Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p000602 Quercus lobata HOM05D006287 ORTHO05D008192 3.6e-118 430.3 215 100.0
QL05p049822 Quercus lobata HOM05D006287 ORTHO05D008192 6.6e-88 329.7 205 81.5
Haze_21571 Corylus avellana HOM05D006287 ORTHO05D008192 2.1e-70 271.6 227 64.8
CiPaw.06G059600 Carya illinoinensis HOM05D006287 ORTHO05D008192 2.2e-59 235.0 224 57.6
Cpa.g.sc1.269 Carica papaya HOM05D006287 ORTHO05D008192 6.7e-48 196.8 212 52.4
CANSAT11G2472 Cannabis sativa HOM05D006287 ORTHO05D008192 7.4e-47 193.4 163 57.1
Duzib168G0154 Durio zibethinus HOM05D006287 ORTHO05D008192 4.8e-46 190.7 217 48.4
Thecc.09G149000 Theobroma cacao HOM05D006287 ORTHO05D008192 4.5e-44 184.1 219 49.3
Duzib150G0458 Durio zibethinus HOM05D006287 ORTHO05D008192 2.2e-43 181.8 222 48.6
CSS0048694 Camellia sinensis var. sinensis HOM05D006287 ORTHO05D008192 8.4e-43 179.9 217 47.9
Dinv11617 Davidia involucrata HOM05D006287 ORTHO05D008192 2.5e-42 178.3 197 50.8
Prupe.6G275900 Prunus persica HOM05D006287 ORTHO05D008192 1.0e-40 172.9 212 49.5
GSVIVG01035807001 Vitis vinifera HOM05D006287 ORTHO05D008192 1.5e-39 169.1 166 53.0
Gorai.011G097400 Gossypium raimondii HOM05D006287 ORTHO05D008192 4.3e-39 167.5 195 47.7
Hma1.2p1_0007F.1_g005110 Hydrangea macrophylla HOM05D006287 ORTHO05D008192 9.7e-39 166.4 178 47.2
Ca_26550_v3 Cicer arietinum L. HOM05D006287 ORTHO05D008192 8.2e-38 163.3 122 63.1
TWI63G1321 Tripterygium wilfordii HOM05D006287 ORTHO05D008192 1.8e-37 162.2 236 41.5
CSS0042508 Camellia sinensis var. sinensis HOM05D006287 ORTHO05D008192 3.1e-37 161.4 175 50.3
Actinidia15687 Actinidia chinensis HOM05D006287 ORTHO05D008192 4.1e-37 161.0 168 49.4
Psat7g237040 Pisum sativum HOM05D006287 ORTHO05D008192 6.9e-37 160.2 128 56.2
COL.COLO4_23984 Corchorus olitorius HOM05D006287 ORTHO05D008192 9.0e-37 159.8 207 44.4
RcHm_v2.0_Chr7g0216391 Rosa chinensis HOM05D006287 ORTHO05D008192 1.2e-36 159.5 204 50.5
Atru.chr7.2375 Acer truncatum HOM05D006287 ORTHO05D008192 2.0e-36 158.7 222 47.3
LjContig00081g0002723 Lotus japonicus HOM05D006287 ORTHO05D008192 4.5e-36 157.5 128 57.8
Ciclev10010816m.g Citrus clementina HOM05D006287 ORTHO05D008192 1.3e-35 156.0 203 46.8
Lalb_Chr07g0185941 Lupinus albus HOM05D006287 ORTHO05D008192 1.3e-35 156.0 159 50.3
Glyma.07G068500 Glycine max HOM05D006287 ORTHO05D008192 1.4e-34 152.5 187 47.6
Phvul.009G090400 Phaseolus vulgaris HOM05D006287 ORTHO05D008192 1.4e-34 152.5 185 49.7
VMungo0331G1641 Vigna mungo HOM05D006287 ORTHO05D008192 1.4e-34 152.5 198 44.4
Potri.006G250700 Populus trichocarpa HOM05D006287 ORTHO05D008192 3.2e-34 151.4 193 46.6
Oeu008766.1 Olea europaea HOM05D006287 ORTHO05D008192 2.1e-33 148.7 206 42.2
arahy.Tifrunner.gnm1.ann1.VPFI8Q Arachis hypogaea HOM05D006287 ORTHO05D008192 7.9e-33 146.7 165 46.7
Medtr4g076540 Medicago truncatula HOM05D006287 ORTHO05D008192 3.9e-32 144.4 197 42.6
