Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p015613 Quercus lobata HOM05D001104 ORTHO05D006535 1.2e-36 156.0 80 100.0
MBI02_g43974_MAGBIO Magnolia biondii HOM05D001104 ORTHO05D006535 1.2e-20 102.8 67 80.6
MBI02_g24293_MAGBIO Magnolia biondii HOM05D001104 ORTHO05D006535 4.7e-20 100.9 67 79.1
QL05p057213 Quercus lobata HOM05D001104 ORTHO05D006535 2.6e-18 95.1 113 55.8
QL05p057244 Quercus lobata HOM05D001104 ORTHO05D006535 1.3e-17 92.8 113 54.9
Migut.M00896 Erythranthe guttata HOM05D001104 ORTHO05D006535 1.6e-15 85.9 88 56.8
CANSAT35G0592 Cannabis sativa HOM05D001104 ORTHO05D006535 3.5e-15 84.7 113 51.3
Potri.011G083300 Populus trichocarpa HOM05D001104 ORTHO05D006535 7.7e-15 83.6 113 49.6
CiPaw.10G090500 Carya illinoinensis HOM05D001104 ORTHO05D006535 1.0e-14 83.2 118 49.2
COL.COLO4_26643 Corchorus olitorius HOM05D001104 ORTHO05D006535 1.7e-14 82.4 113 49.6
Gohir.D10G043100 Gossypium hirsutum HOM05D001104 ORTHO05D006535 1.7e-14 82.4 113 49.6
Gorai.011G045700 Gossypium raimondii HOM05D001104 ORTHO05D006535 1.7e-14 82.4 113 49.6
Rhsim13G0115200 Rhododendron simsii HOM05D001104 ORTHO05D006535 2.2e-14 82.0 113 49.6
Thecc.06G148200 Theobroma cacao HOM05D001104 ORTHO05D006535 2.2e-14 82.0 113 50.4
Sabra11G0066300 Salix brachista HOM05D001104 ORTHO05D006535 2.9e-14 81.6 118 47.5
Ca_00531_v3 Cicer arietinum L. HOM05D001104 ORTHO05D006535 5.0e-14 80.9 113 47.8
Duzib235G0771 Durio zibethinus HOM05D001104 ORTHO05D006535 6.5e-14 80.5 113 49.6
Dinv32236 Davidia involucrata HOM05D001104 ORTHO05D006535 8.5e-14 80.1 113 48.7
Manes.17G072000 Manihot esculenta HOM05D001104 ORTHO05D006535 8.5e-14 80.1 113 49.6
Atru.chr10.1174 Acer truncatum HOM05D001104 ORTHO05D006535 1.1e-13 79.7 113 48.7
Cc11_g03520 Coffea canephora HOM05D001104 ORTHO05D006535 1.1e-13 79.7 113 46.9
Ciclev10016002m.g Citrus clementina HOM05D001104 ORTHO05D006535 1.5e-13 79.3 113 48.7
Gohir.A10G042200 Gossypium hirsutum HOM05D001104 ORTHO05D006535 1.5e-13 79.3 113 48.7
Aqoxy4G00068 Aquilegia oxysepala HOM05D001104 ORTHO05D006535 1.9e-13 79.0 113 47.8
TWI53G0561 Tripterygium wilfordii HOM05D001104 ORTHO05D006535 1.9e-13 79.0 113 46.9
CSS0046912 Camellia sinensis var. sinensis HOM05D001104 ORTHO05D006535 2.5e-13 78.6 113 47.8
Lj6g0000691 Lotus japonicus HOM05D001104 ORTHO05D006535 3.2e-13 78.2 113 47.8
Oeu030938.1 Olea europaea HOM05D001104 ORTHO05D006535 3.2e-13 78.2 113 46.0
Prupe.4G083000 Prunus persica HOM05D001104 ORTHO05D006535 3.2e-13 78.2 113 47.8
GSVIVG01004589001 Vitis vinifera HOM05D001104 ORTHO05D006535 3.2e-13 78.2 113 46.9
GSVIVG01021522001 Vitis vinifera HOM05D001104 ORTHO05D006535 3.2e-13 78.2 113 46.9
MBI02_g46874_MAGBIO Magnolia biondii HOM05D001104 ORTHO05D006535 4.2e-13 77.8 113 47.8
Medtr2g019140 Medicago truncatula HOM05D001104 ORTHO05D006535 4.2e-13 77.8 113 46.9
TAR627G0692 Trochodendron aralioides HOM05D001104 ORTHO05D006535 4.2e-13 77.8 113 47.8
MELO3C002750.2 Cucumis melo HOM05D001104 ORTHO05D006535 5.5e-13 77.4 113 46.9
CsaV3_1G004620 Cucumis sativus L. HOM05D001104 ORTHO05D006535 5.5e-13 77.4 113 46.9
