Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p014019 Quercus lobata HOM05D000368 ORTHO05D009348 5.2e-115 418.3 318 100.0
Cfa008323 Carpinus fangiana HOM05D000368 ORTHO05D009348 7.4e-53 211.8 319 70.5
CiPaw.04G071400 Carya illinoinensis HOM05D000368 ORTHO05D009348 3.7e-52 209.5 318 68.9
Dinv35216 Davidia involucrata HOM05D000368 ORTHO05D000289 9.1e-51 204.9 317 63.1
Haze_13700 Corylus avellana HOM05D000368 ORTHO05D009348 9.7e-45 184.9 311 68.8
Ciclev10005579m.g Citrus clementina HOM05D000368 ORTHO05D009348 1.1e-40 171.4 321 59.8
TAR629G3168 Trochodendron aralioides HOM05D000368 ORTHO05D009348 7.2e-40 168.7 324 57.7
Potri.012G141700 Populus trichocarpa HOM05D000368 ORTHO05D009348 3.0e-38 163.3 317 58.0
TWI39G0209 Tripterygium wilfordii HOM05D000368 ORTHO05D009348 7.5e-37 158.7 318 62.3
GSVIVG01028962001 Vitis vinifera HOM05D000368 ORTHO05D009348 7.5e-37 158.7 318 57.5
Rhsim09G0197900 Rhododendron simsii HOM05D000368 ORTHO05D009348 4.8e-36 156.0 315 56.2
Cpa.g.sc107.59 Carica papaya HOM05D000368 ORTHO05D009348 8.3e-36 155.2 318 59.7
Sabra15G0154200 Salix brachista HOM05D000368 ORTHO05D009348 1.1e-35 154.8 317 58.7
Manes.14G025600 Manihot esculenta HOM05D000368 ORTHO05D009348 3.1e-35 153.3 317 58.0
Prupe.2G295100 Prunus persica HOM05D000368 ORTHO05D009348 4.1e-35 152.9 318 51.3
PGR142G2510 Punica granatum HOM05D000368 ORTHO05D009348 1.2e-34 151.4 318 62.3
Glyma.20G159100 Glycine max HOM05D000368 ORTHO05D009348 2.7e-34 150.2 316 60.1
Thecc.03G177600 Theobroma cacao HOM05D000368 ORTHO05D009348 2.7e-34 150.2 320 57.8
Cc02_g02880 Coffea canephora HOM05D000368 ORTHO05D009348 3.5e-34 149.8 319 50.5
Potri.015G144600 Populus trichocarpa HOM05D000368 ORTHO05D009348 4.5e-34 149.4 320 57.8
ClCG05G008070 Citrullus lanatus HOM05D000368 ORTHO05D009348 1.7e-33 147.5 319 60.8
Eucgr.K00263 Eucalyptus grandis HOM05D000368 ORTHO05D009348 8.6e-33 145.2 316 54.7
MELO3C006911.2 Cucumis melo HOM05D000368 ORTHO05D009348 1.5e-32 144.4 156 69.2
Aa31LG3G8750 Aethionema arabicum HOM05D000368 ORTHO05D009348 3.3e-32 143.3 317 52.1
Glyma.10G235200 Glycine max HOM05D000368 ORTHO05D009348 4.2e-32 142.9 317 59.9
CsaV3_3G017130 Cucumis sativus L. HOM05D000368 ORTHO05D009348 7.2e-32 142.1 318 59.1
MD07G1269700 Malus domestica HOM05D000368 ORTHO05D009348 1.2e-31 141.4 319 49.5
Lj5g0009535 Lotus japonicus HOM05D000368 ORTHO05D009348 2.1e-31 140.6 316 59.8
CANSAT21G1838 Cannabis sativa HOM05D000368 ORTHO05D009348 6.1e-31 139.0 285 64.6
Sed0010584 Sechium edule HOM05D000368 ORTHO05D009348 1.4e-30 137.9 318 58.5
Hund11743 Selenicereus undatus HOM05D000368 ORTHO05D009348 1.8e-30 137.5 319 53.9
THA.LOC104811975 Tarenaya hassleriana HOM05D000368 ORTHO05D009348 2.3e-30 137.1 317 54.3
Lsat_1_v5_gn_2_132381 Lactuca sativa HOM05D000368 ORTHO05D009348 3.0e-30 136.7 319 59.2
Gorai.008G276900 Gossypium raimondii HOM05D000368 ORTHO05D009348 6.8e-30 135.6 318 51.6
MD01G1201700 Malus domestica HOM05D000368 ORTHO05D009348 8.9e-30 135.2 320 53.4
Gohir.D12G258500 Gossypium hirsutum HOM05D000368 ORTHO05D009348 1.2e-29 134.8 318 51.6
arahy.Tifrunner.gnm1.ann1.C4Z81U Arachis hypogaea HOM05D000368 ORTHO05D009348 1.5e-29 134.4 324 56.5
