Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL09p012523 Quercus lobata HOM05D002465 ORTHO05D008860 4.3e-187 657.9 347 100.0
Cfa016296 Carpinus fangiana HOM05D002465 ORTHO05D008860 4.6e-157 558.1 345 85.5
CiPaw.05G261500 Carya illinoinensis HOM05D002465 ORTHO05D008860 8.7e-156 553.9 347 84.7
QL09p012480 Quercus lobata HOM05D002465 ORTHO05D008860 2.4e-153 545.8 347 86.2
Haze_00056 Corylus avellana HOM05D002465 ORTHO05D008860 2.7e-149 532.3 340 84.1
Duzib205G0883 Durio zibethinus HOM05D002465 ORTHO05D008860 2.7e-141 505.8 344 76.5
Atru.chr1.341 Acer truncatum HOM05D002465 ORTHO05D008860 4.6e-141 505.0 348 74.7
Prupe.2G302000 Prunus persica HOM05D002465 ORTHO05D008860 1.5e-139 500.0 322 79.8
Thecc.03G185600 Theobroma cacao HOM05D002465 ORTHO05D008860 1.5e-139 500.0 344 76.5
MD07G1279900 Malus domestica HOM05D002465 ORTHO05D008860 1.7e-138 496.5 325 79.7
Potri.004G072500 Populus trichocarpa HOM05D002465 ORTHO05D008860 5.9e-136 488.0 345 74.8
CANSAT21G1380 Cannabis sativa HOM05D002465 ORTHO05D008860 1.3e-135 486.9 322 77.3
Sabra04G0047800 Salix brachista HOM05D002465 ORTHO05D008860 1.4e-134 483.4 330 77.0
FvH4_7g30420 Fragaria vesca HOM05D002465 ORTHO05D008860 1.9e-134 483.0 322 77.0
FAN06G4105 Fragaria x ananassa HOM05D002465 ORTHO05D008860 2.5e-134 482.6 322 77.0
FAN01G0734 Fragaria x ananassa HOM05D002465 ORTHO05D008860 4.2e-134 481.9 322 77.3
FAN03G2954 Fragaria x ananassa HOM05D002465 ORTHO05D008860 4.2e-134 481.9 322 76.7
COL.COLO4_30296 Corchorus olitorius HOM05D002465 ORTHO05D008860 5.5e-134 481.5 344 73.3
FAN10G1848 Fragaria x ananassa HOM05D002465 ORTHO05D008860 7.2e-134 481.1 322 76.7
Ciclev10006645m.g Citrus clementina HOM05D002465 ORTHO05D008860 1.6e-133 479.9 341 73.0
FAN06G0587 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.6e-133 479.9 322 76.7
Glyma.20G163100 Glycine max HOM05D002465 ORTHO05D008860 1.6e-133 479.9 331 76.1
Lalb_Chr02g0141271 Lupinus albus HOM05D002465 ORTHO05D008860 1.0e-132 477.2 333 74.8
VMungo0720G1208 Vigna mungo HOM05D002465 ORTHO05D008860 1.0e-132 477.2 331 75.2
FAN10G3921 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.8e-132 476.5 322 76.1
TWI23G0306 Tripterygium wilfordii HOM05D002465 ORTHO05D008860 1.8e-132 476.5 324 76.9
Phvul.007G075300 Phaseolus vulgaris HOM05D002465 ORTHO05D008860 6.7e-132 474.6 331 74.9
CAN.G204.25 Capsicum annuum HOM05D002465 ORTHO05D008860 8.8e-132 474.2 322 72.0
Medtr1g099620 Medicago truncatula HOM05D002465 ORTHO05D008860 1.1e-131 473.8 319 76.5
arahy.Tifrunner.gnm1.ann1.R026RD Arachis hypogaea HOM05D002465 ORTHO05D008860 3.7e-130 468.8 320 76.9
Ca_10714_v3 Cicer arietinum L. HOM05D002465 ORTHO05D008860 3.7e-130 468.8 319 74.6
Manes.14G021500 Manihot esculenta HOM05D002465 ORTHO05D008860 6.3e-130 468.0 318 77.4
Gohir.D12G255800 Gossypium hirsutum HOM05D002465 ORTHO05D008860 8.2e-130 467.6 324 73.8
TPR.G7770 Trifolium pratense HOM05D002465 ORTHO05D008860 3.1e-129 465.7 323 74.3
Cpa.g.sc107.122 Carica papaya HOM05D002465 ORTHO05D008860 4.1e-129 465.3 315 74.6
Gorai.008G273900 Gossypium raimondii HOM05D002465 ORTHO05D008860 4.1e-129 465.3 324 73.1
Gohir.A12G253500 Gossypium hirsutum HOM05D002465 ORTHO05D008860 1.2e-128 463.8 324 73.1