BcaC09g51528 Brassica carinata HOM05D001104 ORTHO05D006535 1.2e-12 76.3 113 46.0
BcaNung00010 Brassica carinata HOM05D001104 ORTHO05D006535 1.2e-12 76.3 113 46.0
A01p10280 Brassica napus HOM05D001104 ORTHO05D006535 1.2e-12 76.3 113 46.0
C01p12230 Brassica napus HOM05D001104 ORTHO05D006535 1.2e-12 76.3 113 46.0
BolC1t01199H Brassica oleracea HOM05D001104 ORTHO05D006535 1.2e-12 76.3 113 46.0
BraA01t00975Z Brassica rapa HOM05D001104 ORTHO05D006535 1.2e-12 76.3 113 46.0
Cpa.g.sc17.5 Carica papaya HOM05D001104 ORTHO05D006535 1.2e-12 76.3 113 46.9
Eucgr.E02422 Eucalyptus grandis HOM05D001104 ORTHO05D006535 1.2e-12 76.3 113 45.1
Sed0007195 Sechium edule HOM05D001104 ORTHO05D006535 1.2e-12 76.3 113 46.0
Lj2A320T43 Lonicera japonica HOM05D001104 ORTHO05D006535 1.6e-12 75.9 113 46.9
MD05G1281600 Malus domestica HOM05D001104 ORTHO05D006535 1.6e-12 75.9 113 46.0
Solyc08g048550.3 Solanum lycopersicum HOM05D001104 ORTHO05D006535 2.1e-12 75.5 113 46.0
Sopen08g010960 Solanum pennellii HOM05D001104 ORTHO05D006535 2.1e-12 75.5 113 46.0
ClCG03G006710 Citrullus lanatus HOM05D001104 ORTHO05D006535 2.7e-12 75.1 113 45.1
Haze_05624 Corylus avellana HOM05D001104 ORTHO05D006535 2.7e-12 75.1 71 60.6
Lalb_Chr18g0055331 Lupinus albus HOM05D001104 ORTHO05D006535 2.7e-12 75.1 113 45.1
PGSC0003DMG400029873 Solanum tuberosum HOM05D001104 ORTHO05D006535 2.7e-12 75.1 113 45.1
Glyma.13G219400 Glycine max HOM05D001104 ORTHO05D006535 3.6e-12 74.7 113 46.9
CAN.G1145.1 Capsicum annuum HOM05D001104 ORTHO05D006535 6.1e-12 73.9 113 45.1
AUR62002715 Chenopodium quinoa HOM05D001104 ORTHO05D006535 8.0e-12 73.6 110 45.5
Thhalv10025708m.g Eutrema salsugineum HOM05D001104 ORTHO05D006535 8.0e-12 73.6 113 44.2
Lsat_1_v5_gn_7_27640 Lactuca sativa HOM05D001104 ORTHO05D006535 8.0e-12 73.6 113 44.2
Nitab4.5_0000833g0070 Nicotiana tabacum HOM05D001104 ORTHO05D006535 8.0e-12 73.6 113 45.1
Peaxi162Scf00317g00115 Petunia axillaris HOM05D001104 ORTHO05D006535 8.0e-12 73.6 113 45.1
THA.LOC104812860 Tarenaya hassleriana HOM05D001104 ORTHO05D006535 8.0e-12 73.6 113 45.1
FvH4_3g05290 Fragaria vesca HOM05D001104 ORTHO05D006535 1.0e-11 73.2 113 45.1
FAN11G2893 Fragaria x ananassa HOM05D001104 ORTHO05D006535 1.0e-11 73.2 113 45.1
Nn4g26599 Nelumbo nucifera HOM05D001104 ORTHO05D006535 1.0e-11 73.2 113 45.1
Sp7g15700 Schrenkiella parvula HOM05D001104 ORTHO05D006535 1.0e-11 73.2 113 44.2
AUR62030175 Chenopodium quinoa HOM05D001104 ORTHO05D006535 1.4e-11 72.8 110 45.5
ECA236G1178 Erigeron canadensis HOM05D001104 ORTHO05D006535 1.4e-11 72.8 113 44.2
HPP92_015669 Vanilla planifolia HOM05D001104 ORTHO05D006535 1.4e-11 72.8 113 44.2
vmacro03335 Vaccinium macrocarpon HOM05D001104 ORTHO05D006535 1.8e-11 72.4 116 44.8
ATR1098G116 Amborella trichopoda HOM05D001104 ORTHO05D006535 2.3e-11 72.0 112 44.6
FAN25G1463 Fragaria x ananassa HOM05D001104 ORTHO05D006535 2.3e-11 72.0 113 44.2
Psat1g191040 Pisum sativum HOM05D001104 ORTHO05D006535 2.3e-11 72.0 113 45.1
RcHm_v2.0_Chr5g0014431 Rosa chinensis HOM05D001104 ORTHO05D006535 2.3e-11 72.0 113 44.2
CARHR225140 Cardamine hirsuta HOM05D001104 ORTHO05D006535 3.0e-11 71.6 113 43.4
