAGBIO Magnolia biondii HOM05D004566 ORTHO05D006041 1.4e-42 177.6 119 78.2
HPP92_000105 Vanilla planifolia HOM05D004566 ORTHO05D006041 3.0e-42 176.4 118 78.0
PSO170G1270 Papaver somniferum HOM05D004566 ORTHO05D006041 8.8e-42 174.9 118 78.0
EL10Ac5g10990 Beta vulgaris HOM05D004566 ORTHO05D006041 1.7e-40 170.6 163 60.7
CANSAT25G2177 Cannabis sativa HOM05D004566 ORTHO05D006041 1.1e-39 167.9 118 75.4
Manes.02G175600 Manihot esculenta HOM05D004566 ORTHO05D006041 1.1e-39 167.9 133 69.9
COL.COLO4_03835 Corchorus olitorius HOM05D004566 ORTHO05D006041 1.7e-37 160.6 88 92.0
Oeu014477.2 Olea europaea HOM05D004566 ORTHO05D006041 1.1e-36 157.9 187 51.9
SEGI_30655 Sequoiadendron giganteum HOM05D004566 ORTHO05D006041 7.2e-36 155.2 118 66.9
Pp3c18_21360 Physcomitrium patens HOM05D004566 ORTHO05D006041 1.4e-31 141.0 118 60.2
Mapoly0133s0009 Marchantia polymorpha HOM05D004566 ORTHO05D006041 1.8e-31 140.6 118 61.0
BolC6t38256H Brassica oleracea HOM05D004566 ORTHO05D006041 2.4e-31 140.2 112 69.6
unitig_52.g17535 Utricularia gibba HOM05D004566 ORTHO05D006041 2.5e-28 130.2 132 57.6
CBR_g40854 Chara braunii HOM05D004566 ORTHO05D006041 2.1e-27 127.1 126 52.4
SMO118G0298 Selaginella moellendorffii HOM05D004566 ORTHO05D006041 2.2e-24 117.1 107 56.1
AagrBONN_evm.TU.Sc2ySwM_344.3227 Anthoceros agrestis HOM05D004566 ORTHO05D006041 8.3e-24 115.2 101 60.4
MD10G1016100 Malus domestica HOM05D004566 ORTHO05D006041 2.2e-21 107.1 66 83.3
Prupe.8G019800 Prunus persica HOM05D004566 ORTHO05D006041 1.1e-20 104.8 66 80.3
Cpa.g.sc49.59 Carica papaya HOM05D004566 ORTHO05D006041 1.2e-19 101.3 66 77.3
Cpa.g.sc49.57 Carica papaya HOM05D004566 ORTHO05D006041 6.8e-18 95.5 54 90.7
C06p30980 Brassica napus HOM05D004566 ORTHO05D040413 3.7e-16 89.7 54 85.2
BraA07t30435Z Brassica rapa HOM05D004566 ORTHO05D040413 1.8e-15 87.4 52 86.5
CDE06G0844 Ceratophyllum demersum HOM05D004566 ORTHO05D006041 8.0e-11 72.0 40 75.0
Cre07.g333950 Chlamydomonas reinhardtii HOM05D004566 ORTHO05D006041 6.8e-10 68.9 118 33.1
AagrBONN_evm.TU.Sc2ySwM_344.5277 Anthoceros agrestis HOM05D004566 ORTHO05D006041 5.7e-09 65.9 49 65.3
PRCOL_00003824 Prasinoderma coloniale HOM05D004566 ORTHO05D006041 9.8e-09 65.1 125 32.0
BcaC08g45465 Brassica carinata HOM05D004566 ORTHO05D006041 1.2e-06 58.2 30 86.7


User provided reference genes

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