Solyc03g025740.4 Solanum lycopersicum HOM05D000368 ORTHO05D009348 1.5e-29 134.4 318 55.3
Nitab4.5_0002117g0050 Nicotiana tabacum HOM05D000368 ORTHO05D009348 2.0e-29 134.0 320 46.6
PSO782G2079 Papaver somniferum HOM05D000368 ORTHO05D009348 2.0e-29 134.0 319 56.7
Lalb_Chr21g0305051 Lupinus albus HOM05D000368 ORTHO05D009348 2.6e-29 133.7 316 54.4
Gohir.A12G257200 Gossypium hirsutum HOM05D000368 ORTHO05D009348 5.7e-29 132.5 318 52.2
Sc19g0001470 Simmondsia chinensis HOM05D000368 ORTHO05D009348 5.7e-29 132.5 317 57.4
Actinidia31822 Actinidia chinensis HOM05D000368 ORTHO05D009348 7.5e-29 132.1 156 75.0
CSS0028945 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 7.5e-29 132.1 150 70.7
CSS0042203 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 7.5e-29 132.1 150 66.7
HanXRQChr07g0207001 Helianthus annuus HOM05D000368 ORTHO05D009348 7.5e-29 132.1 337 51.9
ECA238G2658 Erigeron canadensis HOM05D000368 ORTHO05D000289 9.8e-29 131.7 318 56.6
PSO063G1784 Papaver somniferum HOM05D000368 ORTHO05D009348 9.8e-29 131.7 319 53.6
RcHm_v2.0_Chr1g0377401 Rosa chinensis HOM05D000368 ORTHO05D009348 9.8e-29 131.7 319 49.8
Sopen03g004560 Solanum pennellii HOM05D000368 ORTHO05D009348 1.3e-28 131.3 318 55.7
DCAR_020244 Daucus carota HOM05D000368 ORTHO05D009348 2.2e-28 130.6 283 55.8
PGSC0003DMG402014344 Solanum tuberosum HOM05D000368 ORTHO05D009348 1.8e-27 127.5 316 53.8
Hma1.2p1_0270F.1_g107970 Hydrangea macrophylla HOM05D000368 ORTHO05D009348 2.4e-27 127.1 319 55.2
Aqoxy5G04003 Aquilegia oxysepala HOM05D000368 ORTHO05D009348 5.4e-27 125.9 323 57.3
MSTRG.8734 Avicennia marina HOM05D000368 ORTHO05D009348 5.4e-27 125.9 317 56.8
VMungo0720G3173 Vigna mungo HOM05D000368 ORTHO05D009348 5.4e-27 125.9 329 51.1
arahy.Tifrunner.gnm1.ann1.HM7G91 Arachis hypogaea HOM05D000368 ORTHO05D009348 7.0e-27 125.6 323 54.5
FAN06G0492 Fragaria x ananassa HOM05D000368 ORTHO05D009348 2.0e-26 124.0 319 48.6
FAN06G1486 Fragaria x ananassa HOM05D000368 ORTHO05D009348 4.5e-26 122.9 319 48.6
Phvul.007G070700 Phaseolus vulgaris HOM05D000368 ORTHO05D009348 1.3e-25 121.3 291 51.5
EL10Ac3g05631 Beta vulgaris HOM05D000368 ORTHO05D009348 2.9e-25 120.2 318 50.6
FAN10G1532 Fragaria x ananassa HOM05D000368 ORTHO05D009348 3.9e-25 119.8 319 52.7
SGA_v2.0_scaffold44G16725 Striga asiatica HOM05D000368 ORTHO05D009348 5.0e-25 119.4 322 49.4
Duzib205G0377 Durio zibethinus HOM05D000368 ORTHO05D000289 1.1e-24 118.2 296 54.4
TPR.G27005 Trifolium pratense HOM05D000368 ORTHO05D009348 1.1e-24 118.2 328 39.0
Ah.13g068650 Amaranthus hybridus HOM05D000368 ORTHO05D009348 2.5e-24 117.1 327 45.9
AT5G52380 Arabidopsis thaliana HOM05D000368 ORTHO05D009348 3.3e-24 116.7 319 51.1
vmacro09836 Vaccinium macrocarpon HOM05D000368 ORTHO05D000289 3.3e-24 116.7 300 41.0
Nn1g01474 Nelumbo nucifera HOM05D000368 ORTHO05D009348 4.3e-24 116.3 324 53.1
AL8G26780 Arabidopsis lyrata HOM05D000368 ORTHO05D009348 5.6e-24 115.9 319 52.7
Dinv28433 Davidia involucrata HOM05D000368 ORTHO05D009348 9.5e-24 115.2 128 65.6
Carub.0008s1248 Capsella rubella HOM05D000368 ORTHO05D009348 1.2e-23 114.8 318 53.5