Sabra06G0196000 Salix brachista HOM05D001686 ORTHO05D008192 9.7e-31 139.8 176 46.0
Lj7C718G17 Lonicera japonica HOM05D006287 ORTHO05D008192 1.3e-30 139.4 221 39.8
Oeu032501.2 Olea europaea HOM05D006287 ORTHO05D008192 1.7e-30 139.0 166 46.4
TPR.G5411 Trifolium pratense HOM05D008207 ORTHO05D010373 4.8e-30 137.5 138 51.4
Cc11_g01810 Coffea canephora HOM05D006287 ORTHO05D008192 8.2e-30 136.7 185 40.0
PGR142G2973 Punica granatum HOM05D006287 ORTHO05D008192 7.7e-28 130.2 193 35.8
Eucgr.I01690 Eucalyptus grandis HOM05D006287 ORTHO05D008192 1.7e-27 129.0 186 41.9
Sed0018262 Sechium edule HOM05D006287 ORTHO05D008192 1.1e-26 126.3 213 37.6
Nitab4.5_0001669g0010 Nicotiana tabacum HOM05D006287 ORTHO05D008192 1.4e-26 125.9 141 44.0
MSTRG.25851 Avicennia marina HOM05D006287 ORTHO05D008192 3.2e-26 124.8 216 36.6
ClCG02G013330 Citrullus lanatus HOM05D006287 ORTHO05D008192 5.5e-26 124.0 129 45.7
THA.LOC104824237 Tarenaya hassleriana HOM05D006287 ORTHO05D008192 1.2e-25 122.9 211 37.0
Peaxi162Scf00341g00062 Petunia axillaris HOM05D006287 ORTHO05D008192 1.6e-25 122.5 203 37.9
TPR.G5606 Trifolium pratense HOM05D006287 ORTHO05D008192 3.6e-25 121.3 178 41.0
Nn5g27729 Nelumbo nucifera HOM05D006287 ORTHO05D008192 2.3e-24 118.6 148 43.2
PGSC0003DMG400023145 Solanum tuberosum HOM05D006287 ORTHO05D008192 2.3e-24 118.6 170 37.6
HanXRQChr02g0050751 Helianthus annuus HOM05D006287 ORTHO05D008192 3.9e-24 117.9 200 41.5
Nitab4.5_0000151g0190 Nicotiana tabacum HOM05D006287 ORTHO05D008192 5.1e-24 117.5 182 37.4
Sed0001816 Sechium edule HOM05D006287 ORTHO05D008192 5.1e-24 117.5 210 35.2
AL4G36540 Arabidopsis lyrata HOM05D006287 ORTHO05D008192 1.5e-23 115.9 196 34.7
MELO3C020947.2 Cucumis melo HOM05D006287 ORTHO05D008192 1.5e-23 115.9 203 36.9
FvH4_5g25890 Fragaria vesca HOM05D006287 ORTHO05D008192 1.5e-23 115.9 133 51.1
FAN18G3351 Fragaria x ananassa HOM05D006287 ORTHO05D008192 1.5e-23 115.9 133 51.1
Sp4g21560 Schrenkiella parvula HOM05D006287 ORTHO05D008192 4.4e-23 114.4 210 37.1
SpUn0018_0110 Schrenkiella parvula HOM05D006287 ORTHO05D008192 4.4e-23 114.4 210 37.1
Solyc08g067060.2 Solanum lycopersicum HOM05D006287 ORTHO05D008192 9.7e-23 113.2 140 39.3
Sopen08g021010 Solanum pennellii HOM05D006287 ORTHO05D008192 1.3e-22 112.8 140 39.3
CsaV3_2G017510 Cucumis sativus L. HOM05D006287 ORTHO05D008192 1.7e-22 112.5 203 36.9
Thhalv10010921m.g Eutrema salsugineum HOM05D006287 ORTHO05D008192 2.2e-22 112.1 197 39.1
CAN.G98.23 Capsicum annuum HOM05D006287 ORTHO05D008192 2.8e-22 111.7 138 42.0
Lsat_1_v5_gn_6_22161 Lactuca sativa HOM05D006287 ORTHO05D008192 2.8e-22 111.7 153 42.5
Aa31sc33G30 Aethionema arabicum HOM05D006287 ORTHO05D008192 1.4e-21 109.4 202 35.6
MD04G1151000 Malus domestica HOM05D006287 ORTHO05D008192 1.8e-21 109.0 86 60.5
Nn3g20345 Nelumbo nucifera HOM05D006287 ORTHO05D008192 1.8e-21 109.0 135 45.2
DCAR_006447 Daucus carota HOM05D006287 ORTHO05D008192 3.1e-21 108.2 146 40.4
