Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p024429 Quercus lobata HOM05D006533 ORTHO05D008625 6.9e-142 507.3 257 100.0
QL09p024067 Quercus lobata HOM05D006533 ORTHO05D008625 5.9e-125 451.1 285 83.9
Cfa006012 Carpinus fangiana HOM05D006533 ORTHO05D008625 8.3e-103 377.5 285 70.5
CiPaw.06G033000 Carya illinoinensis HOM05D006533 ORTHO05D008625 3.5e-101 372.1 285 68.8
GSVIVG01024411001 Vitis vinifera HOM05D006533 ORTHO05D008625 4.9e-95 351.7 286 66.4
Sabra13G0070900 Salix brachista HOM05D006533 ORTHO05D008625 3.5e-93 345.5 285 66.0
Thecc.01G135900 Theobroma cacao HOM05D006533 ORTHO05D008625 2.5e-91 339.3 272 67.6
Gorai.006G005800 Gossypium raimondii HOM05D006533 ORTHO05D008625 3.3e-91 339.0 280 66.4
Gohir.D09G004200 Gossypium hirsutum HOM05D006533 ORTHO05D008625 4.3e-91 338.6 280 66.4
Hma1.2p1_3802F.1_g337635 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 5.6e-91 338.2 286 66.8
Gohir.A09G004900 Gossypium hirsutum HOM05D006533 ORTHO05D008625 6.2e-90 334.7 280 65.7
Prupe.2G325700 Prunus persica HOM05D006533 ORTHO05D008625 8.0e-90 334.3 286 62.9
Dinv17259 Davidia involucrata HOM05D006533 ORTHO05D008625 1.8e-89 333.2 285 66.0
Ciclev10020455m.g Citrus clementina HOM05D006533 ORTHO05D008625 5.2e-89 331.6 284 64.1
MD07G1308500 Malus domestica HOM05D006533 ORTHO05D008625 5.2e-89 331.6 286 65.0
CANSAT56G1022 Cannabis sativa HOM05D006533 ORTHO05D008625 4.4e-88 328.6 287 62.0
RcHm_v2.0_Chr1g0384131 Rosa chinensis HOM05D006533 ORTHO05D008625 4.4e-88 328.6 285 61.8
CANSAT56G3916 Cannabis sativa HOM05D006533 ORTHO05D008625 5.8e-88 328.2 287 62.0
Lj3A887G72 Lonicera japonica HOM05D006533 ORTHO05D008625 1.3e-87 327.0 262 65.6
Actinidia34305 Actinidia chinensis HOM05D006533 ORTHO05D008625 2.2e-87 326.2 286 64.3
Potri.013G082000 Populus trichocarpa HOM05D006533 ORTHO05D008625 2.2e-87 326.2 285 64.2
vmacro06509 Vaccinium macrocarpon HOM05D006533 ORTHO05D008625 3.7e-87 325.5 286 62.2
FvH4_7g33920 Fragaria vesca HOM05D006533 ORTHO05D008625 8.3e-87 324.3 285 61.1
FAN10G3989 Fragaria x ananassa HOM05D006533 ORTHO05D008625 8.3e-87 324.3 285 61.4
FAN03G0602 Fragaria x ananassa HOM05D006533 ORTHO05D008625 1.0e-84 317.4 285 60.7
Sed0002742 Sechium edule HOM05D006533 ORTHO05D008625 3.9e-84 315.5 285 60.0
Eucgr.K00088 Eucalyptus grandis HOM05D006533 ORTHO05D008625 1.9e-83 313.2 285 61.4
ClCG05G007010 Citrullus lanatus HOM05D006533 ORTHO05D008625 2.5e-83 312.8 285 59.3
Atru.chr1.2781 Acer truncatum HOM05D006533 ORTHO05D008625 3.3e-83 312.4 285 60.7
CsaV3_3G015700 Cucumis sativus L. HOM05D006533 ORTHO05D008625 9.5e-83 310.8 285 59.3
Lalb_Chr09g0320221 Lupinus albus HOM05D006533 ORTHO05D008625 4.0e-81 305.4 285 61.1
arahy.Tifrunner.gnm1.ann1.NII7HE Arachis hypogaea HOM05D006533 ORTHO05D008625 2.2e-79 299.7 278 60.4
ECA232G2080 Erigeron canadensis HOM05D006533 ORTHO05D008625 2.9e-79 299.3 281 59.1
Cc02_g00290 Coffea canephora HOM05D006533 ORTHO05D008625 8.3e-79 297.7 285 58.9
Lsat_1_v5_gn_9_47461 Lactuca sativa HOM05D006533 ORTHO05D008625 1.1e-78 297.4 273 60.8
Sopen02g038900 Solanum pennellii HOM05D006533 ORTHO05D008625 2.4e-78 296.2 286 57.3
PGSC0003DMG400020249 Solanum tuberosum HOM05D006533 ORTHO05D008625 3.2e-78 295.8 286 57.3
Solyc02g094260.1 Solanum lycopersicum HOM05D006533 ORTHO05D008625 4.1e-78 295.4 286 57.0