Psat0s3135g0040 Pisum sativum HOM05D000368 ORTHO05D009348 1.2e-23 114.8 316 54.4
Atru.BG.181.p Acer truncatum HOM05D000368 ORTHO05D009348 1.6e-23 114.4 101 62.4
Atru.chr1.452 Acer truncatum HOM05D000368 ORTHO05D009348 1.6e-23 114.4 101 62.4
Ca_10757_v3 Cicer arietinum L. HOM05D000368 ORTHO05D009348 6.1e-23 112.5 316 34.8
FAN10G1519 Fragaria x ananassa HOM05D000368 ORTHO05D009348 6.1e-23 112.5 315 51.4
Sp6g14600 Schrenkiella parvula HOM05D000368 ORTHO05D000289 6.8e-22 109.0 129 60.5
FAN01G1188 Fragaria x ananassa HOM05D000368 ORTHO05D009348 8.9e-22 108.6 303 48.2
Dinv24555 Davidia involucrata HOM05D000368 ORTHO05D009348 4.4e-21 106.3 103 60.2
CARHR265330 Cardamine hirsuta HOM05D000368 ORTHO05D009348 1.3e-20 104.8 319 51.7
MBI17_g19093_MAGBIO Magnolia biondii HOM05D000368 ORTHO05D009348 1.7e-20 104.4 339 45.4
Thhalv10014379m.g Eutrema salsugineum HOM05D000368 ORTHO05D009348 6.4e-20 102.4 104 59.6
FvH4_7g29542 Fragaria vesca HOM05D000368 ORTHO05D009348 1.9e-19 100.9 155 44.5
A03p15700 Brassica napus HOM05D000368 ORTHO05D000289 2.4e-19 100.5 118 46.6
C09p41730 Brassica napus HOM05D000368 ORTHO05D000289 2.4e-19 100.5 103 61.2
BolC9t57061H Brassica oleracea HOM05D000368 ORTHO05D009348 2.4e-19 100.5 103 61.2
AUR62015971 Chenopodium quinoa HOM05D000368 ORTHO05D009348 3.2e-19 100.1 262 55.3
Migut.F00336 Erythranthe guttata HOM05D000368 ORTHO05D009348 3.2e-19 100.1 156 62.2
BolC3t14232H Brassica oleracea HOM05D000368 ORTHO05D000289 4.1e-19 99.8 117 46.2
BraA03t10861Z Brassica rapa HOM05D000368 ORTHO05D000289 7.0e-19 99.0 118 44.9
C03p18350 Brassica napus HOM05D000368 ORTHO05D000289 2.0e-18 97.4 105 57.1
Dinv24556 Davidia involucrata HOM05D000368 ORTHO05D009348 1.5e-16 91.3 194 57.2
ATR0680G368 Amborella trichopoda HOM05D000368 ORTHO05D009348 2.8e-15 87.0 106 62.3
HPP92_006518 Vanilla planifolia HOM05D000368 ORTHO05D009348 1.8e-14 84.3 103 41.7
HPP92_018588 Vanilla planifolia HOM05D000368 ORTHO05D009348 1.8e-14 84.3 103 41.7
Zm00001eb074410 Zea mays HOM05D000368 ORTHO05D009348 2.3e-14 84.0 106 44.3
Os04g0555800 Oryza sativa ssp. japonica HOM05D000368 ORTHO05D009348 2.0e-13 80.9 103 50.5
AagrBONN_evm.TU.Sc2ySwM_117.528 Anthoceros agrestis HOM05D000368 ORTHO05D009348 2.4e-11 73.9 104 48.1
Actinidia03122 Actinidia chinensis HOM05D000368 ORTHO05D009348 1.6e-10 71.2 48 68.8
Mapoly0006s0064 Marchantia polymorpha HOM05D000368 ORTHO05D009348 2.1e-10 70.9 102 50.0
SEGI_15321 Sequoiadendron giganteum HOM05D000368 ORTHO05D009348 5.1e-09 66.2 103 58.3
Pp3c16_20170 Physcomitrium patens HOM05D000368 ORTHO05D009348 1.1e-08 65.1 49 53.1
Dinv28434 Davidia involucrata HOM05D000368 ORTHO05D000289 1.5e-08 64.7 66 57.6
BraA10t43080Z Brassica rapa HOM05D000368 ORTHO05D009348 1.9e-08 64.3 39 69.2
A10p09970 Brassica napus HOM05D000368 ORTHO05D009348 6.2e-07 59.3 29 82.8
Nitab4.5_0001842g0090 Nicotiana tabacum HOM05D000368 ORTHO05D009348 6.2e-07 59.3 94 46.8
arahy.Tifrunner.gnm1.ann1.4PMG8D Arachis hypogaea HOM05D000368 ORTHO05D009348 2.3e-06 57.4 63 54.0
CSS0015725 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 6.8e-06 55.8 62 54.8


User provided reference genes

Program Settings