PGSC0003DMG400037424 Solanum tuberosum HOM05D002465 ORTHO05D008860 4.5e-128 461.8 320 71.6
PGSC0003DMG402028895 Solanum tuberosum HOM05D002465 ORTHO05D008860 4.5e-128 461.8 320 71.6
Psat6g195800 Pisum sativum HOM05D002465 ORTHO05D008860 3.8e-127 458.8 337 71.2
Sopen06g012110 Solanum pennellii HOM05D002465 ORTHO05D008860 4.2e-126 455.3 318 70.4
Solyc06g036330.1 Solanum lycopersicum HOM05D002465 ORTHO05D008860 1.2e-125 453.8 318 70.1
Lj5g0014102 Lotus japonicus HOM05D002465 ORTHO05D008860 1.6e-125 453.4 320 73.1
Cc02_g02280 Coffea canephora HOM05D002465 ORTHO05D008860 1.0e-124 450.7 328 71.3
THA.LOC104811948 Tarenaya hassleriana HOM05D002465 ORTHO05D008860 8.8e-124 447.6 346 66.2
Thhalv10014103m.g Eutrema salsugineum HOM05D002465 ORTHO05D008860 2.6e-123 446.0 322 69.9
Dinv35265 Davidia involucrata HOM05D002465 ORTHO05D008860 1.3e-122 443.7 312 74.7
CARHR265740 Cardamine hirsuta HOM05D002465 ORTHO05D008860 9.1e-121 437.6 318 70.1
AL8G27240 Arabidopsis lyrata HOM05D002465 ORTHO05D008860 2.6e-120 436.0 322 68.0
Sed0017948 Sechium edule HOM05D002465 ORTHO05D008860 4.5e-120 435.3 319 70.2
AT5G52810 Arabidopsis thaliana HOM05D002465 ORTHO05D008860 1.3e-119 433.7 321 67.0
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 1.3e-119 433.7 317 69.1
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 1.7e-119 433.3 317 69.1
Aa31LG3G9050 Aethionema arabicum HOM05D002465 ORTHO05D008860 2.2e-119 433.0 320 67.5
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 2.2e-119 433.0 317 69.1
CSS0010708 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D008860 2.9e-119 432.6 325 69.5
BcaB05g21982 Brassica carinata HOM05D002465 ORTHO05D008860 3.8e-119 432.2 322 67.4
ClCG05G008460 Citrullus lanatus HOM05D002465 ORTHO05D008860 6.5e-119 431.4 341 66.3
PGR142G3674 Punica granatum HOM05D002465 ORTHO05D008860 1.1e-118 430.6 321 69.5
Nn6g32108 Nelumbo nucifera HOM05D002465 ORTHO05D008860 4.2e-118 428.7 337 65.0
Nn6g32109 Nelumbo nucifera HOM05D002465 ORTHO05D008860 4.2e-118 428.7 337 65.0
CsaV3_3G017540 Cucumis sativus L. HOM05D002465 ORTHO05D008860 9.4e-118 427.6 336 67.0
MELO3C006954.2 Cucumis melo HOM05D002465 ORTHO05D008860 6.1e-117 424.9 344 64.8
arahy.Tifrunner.gnm1.ann1.9T5AB0 Arachis hypogaea HOM05D002465 ORTHO05D008860 1.8e-116 423.3 319 71.5
Aqoxy5G00658 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 2.3e-116 422.9 332 65.7
DCAR_014522 Daucus carota HOM05D002465 ORTHO05D008860 6.8e-116 421.4 320 67.8
EL10Ac3g05401 Beta vulgaris HOM05D002465 ORTHO05D008860 8.8e-116 421.0 330 66.7
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 2.0e-115 419.9 305 68.9
Nitab4.5_0004854g0030 Nicotiana tabacum HOM05D002465 ORTHO05D008860 4.4e-115 418.7 289 71.6
AUR62031433 Chenopodium quinoa HOM05D002465 ORTHO05D008860 2.2e-114 416.4 318 68.2
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 3.7e-114 415.6 303 69.3
Ah.07g206480 Amaranthus hybridus HOM05D002465 ORTHO05D008860 6.3e-114 414.8 321 66.7
Peaxi162Scf00618g00066 Petunia axillaris HOM05D002465 ORTHO05D008860 9.1e-113 411.0 267 74.2
BcaC03g14498 Brassica carinata HOM05D002465 ORTHO05D008860 2.0e-112 409.8 320 65.3
MBI11_g09066_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D008860 3.5e-112 409.1 324 65.1