Lj6g0021866 Lotus japonicus HOM05D006533 ORTHO05D008625 7.1e-78 294.7 285 58.2
Cpa.g.sc39.72 Carica papaya HOM05D006533 ORTHO05D008625 2.1e-77 293.1 252 63.1
AL6G27960 Arabidopsis lyrata HOM05D006533 ORTHO05D008625 1.3e-76 290.4 262 59.2
Oeu060384.1 Olea europaea HOM05D006533 ORTHO05D008625 1.3e-76 290.4 278 58.3
THA.LOC104820882 Tarenaya hassleriana HOM05D006533 ORTHO05D008625 2.3e-76 289.7 259 60.6
Sabra06G0125800 Salix brachista HOM05D006533 ORTHO05D008625 6.6e-76 288.1 285 58.2
Aa31LG11G12640 Aethionema arabicum HOM05D006533 ORTHO05D008625 1.9e-75 286.6 262 58.4
Glyma.11G011100 Glycine max HOM05D006533 ORTHO05D008625 1.9e-75 286.6 285 58.9
arahy.Tifrunner.gnm1.ann1.YJZS8S Arachis hypogaea HOM05D006533 ORTHO05D008625 3.3e-75 285.8 304 55.6
Glyma.01G228300 Glycine max HOM05D006533 ORTHO05D008625 3.3e-75 285.8 282 59.2
PSO063G2320 Papaver somniferum HOM05D006533 ORTHO05D008625 1.2e-74 283.9 286 55.6
Ca_24442_v3 Cicer arietinum L. HOM05D006533 ORTHO05D008625 3.6e-74 282.3 284 58.1
Migut.F00098 Erythranthe guttata HOM05D006533 ORTHO05D008625 3.6e-74 282.3 284 57.4
Aqoxy3G02101 Aquilegia oxysepala HOM05D006533 ORTHO05D008625 4.7e-74 282.0 285 54.4
CARHR196200 Cardamine hirsuta HOM05D006533 ORTHO05D008625 8.1e-74 281.2 262 56.9
Manes.09G124800 Manihot esculenta HOM05D006533 ORTHO05D008625 8.1e-74 281.2 285 57.2
MSTRG.8576 Avicennia marina HOM05D006533 ORTHO05D008625 1.4e-73 280.4 280 54.3
TAR374G0999 Trochodendron aralioides HOM05D006533 ORTHO05D008625 1.8e-73 280.0 286 56.6
Phvul.002G039600 Phaseolus vulgaris HOM05D006533 ORTHO05D008625 2.3e-73 279.6 282 56.4
SGA_v2.0_scaffold18G08508 Striga asiatica HOM05D006533 ORTHO05D008625 2.3e-73 279.6 274 55.1
Hma1.2p1_0758F.1_g213704 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.1e-73 279.3 286 58.7
Hma1.2p1_0758F.1_g213747 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.1e-73 279.3 286 58.7
AUR62002060 Chenopodium quinoa HOM05D006533 ORTHO05D008625 6.8e-73 278.1 285 55.4
HanXRQChr05g0141721 Helianthus annuus HOM05D006533 ORTHO05D008625 1.2e-72 277.3 262 59.2
CSS0012834 Camellia sinensis var. sinensis HOM05D006533 ORTHO05D008625 1.5e-72 276.9 286 57.7
Nitab4.5_0001510g0030 Nicotiana tabacum HOM05D006533 ORTHO05D008625 1.5e-72 276.9 312 51.9
Hma1.2p1_0758F.1_g213725 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.6e-72 276.2 286 58.4
Hma1.2p1_0758F.1_g213730 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.6e-72 276.2 286 58.4
Hma1.2p1_0758F.1_g213741 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.6e-72 276.2 286 58.4
Hma1.2p1_0758F.1_g213746 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.6e-72 276.2 286 58.4
Hma1.2p1_3802F.1_g337637 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.6e-72 276.2 286 58.4
Duzib264G0907 Durio zibethinus HOM05D006533 ORTHO05D008625 3.4e-72 275.8 280 57.1
Psat2g188880 Pisum sativum HOM05D006533 ORTHO05D008625 3.4e-72 275.8 284 57.0
AUR62028174 Chenopodium quinoa HOM05D006533 ORTHO05D008625 4.4e-72 275.4 285 55.8
Sc06g0002540 Simmondsia chinensis HOM05D006533 ORTHO05D008625 1.7e-71 273.5 282 55.7
Medtr5g007700 Medicago truncatula HOM05D006533 ORTHO05D008625 4.9e-71 271.9 286 55.9
PGR142G1840 Punica granatum HOM05D006533 ORTHO05D008625 8.4e-71 271.2 278 54.0
