Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p039851 Quercus lobata HOM05D006439 ORTHO05D008152 0.0e+00 1908.3 976 100.0
CiPaw.09G010200 Carya illinoinensis HOM05D006439 ORTHO05D008152 0.0e+00 1425.6 981 74.0
Cfa016567 Carpinus fangiana HOM05D006439 ORTHO05D008152 0.0e+00 1399.8 973 74.4
Haze_19565 Corylus avellana HOM05D006439 ORTHO05D008152 0.0e+00 1225.7 1005 66.8
Prupe.7G115000 Prunus persica HOM05D006439 ORTHO05D008152 0.0e+00 1191.4 981 63.3
MD12G1021400 Malus domestica HOM05D006439 ORTHO05D008152 0.0e+00 1175.2 984 61.7
Gorai.007G371000 Gossypium raimondii HOM05D006439 ORTHO05D008152 0.0e+00 1156.7 984 62.0
GSVIVG01033817001 Vitis vinifera HOM05D006439 ORTHO05D008152 0.0e+00 1155.6 1021 59.9
TWI74G0883 Tripterygium wilfordii HOM05D006439 ORTHO05D008152 0.0e+00 1146.3 989 60.5
Manes.08G022900 Manihot esculenta HOM05D006439 ORTHO05D008152 0.0e+00 1146.0 986 61.4
Psat3g034720 Pisum sativum HOM05D006439 ORTHO05D008152 0.0e+00 1145.2 982 60.0
Lj1g0012097 Lotus japonicus HOM05D006439 ORTHO05D008152 0.0e+00 1139.8 985 59.9
Hma1.2p1_0232F.1_g097640 Hydrangea macrophylla HOM05D006439 ORTHO05D008152 0.0e+00 1137.9 982 60.5
Glyma.03G192900 Glycine max HOM05D006439 ORTHO05D008152 0.0e+00 1129.0 980 58.5
Lalb_Chr01g0018261 Lupinus albus HOM05D006439 ORTHO05D008152 0.0e+00 1121.3 987 59.0
FAN02G3052 Fragaria x ananassa HOM05D006439 ORTHO05D008152 0.0e+00 1109.7 1055 56.2
Phvul.001G188000 Phaseolus vulgaris HOM05D006439 ORTHO05D008152 0.0e+00 1105.5 988 58.1
TPR.G19544 Trifolium pratense HOM05D006439 ORTHO05D008152 0.0e+00 1100.1 980 58.9
arahy.Tifrunner.gnm1.ann1.YQ8CLY Arachis hypogaea HOM05D006439 ORTHO05D008152 0.0e+00 1093.6 1008 57.1
Medtr7g104170 Medicago truncatula HOM05D006439 ORTHO05D008152 0.0e+00 1092.4 985 57.8
arahy.Tifrunner.gnm1.ann1.JQB9X3 Arachis hypogaea HOM05D006439 ORTHO05D008152 0.0e+00 1092.0 1014 56.8
Gohir.A11G321900 Gossypium hirsutum HOM05D006439 ORTHO05D008152 0.0e+00 1084.7 926 61.4
Duzib093G0471 Durio zibethinus HOM05D006439 ORTHO05D008152 5.6e-309 1064.3 992 58.5
FAN14G3294 Fragaria x ananassa HOM05D006439 ORTHO05D008152 1.0e-302 1043.5 1007 56.4
Gohir.D11G340900 Gossypium hirsutum HOM05D006439 ORTHO05D008152 4.2e-296 1021.5 854 62.9
THA.LOC104823488 Tarenaya hassleriana HOM05D006439 ORTHO05D008152 5.4e-288 994.6 980 53.3
HanXRQChr09g0247281 Helianthus annuus HOM05D006439 ORTHO05D008152 1.1e-277 960.3 978 53.9
Migut.L01768 Erythranthe guttata HOM05D006439 ORTHO05D008152 3.7e-276 955.3 948 54.6
Sopen10g035010 Solanum pennellii HOM05D006439 ORTHO05D008152 1.1e-275 953.7 950 54.2
Solyc10g085600.2 Solanum lycopersicum HOM05D006439 ORTHO05D008152 2.1e-271 939.5 948 53.3
Cc06_g05440 Coffea canephora HOM05D006439 ORTHO05D008152 8.2e-268 927.5 912 54.8