Thhalv10017602m.g Eutrema salsugineum HOM05D006287 ORTHO05D008192 4.1e-21 107.8 199 36.7
CARHR164980 Cardamine hirsuta HOM05D006287 ORTHO05D008192 5.3e-21 107.5 190 37.9
Carub.0005s2160 Capsella rubella HOM05D006287 ORTHO05D008192 7.0e-21 107.1 195 37.4
MSTRG.11775 Avicennia marina HOM05D006287 ORTHO05D008192 1.6e-20 105.9 136 41.2
THA.LOC104809984 Tarenaya hassleriana HOM05D006287 ORTHO05D008192 2.0e-20 105.5 224 33.5
Carub.0004s2128 Capsella rubella HOM05D006287 ORTHO05D008192 4.5e-20 104.4 202 33.7
AT3G54980 Arabidopsis thaliana HOM05D006287 ORTHO05D008192 5.9e-20 104.0 192 38.0
Sc25g0000480 Simmondsia chinensis HOM05D006287 ORTHO05D008192 5.9e-20 104.0 183 35.5
A09p47970 Brassica napus HOM05D006287 ORTHO05D008192 1.7e-19 102.4 197 35.0
SGA_v2.0_scaffold22G09931 Striga asiatica HOM05D006287 ORTHO05D008192 2.2e-19 102.1 184 32.1
AT2G39230 Arabidopsis thaliana HOM05D006287 ORTHO05D008192 2.9e-19 101.7 196 33.7
AL5G36090 Arabidopsis lyrata HOM05D006287 ORTHO05D008192 1.1e-18 99.8 192 37.5
AUR62015978 Chenopodium quinoa HOM05D006287 ORTHO05D008192 1.9e-18 99.0 208 33.2
BcaB01g00140 Brassica carinata HOM05D006287 ORTHO05D008192 3.2e-18 98.2 193 37.8
Ah.13g068920 Amaranthus hybridus HOM05D006287 ORTHO05D008192 2.1e-17 95.5 143 38.5
BraA09t40252Z Brassica rapa HOM05D006287 ORTHO05D008192 2.1e-17 95.5 195 34.4
Hund04746 Selenicereus undatus HOM05D006287 ORTHO05D008192 3.6e-17 94.7 106 42.5
Aqoxy7G02057 Aquilegia oxysepala HOM05D006287 ORTHO05D008192 8.0e-17 93.6 216 32.9
MBI08_g04815_MAGBIO Magnolia biondii HOM05D006287 ORTHO05D008192 1.0e-16 93.2 139 34.5
BcaNung04649 Brassica carinata HOM05D006287 ORTHO05D008192 3.0e-16 91.7 198 34.3
C08p30210 Brassica napus HOM05D006287 ORTHO05D008192 3.0e-16 91.7 198 34.3
BolC8t50627H Brassica oleracea HOM05D006287 ORTHO05D008192 4.0e-16 91.3 196 35.2
CDE03G0083 Ceratophyllum demersum HOM05D006287 ORTHO05D008192 8.8e-16 90.1 157 33.1
AUR62021186 Chenopodium quinoa HOM05D006287 ORTHO05D008192 4.4e-15 87.8 112 39.3
MD12G1164900 Malus domestica HOM05D006287 ORTHO05D008192 4.4e-15 87.8 86 52.3
Nitab4.5_0008089g0010 Nicotiana tabacum HOM05D006287 ORTHO05D008192 9.1e-13 80.1 79 45.6
RcHm_v2.0_Chr6g0264781 Rosa chinensis HOM05D006287 ORTHO05D008192 2.0e-12 79.0 86 50.0
DCAR_006446 Daucus carota HOM05D006287 ORTHO05D008192 2.7e-12 78.6 136 34.6
ATR0782G035 Amborella trichopoda HOM05D006287 ORTHO05D008192 4.5e-12 77.8 134 29.9
AUR62021185 Chenopodium quinoa HOM05D006287 ORTHO05D008192 7.7e-12 77.0 211 28.9
HPP92_023171 Vanilla planifolia HOM05D006287 ORTHO05D008192 2.2e-11 75.5 123 36.6
ATR0782G042 Amborella trichopoda HOM05D006287 ORTHO05D008192 8.5e-11 73.6 138 27.5
AUR62015977 Chenopodium quinoa HOM05D006287 ORTHO05D008192 3.6e-09 68.2 206 27.2
RcHm_v2.0_Chr4g0410561 Rosa chinensis HOM05D006287 ORTHO05D008192 8.0e-09 67.0 89 47.2


User provided reference genes

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