SalBow8G4304 Salvia bowleyana HOM05D001104 ORTHO05D006535 3.0e-11 71.6 110 45.5
VMungo0540G2226 Vigna mungo HOM05D001104 ORTHO05D006535 3.0e-11 71.6 113 45.1
FAN21G1335 Fragaria x ananassa HOM05D001104 ORTHO05D006535 5.2e-11 70.9 113 44.2
HanXRQChr04g0115731 Helianthus annuus HOM05D001104 ORTHO05D006535 5.2e-11 70.9 113 42.5
TPR.G26235 Trifolium pratense HOM05D001104 ORTHO05D006535 5.2e-11 70.9 113 45.1
Actinidia33715 Actinidia chinensis HOM05D001104 ORTHO05D006535 8.8e-11 70.1 71 57.7
Carub.0007s2292 Capsella rubella HOM05D001104 ORTHO05D006535 8.8e-11 70.1 113 43.4
DCAR_003899 Daucus carota HOM05D001104 ORTHO05D006535 8.8e-11 70.1 113 44.2
AL7G36010 Arabidopsis lyrata HOM05D001104 ORTHO05D006535 1.1e-10 69.7 113 42.5
CDE02G4088 Ceratophyllum demersum HOM05D001104 ORTHO05D006535 1.5e-10 69.3 76 55.3
AT4G18370 Arabidopsis thaliana HOM05D001104 ORTHO05D006535 2.0e-10 68.9 113 42.5
Aa31LG6G1070 Aethionema arabicum HOM05D001104 ORTHO05D006535 2.6e-10 68.6 113 41.6
EL10Ac8g19654 Beta vulgaris HOM05D001104 ORTHO05D006535 2.6e-10 68.6 111 42.3
SGA_v2.0_scaffold1G00192 Striga asiatica HOM05D001104 ORTHO05D006535 2.6e-10 68.6 115 42.6
Ah.14g086390 Amaranthus hybridus HOM05D001104 ORTHO05D006535 3.3e-10 68.2 110 43.6
Sc24g0001720 Simmondsia chinensis HOM05D001104 ORTHO05D006535 3.3e-10 68.2 79 51.9
arahy.Tifrunner.gnm1.ann1.VE11WY Arachis hypogaea HOM05D001104 ORTHO05D006535 5.7e-10 67.4 71 52.1
PGR031G0308 Punica granatum HOM05D001104 ORTHO05D006535 9.7e-10 66.6 71 53.5
Hund17819 Selenicereus undatus HOM05D001104 ORTHO05D006535 9.7e-10 66.6 110 42.7
FAN16G1841 Fragaria x ananassa HOM05D001104 ORTHO05D006535 1.3e-09 66.2 79 49.4
Phvul.006G166100 Phaseolus vulgaris HOM05D001104 ORTHO05D006535 3.7e-09 64.7 74 56.8
Glyma.15G092800 Glycine max HOM05D001104 ORTHO05D006535 6.3e-09 63.9 70 54.3
PSO675G4930 Papaver somniferum HOM05D001104 ORTHO05D006535 8.2e-09 63.5 125 40.0
PSO017G5739 Papaver somniferum HOM05D001104 ORTHO05D006535 1.4e-08 62.8 114 42.1
PSO396G0001 Papaver somniferum HOM05D001104 ORTHO05D006535 1.4e-08 62.8 114 42.1
CBR_g8333 Chara braunii HOM05D001104 ORTHO05D006535 3.1e-08 61.6 71 52.1
Duzib133G1354 Durio zibethinus HOM05D001104 ORTHO05D006535 3.1e-08 61.6 118 39.8
arahy.Tifrunner.gnm1.ann1.RHLD0A Arachis hypogaea HOM05D001104 ORTHO05D006535 1.6e-07 59.3 32 90.6
arahy.Tifrunner.gnm1.ann1.ZA2NY6 Arachis hypogaea HOM05D001104 ORTHO05D006535 5.9e-07 57.4 32 87.5
Pp3c1_16510 Physcomitrium patens HOM05D001104 ORTHO05D006535 5.9e-07 57.4 105 41.0
AagrBONN_evm.TU.Sc2ySwM_117.1824 Anthoceros agrestis HOM05D001104 ORTHO05D006535 7.7e-07 57.0 130 35.4
arahy.Tifrunner.gnm1.ann1.8VZU0U Arachis hypogaea HOM05D001104 ORTHO05D006535 7.7e-07 57.0 63 52.4
CDE05G3320 Ceratophyllum demersum HOM05D001104 ORTHO05D006535 2.2e-06 55.5 30 90.0
SMO134G0095 Selaginella moellendorffii HOM05D001104 ORTHO05D006535 2.2e-06 55.5 109 36.7
SMO361G0158 Selaginella moellendorffii HOM05D001104 ORTHO05D006285 8.5e-06 53.5 121 35.5


User provided reference genes

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