RcHm_v2.0_Chr3g0472491 Rosa chinensis HOM05D006439 ORTHO05D008152 1.5e-266 923.3 764 62.6
BcaC02g07604 Brassica carinata HOM05D006439 ORTHO05D008152 3.4e-266 922.2 979 51.4
Nn2g14057 Nelumbo nucifera HOM05D006439 ORTHO05D008152 2.9e-265 919.1 985 51.5
AL4G32530 Arabidopsis lyrata HOM05D006439 ORTHO05D008152 8.4e-265 917.5 978 50.7
AT2G36370 Arabidopsis thaliana HOM05D006439 ORTHO05D008152 8.4e-265 917.5 987 50.5
BolC4t28018H Brassica oleracea HOM05D006439 ORTHO05D008152 1.3e-262 910.2 983 51.0
ECA233G3232 Erigeron canadensis HOM05D006439 ORTHO05D008152 1.3e-262 910.2 946 52.3
BcaB06g28933 Brassica carinata HOM05D006439 ORTHO05D008152 1.5e-261 906.7 1007 49.5
Thhalv10017885m.g Eutrema salsugineum HOM05D006439 ORTHO05D008152 1.4e-259 900.2 917 53.2
A04p27880 Brassica napus HOM05D006439 ORTHO05D008152 4.1e-259 898.7 912 53.0
BraA04t18280Z Brassica rapa HOM05D006439 ORTHO05D008152 5.9e-258 894.8 912 52.0
PSO384G3820 Papaver somniferum HOM05D006439 ORTHO05D008152 1.0e-257 894.0 947 51.6
CARHR130670 Cardamine hirsuta HOM05D006439 ORTHO05D008152 8.5e-257 891.0 941 51.1
Lsat_1_v5_gn_6_69500 Lactuca sativa HOM05D006439 ORTHO05D008152 5.7e-253 878.2 983 49.9
Ciclev10011131m.g Citrus clementina HOM05D006439 ORTHO05D008152 2.9e-249 865.9 764 60.7
Actinidia31281 Actinidia chinensis HOM05D006439 ORTHO05D008152 5.0e-249 865.1 849 54.1
Peaxi162Scf00146g00718 Petunia axillaris HOM05D006439 ORTHO05D008152 6.5e-249 864.8 935 51.0
SGA_v2.0_scaffold184G39949 Striga asiatica HOM05D006439 ORTHO05D008152 4.2e-248 862.1 1063 47.1
Sc07g0005420 Simmondsia chinensis HOM05D006439 ORTHO05D008152 5.7e-245 851.7 865 52.6
Aa31LG5G21550 Aethionema arabicum HOM05D006439 ORTHO05D008152 2.0e-242 843.2 980 48.4
Ca_08981_v3 Cicer arietinum L. HOM05D006439 ORTHO05D008152 1.1e-240 837.4 799 55.7
Oeu034357.1 Olea europaea HOM05D006439 ORTHO05D008152 3.6e-239 832.4 1015 48.2
Cpa.g.sc5.59 Carica papaya HOM05D006439 ORTHO05D008152 1.1e-235 820.8 957 50.6
FvH4_6g18170 Fragaria vesca HOM05D006439 ORTHO05D008152 2.6e-234 816.2 982 47.6
Thecc.05G084500 Theobroma cacao HOM05D006439 ORTHO05D008152 3.6e-231 805.8 654 65.6
EL10Ac7g16960 Beta vulgaris HOM05D006439 ORTHO05D008152 3.8e-225 785.8 899 49.6
Sp4g18660 Schrenkiella parvula HOM05D006439 ORTHO05D008152 9.8e-221 771.2 796 52.9
VMungo1383G0775 Vigna mungo HOM05D006439 ORTHO05D008152 1.1e-219 767.7 671 61.1
QL11p044009 Quercus lobata HOM05D006439 ORTHO05D009270 4.0e-214 749.2 571 74.6
SalBow5G0766 Salvia bowleyana HOM05D006439 ORTHO05D008152 8.6e-209 731.5 807 51.2
CAN.G1099.9 Capsicum annuum HOM05D006439 ORTHO05D008152 3.6e-207 726.1 762 52.8
AUR62028585 Chenopodium quinoa HOM05D006439 ORTHO05D008152 1.2e-205 721.1 911 44.7
PGR142G3529 Punica granatum HOM05D006439 ORTHO05D008152 3.5e-202 709.5 849 49.1