COL.COLO4_35796 Corchorus olitorius HOM05D006533 ORTHO05D008625 9.2e-70 267.7 281 55.5
HPP92_005443 Vanilla planifolia HOM05D006533 ORTHO05D008625 1.2e-69 267.3 286 52.4
unitig_0.g2430 Utricularia gibba HOM05D006533 ORTHO05D008625 1.1e-67 260.8 275 51.6
Psat2g075360 Pisum sativum HOM05D006533 ORTHO05D008625 7.3e-67 258.1 283 54.8
MELO3C006767.2 Cucumis melo HOM05D006533 ORTHO05D008625 4.0e-65 252.3 285 51.6
EL10Ac3g05080 Beta vulgaris HOM05D006533 ORTHO05D008625 8.9e-65 251.1 305 48.9
VMungo1215G1087 Vigna mungo HOM05D006533 ORTHO05D008625 8.9e-65 251.1 259 55.6
Ah.04g156530 Amaranthus hybridus HOM05D006533 ORTHO05D008625 2.0e-64 250.0 262 53.8
ATR0829G094 Amborella trichopoda HOM05D006533 ORTHO05D008625 2.0e-64 250.0 301 47.5
Rhsim03G0221300 Rhododendron simsii HOM05D006533 ORTHO05D008625 4.9e-63 245.4 301 50.8
Peaxi162Scf00133g00721 Petunia axillaris HOM05D006533 ORTHO05D008625 5.4e-62 241.9 286 50.0
DCAR_009009 Daucus carota HOM05D006533 ORTHO05D008625 9.3e-62 241.1 202 64.9
LjContig00222g0024674 Lotus japonicus HOM05D006533 ORTHO05D008625 2.1e-61 240.0 212 62.7
Nn1g01934 Nelumbo nucifera HOM05D006533 ORTHO05D008625 2.1e-61 240.0 285 50.9
CAN.G473.117 Capsicum annuum HOM05D006533 ORTHO05D008625 6.0e-61 238.4 210 61.9
Medtr5g061700 Medicago truncatula HOM05D006533 ORTHO05D008625 1.7e-60 236.9 292 50.3
MBI04_g36026_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 2.3e-60 236.5 286 49.3
Nitab4.5_0005342g0010 Nicotiana tabacum HOM05D006533 ORTHO05D008625 3.0e-60 236.1 336 45.5
Zm00001eb268960 Zea mays HOM05D006533 ORTHO05D008625 1.1e-59 234.2 286 47.6
PSO782G0079 Papaver somniferum HOM05D006533 ORTHO05D008625 2.5e-59 233.0 210 60.0
Os06g0114600 Oryza sativa ssp. japonica HOM05D006533 ORTHO05D008625 3.3e-59 232.6 286 47.2
TPR.G37965 Trifolium pratense HOM05D006533 ORTHO05D008625 2.8e-58 229.6 242 57.4
Hund09790 Selenicereus undatus HOM05D006533 ORTHO05D008625 5.3e-57 225.3 286 48.3
CDE11G1068 Ceratophyllum demersum HOM05D006533 ORTHO05D004827 1.6e-53 213.8 213 55.9
SalBow4G2334 Salvia bowleyana HOM05D006533 ORTHO05D008625 4.6e-53 212.2 274 47.1
SMO340G0278 Selaginella moellendorffii HOM05D006533 ORTHO05D008625 2.0e-48 196.8 276 39.9
Pp3c15_5730 Physcomitrium patens HOM05D006533 ORTHO05D008625 4.9e-47 192.2 308 39.3
Mapoly0015s0191 Marchantia polymorpha HOM05D006533 ORTHO05D008625 1.4e-46 190.7 337 38.6
SalBow4G1971 Salvia bowleyana HOM05D006533 ORTHO05D008625 2.7e-37 159.8 184 51.1
arahy.Tifrunner.gnm1.ann1.1W8L1U Arachis hypogaea HOM05D006533 ORTHO05D008625 6.9e-33 145.2 97 77.3
TPR.G22023 Trifolium pratense HOM05D006533 ORTHO05D008625 4.5e-32 142.5 96 81.2
SEGI_31434 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 5.5e-30 135.6 113 64.6
CBR_g24301 Chara braunii HOM05D006533 ORTHO05D008625 5.1e-28 129.0 258 35.7
HPP92_005432 Vanilla planifolia HOM05D006533 ORTHO05D008625 1.6e-26 124.0 178 42.7
MBI06_g38702_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 4.6e-21 105.9 122 47.5
SEGI_03149 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 5.3e-17 92.4 208 33.7
MBI12_g01582_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 7.9e-13 78.6 146 35.6


User provided reference genes

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