Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p013846 Quercus lobata HOM05D009787 ORTHO05D013837 2.6e-174 615.5 366 100.0
QL08p013893 Quercus lobata HOM05D009787 ORTHO05D013837 2.7e-38 163.7 264 41.3
QL08p013887 Quercus lobata HOM05D009787 ORTHO05D013837 8.3e-32 142.1 157 47.1
QL08p013890 Quercus lobata HOM05D009787 ORTHO05D013837 1.7e-29 134.4 227 44.5
Cfa020447 Carpinus fangiana HOM05D009787 ORTHO05D013837 5.8e-25 119.4 147 45.6
Cfa020439 Carpinus fangiana HOM05D009787 ORTHO05D013837 1.1e-23 115.2 150 47.3
Cfa020452 Carpinus fangiana HOM05D009787 ORTHO05D013837 7.1e-23 112.5 151 43.0
Haze_09589 Corylus avellana HOM05D009787 ORTHO05D013837 2.1e-19 100.9 114 47.4
Cfa020441 Carpinus fangiana HOM05D009787 ORTHO05D013837 6.2e-19 99.4 157 38.2
Cfa020442 Carpinus fangiana HOM05D009787 ORTHO05D013837 1.8e-18 97.8 113 45.1
Cfa020446 Carpinus fangiana HOM05D009787 ORTHO05D013837 3.1e-18 97.1 113 45.1
Cfa008321 Carpinus fangiana HOM05D009787 ORTHO05D013837 3.4e-17 93.6 175 36.0
Cfa010316 Carpinus fangiana HOM05D009787 ORTHO05D013837 3.4e-17 93.6 100 45.0
Cfa020440 Carpinus fangiana HOM05D009787 ORTHO05D013837 3.5e-14 83.6 113 41.6
TWI38G2366 Tripterygium wilfordii HOM05D009787 ORTHO05D013837 8.7e-13 79.0 131 35.9
MSTRG.9015 Avicennia marina HOM05D000538 ORTHO05D000614 1.1e-10 72.0 146 35.6
Cfa020445 Carpinus fangiana HOM05D009787 ORTHO05D013837 2.4e-10 70.9 114 36.0
ClCG01G022290 Citrullus lanatus HOM05D000538 ORTHO05D000614 6.9e-10 69.3 140 35.0
CsaV3_6G049420 Cucumis sativus L. HOM05D000538 ORTHO05D000614 1.5e-09 68.2 170 34.1
SalBow5G1539 Salvia bowleyana HOM05D000538 ORTHO05D000614 2.0e-09 67.8 146 34.9
Dinv22316 Davidia involucrata HOM05D000359 ORTHO05D000251 2.6e-09 67.4 150 32.7
SalBow6G4402 Salvia bowleyana HOM05D000538 ORTHO05D000614 2.9e-08 63.9 150 34.7
Sed0011252 Sechium edule HOM05D000538 ORTHO05D000614 3.8e-08 63.5 162 32.7
COL.COLO4_17402 Corchorus olitorius HOM05D000538 ORTHO05D000614 4.9e-08 63.2 174 29.3
CiPaw.09G080200 Carya illinoinensis HOM05D000538 ORTHO05D000614 1.1e-07 62.0 174 30.5
MELO3C027126.2 Cucumis melo HOM05D000538 ORTHO05D000614 1.1e-07 62.0 169 33.7
Atru.chr1.3753 Acer truncatum HOM05D000538 ORTHO05D000614 1.4e-07 61.6 92 38.0
SalBow6G5108 Salvia bowleyana HOM05D000538 ORTHO05D000614 1.4e-07 61.6 160 34.4
PGSC0003DMG400030831 Solanum tuberosum HOM05D000538 ORTHO05D000614 1.4e-07 61.6 141 31.2
TAR627G0243 Trochodendron aralioides HOM05D000538 ORTHO05D000614 1.4e-07 61.6 138 34.8
Sopen04g029590 Solanum pennellii HOM05D000538 ORTHO05D000614 2.4e-07 60.8 141 31.2
ATR0109G030 Amborella trichopoda HOM05D000538 ORTHO05D000614 4.2e-07 60.1 156 28.8
Thecc.07G148000 Theobroma cacao HOM05D000538 ORTHO05D000614 4.2e-07 60.1 170 30.6
SGA_v2.0_scaffold12G06174 Striga asiatica HOM05D000538 ORTHO05D000614 9.3e-07 58.9 94 35.1
MSTRG.14651 Avicennia marina HOM05D000538 ORTHO05D000614 1.2e-06 58.5 173 34.1
Duzib213G0460 Durio zibethinus HOM05D000538 ORTHO05D000614 1.2e-06 58.5 171 29.2
Sed0014375 Sechium edule HOM05D000538 ORTHO05D000614 2.1e-06 57.8 160 30.6
MSTRG.13164 Avicennia marina HOM05D000538 ORTHO05D000614 2.7e-06 57.4 161 31.7
Dinv10905 Davidia involucrata HOM05D000538 ORTHO05D000614 2.7e-06 57.4 144 31.9
Duzib268G1429 Durio zibethinus HOM05D000538 ORTHO05D000614 2.7e-06 57.4 170 28.8
Nitab4.5_0002840g0090 Nicotiana tabacum HOM05D000538 ORTHO05D000614 2.7e-06 57.4 121 33.9
Nitab4.5_0008264g0010 Nicotiana tabacum HOM05D000538 ORTHO05D000614 2.7e-06 57.4 138 32.6
Oeu051232.1 Olea europaea HOM05D000538 ORTHO05D000614 2.7e-06 57.4 174 30.5
ATR0796G211 Amborella trichopoda HOM05D000538 ORTHO05D000614 3.5e-06 57.0 195 29.7
Ah.06g192650 Amaranthus hybridus HOM05D000538 ORTHO05D000614 4.6e-06 56.6 95 35.8
Duzib248G0414 Durio zibethinus HOM05D000538 ORTHO05D000614 4.6e-06 56.6 105 33.3
Actinidia05541 Actinidia chinensis HOM05D000538 ORTHO05D000614 6.0e-06 56.2 89 39.3
CiPaw.04G118800 Carya illinoinensis HOM05D000538 ORTHO05D000614 6.0e-06 56.2 85 34.1
Ciclev10011975m.g Citrus clementina HOM05D000538 ORTHO05D000614 6.0e-06 56.2 117 35.9
Peaxi162Scf00030g00224 Petunia axillaris HOM05D000538 ORTHO05D000614 6.0e-06 56.2 150 32.7
Actinidia26954 Actinidia chinensis HOM05D000538 ORTHO05D000614 7.9e-06 55.8 89 39.3
Ciclev10015528m.g Citrus clementina HOM05D000538 ORTHO05D000614 7.9e-06 55.8 160 31.2
QL93p0107_0037 Quercus lobata HOM05D000538 ORTHO05D000614 7.9e-06 55.8 87 34.5


User provided reference genes

Program Settings