vmacro08831 Vaccinium macrocarpon HOM05D006439 ORTHO05D008152 6.0e-194 682.2 656 56.4
Ah.15g091040 Amaranthus hybridus HOM05D006439 ORTHO05D008152 4.7e-191 672.5 839 46.7
Os01g0968600 Oryza sativa ssp. japonica HOM05D006439 ORTHO05D008152 3.2e-187 659.8 937 41.8
Nitab4.5_0000381g0240 Nicotiana tabacum HOM05D006439 ORTHO05D008152 8.6e-185 651.7 844 45.9
DCAR_009146 Daucus carota HOM05D006439 ORTHO05D008152 1.4e-182 644.4 857 44.6
Aqoxy2G01352 Aquilegia oxysepala HOM05D006439 ORTHO05D008152 3.1e-182 643.3 670 53.6
Atru.chr8.1601 Acer truncatum HOM05D006439 ORTHO05D008152 3.5e-178 629.8 484 67.8
HPP92_005462 Vanilla planifolia HOM05D006439 ORTHO05D008152 8.4e-172 608.6 951 40.3
Atru.chr8.1600 Acer truncatum HOM05D006439 ORTHO05D008152 7.8e-170 602.1 498 61.2
TAR623G1631 Trochodendron aralioides HOM05D006439 ORTHO05D008152 4.2e-155 553.1 544 58.3
PSO801G0048 Papaver somniferum HOM05D006439 ORTHO05D008152 5.0e-140 503.1 791 40.5
Dinv21235 Davidia involucrata HOM05D000103 ORTHO05D008152 8.5e-140 502.3 423 63.6
Dinv21234 Davidia involucrata HOM05D006439 ORTHO05D008152 1.4e-139 501.5 431 58.5
Carub.0004s1817 Capsella rubella HOM05D006439 ORTHO05D008152 9.1e-134 482.3 480 55.2
Rhsim04G0133900 Rhododendron simsii HOM05D006439 ORTHO05D008152 2.6e-120 437.6 337 66.5
Zm00001eb139990 Zea mays HOM05D006439 ORTHO05D008152 1.3e-111 408.7 610 40.7
CSS0038647 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 1.3e-108 398.7 283 69.6
Carub.0004s1816 Capsella rubella HOM05D006439 ORTHO05D008152 4.9e-103 380.2 422 48.8
MBI17_g23163_MAGBIO Magnolia biondii HOM05D006439 ORTHO05D008152 6.6e-100 369.8 821 35.2
Pp3c16_1040 Physcomitrium patens HOM05D006439 ORTHO05D008152 1.2e-96 359.0 946 29.7
Nitab4.5_0005447g0020 Nicotiana tabacum HOM05D006439 ORTHO05D008152 1.8e-89 335.1 511 39.9
QL07p039868 Quercus lobata HOM05D006439 ORTHO05D008152 2.6e-80 304.7 198 82.8
Lj3A1001T30 Lonicera japonica HOM05D006439 ORTHO05D008152 4.1e-78 297.4 248 64.5
AagrBONN_evm.TU.Sc2ySwM_117.1948 Anthoceros agrestis HOM05D006439 ORTHO05D008152 2.0e-72 278.5 922 28.0
Mapoly0116s0006 Marchantia polymorpha HOM05D006439 ORTHO05D008152 9.9e-72 276.2 953 27.3
Lj3A1001T29 Lonicera japonica HOM05D006439 ORTHO05D008152 1.4e-70 272.3 324 50.9
VMungo1383G1144 Vigna mungo HOM05D006439 ORTHO05D008152 6.0e-69 266.9 254 52.0
RcHm_v2.0_Chr3g0472501 Rosa chinensis HOM05D006439 ORTHO05D008152 1.0e-68 266.2 183 69.4
SMO238G0046 Selaginella moellendorffii HOM05D006439 ORTHO05D008152 8.9e-65 253.1 886 26.1
Ciclev10013912m.g Citrus clementina HOM05D006439 ORTHO05D008152 1.6e-61 242.3 171 70.2
Lj3A1001G26 Lonicera japonica HOM05D006439 ORTHO05D008152 1.9e-59 235.3 202 56.9
PGSC0003DMG402008399 Solanum tuberosum HOM05D006439 ORTHO05D008152 1.4e-54 219.2 172 62.2
SEGI_26522 Sequoiadendron giganteum HOM05D006439 ORTHO05D000001 6.7e-44 183.7 238 45.4