Migut.F01082 Erythranthe guttata HOM05D002465 ORTHO05D008860 1.3e-111 407.1 319 65.8
SalBow2G2390 Salvia bowleyana HOM05D002465 ORTHO05D008860 5.0e-111 405.2 318 63.5
Lsat_1_v5_gn_2_131440 Lactuca sativa HOM05D002465 ORTHO05D008860 8.5e-111 404.4 322 64.6
TAR374G0466 Trochodendron aralioides HOM05D002465 ORTHO05D008860 2.7e-109 399.4 335 62.4
PSO478G0039 Papaver somniferum HOM05D002465 ORTHO05D008860 4.8e-106 388.7 320 63.4
HanXRQChr07g0206921 Helianthus annuus HOM05D002465 ORTHO05D008860 8.3e-106 387.9 318 62.9
ECA238G0507 Erigeron canadensis HOM05D002465 ORTHO05D008860 3.1e-105 386.0 332 61.4
Sc13g0009250 Simmondsia chinensis HOM05D002465 ORTHO05D008860 3.5e-104 382.5 322 61.5
AUR62021108 Chenopodium quinoa HOM05D002465 ORTHO05D008860 3.0e-100 369.4 265 71.3
vmacro06619 Vaccinium macrocarpon HOM05D002465 ORTHO05D008860 2.0e-99 366.7 327 60.6
Nitab4.5_0016317g0010 Nicotiana tabacum HOM05D002465 ORTHO05D008860 6.3e-98 361.7 238 73.9
SGA_v2.0_scaffold10G05284 Striga asiatica HOM05D002465 ORTHO05D008860 1.1e-97 360.9 329 59.6
Eucgr.L01486 Eucalyptus grandis HOM05D002465 ORTHO05D008860 7.5e-91 338.2 319 59.2
Glyma.10G230300 Glycine max HOM05D002465 ORTHO05D008860 1.6e-88 330.5 297 63.3
unitig_26.g10201 Utricularia gibba HOM05D002465 ORTHO05D008860 5.0e-87 325.5 261 61.3
Os10g0533200 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D008860 4.0e-84 315.8 321 53.6
CDE07G0391 Ceratophyllum demersum HOM05D002465 ORTHO05D008860 1.9e-81 307.0 316 51.6
SEGI_38444 Sequoiadendron giganteum HOM05D002465 ORTHO05D008860 1.9e-81 307.0 324 51.5
ATR0661G059 Amborella trichopoda HOM05D002465 ORTHO05D008860 3.9e-79 299.3 325 53.5
Zm00001eb021880 Zea mays HOM05D002465 ORTHO05D008860 5.6e-78 295.4 323 51.1
RcHm_v2.0_Chr1g0378551 Rosa chinensis HOM05D002465 ORTHO05D008860 1.1e-70 271.2 189 73.5
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 6.2e-69 265.4 228 62.3
Carub.0008s1297 Capsella rubella HOM05D002465 ORTHO05D008860 4.0e-68 262.7 189 68.8
HPP92_015083 Vanilla planifolia HOM05D002465 ORTHO05D008860 1.2e-67 261.2 324 48.1
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 4.4e-67 259.2 204 64.7
Mapoly0033s0116 Marchantia polymorpha HOM05D002465 ORTHO05D008860 9.9e-67 258.1 323 44.6
CANSAT01G1695 Cannabis sativa HOM05D002465 ORTHO05D008860 3.8e-66 256.1 163 79.1
HPP92_028539 Vanilla planifolia HOM05D002465 ORTHO05D008860 6.0e-56 222.2 201 57.7
AagrBONN_evm.TU.Sc2ySwM_362.356 Anthoceros agrestis HOM05D002465 ORTHO05D008860 2.6e-43 180.3 253 42.7
Aqoxy5G00661 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 1.0e-39 168.3 109 76.1
Aqoxy5G00666 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 4.3e-38 162.9 109 74.3
Cfa016297 Carpinus fangiana HOM05D002465 ORTHO05D008860 3.2e-33 146.7 86 86.0
Pp3s46_180 Physcomitrium patens HOM05D002465 ORTHO05D028651 4.6e-24 116.3 272 27.2
GSVIVG01028828001 Vitis vinifera HOM05D002465 ORTHO05D008860 2.3e-23 114.0 110 60.0
Pp3c1_3280 Physcomitrium patens HOM05D002465 ORTHO05D008860 6.9e-20 102.4 120 45.0
Actinidia34162 Actinidia chinensis HOM05D002465 ORTHO05D008860 2.3e-15 87.4 82 62.2
Cfa016299 Carpinus fangiana HOM05D002465 ORTHO05D008860 1.1e-09 68.6 82 54.9


User provided reference genes

Program Settings