VMungo1127G2301 Vigna mungo HOM05D006439 ORTHO05D008152 1.3e-42 179.5 223 47.1
Aqoxy2G01351 Aquilegia oxysepala HOM05D006439 ORTHO05D008152 5.8e-40 170.6 204 44.1
CSS0030357 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 3.8e-39 167.9 172 55.8
CAN.G1099.8 Capsicum annuum HOM05D006439 ORTHO05D008152 3.3e-35 154.8 127 59.1
TAR623G0848 Trochodendron aralioides HOM05D006439 ORTHO05D008152 3.3e-35 154.8 105 65.7
Nitab4.5_0000381g0270 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.7e-34 151.4 122 59.0
SEGI_31112 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 3.1e-33 148.3 318 34.6
FAN09G3024 Fragaria x ananassa HOM05D006439 ORTHO05D008152 1.0e-31 143.3 157 49.7
AL4G34520 Arabidopsis lyrata HOM05D006439 ORTHO05D008152 3.5e-29 134.8 233 35.6
Lj3A1001T31 Lonicera japonica HOM05D006439 ORTHO05D008152 1.5e-27 129.4 96 63.5
SEGI_37059 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 1.9e-27 129.0 136 50.0
AUR62028586 Chenopodium quinoa HOM05D006439 ORTHO05D008152 5.7e-27 127.5 95 64.2
Thecc.10G111400 Theobroma cacao HOM05D006439 ORTHO05D008152 9.4e-22 110.2 76 71.1
CSS0006664 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 9.1e-17 93.6 93 53.8
AUR62033535 Chenopodium quinoa HOM05D006439 ORTHO05D008152 2.9e-15 88.6 70 60.0
SEGI_02684 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 1.9e-14 85.9 101 44.6
AL4G34560 Arabidopsis lyrata HOM05D006439 ORTHO05D008152 3.2e-14 85.1 110 43.6
QL11p043997 Quercus lobata HOM05D006439 ORTHO05D008152 7.9e-13 80.5 64 65.6
CSS0035414 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 1.4e-12 79.7 83 48.2
SEGI_31670 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 6.7e-12 77.4 86 46.5
Lj1g0014420 Lotus japonicus HOM05D006439 ORTHO05D046803 1.3e-10 73.2 83 50.6
Psat6g076200 Pisum sativum HOM05D006439 ORTHO05D008152 3.7e-10 71.6 47 63.8
Glyma.19G193000 Glycine max HOM05D006439 ORTHO05D046803 1.4e-09 69.7 81 48.1
ECA232G2349 Erigeron canadensis HOM05D006439 ORTHO05D008321 2.4e-09 68.9 255 27.8
Lj1g0023385 Lotus japonicus HOM05D006439 ORTHO05D008152 1.2e-08 66.6 90 43.3
CSS0045256 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 7.7e-08 63.9 53 58.5
Lalb_Chr01g0012921 Lupinus albus HOM05D001219 ORTHO05D001017 1.3e-07 63.2 406 21.7
Nn8g39731 Nelumbo nucifera HOM05D001219 ORTHO05D001017 1.1e-06 60.1 411 24.3
Medtr4g006240 Medicago truncatula HOM05D001219 ORTHO05D001017 1.5e-06 59.7 457 21.4
Duzib093G1543 Durio zibethinus HOM05D002125 ORTHO05D002105 1.9e-06 59.3 89 34.8
arahy.Tifrunner.gnm1.ann1.JW8Z9M Arachis hypogaea HOM05D001219 ORTHO05D001017 3.2e-06 58.5 439 21.2
Gohir.A01G230200 Gossypium hirsutum HOM05D002125 ORTHO05D002105 9.4e-06 57.0 89 33.7


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