Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p036167 Quercus lobata HOM05D005750 ORTHO05D007126 4.8e-146 521.5 348 100.0
CiPaw.09G205200 Carya illinoinensis HOM05D005750 ORTHO05D007126 2.5e-126 456.1 280 83.2
arahy.Tifrunner.gnm1.ann1.CU0EG8 Arachis hypogaea HOM05D005750 ORTHO05D007126 8.5e-119 431.0 276 79.0
Gohir.A01G224900 Gossypium hirsutum HOM05D005750 ORTHO05D007126 1.1e-118 430.6 280 78.6
Gohir.D01G214500 Gossypium hirsutum HOM05D005750 ORTHO05D007126 1.1e-118 430.6 280 78.6
Duzib128G1738 Durio zibethinus HOM05D005750 ORTHO05D007126 1.9e-118 429.9 277 78.7
Lalb_Chr07g0193351 Lupinus albus HOM05D005750 ORTHO05D007126 1.9e-118 429.9 276 79.3
Gorai.002G260600 Gossypium raimondii HOM05D005750 ORTHO05D007126 5.5e-118 428.3 280 78.2
Phvul.010G008000 Phaseolus vulgaris HOM05D005750 ORTHO05D007126 7.2e-118 427.9 277 78.7
Prupe.6G269800 Prunus persica HOM05D005750 ORTHO05D007126 9.4e-118 427.6 271 80.1
Lj3g0021719 Lotus japonicus HOM05D005750 ORTHO05D007126 1.2e-117 427.2 277 79.4
VMungo0331G1407 Vigna mungo HOM05D005750 ORTHO05D007126 1.2e-117 427.2 276 78.3
ClCG10G021760 Citrullus lanatus HOM05D005750 ORTHO05D007126 1.6e-117 426.8 276 79.3
Glyma.01G110900 Glycine max HOM05D005750 ORTHO05D007126 1.6e-117 426.8 276 79.0
FvH4_6g12170 Fragaria vesca HOM05D005750 ORTHO05D007126 2.7e-117 426.0 275 78.5
FAN02G3889 Fragaria x ananassa HOM05D005750 ORTHO05D007126 2.7e-117 426.0 275 78.5
FAN09G4178 Fragaria x ananassa HOM05D005750 ORTHO05D007126 2.7e-117 426.0 275 78.5
FAN14G0046 Fragaria x ananassa HOM05D005750 ORTHO05D007126 6.1e-117 424.9 275 78.2
FAN14G1750 Fragaria x ananassa HOM05D005750 ORTHO05D007126 6.1e-117 424.9 275 78.2
MD04G1146200 Malus domestica HOM05D005750 ORTHO05D007126 8.0e-117 424.5 271 79.0
CsaV3_3G034210 Cucumis sativus L. HOM05D005750 ORTHO05D007126 1.0e-116 424.1 276 79.0
MELO3C009196.2 Cucumis melo HOM05D005750 ORTHO05D007126 2.3e-116 422.9 276 78.6
Ciclev10012396m.g Citrus clementina HOM05D005750 ORTHO05D007126 3.0e-116 422.5 276 76.4
Dinv35517 Davidia involucrata HOM05D005750 ORTHO05D007126 3.0e-116 422.5 276 77.9
Duzib093G0788 Durio zibethinus HOM05D005750 ORTHO05D007126 3.0e-116 422.5 278 77.3
Actinidia13787 Actinidia chinensis HOM05D005750 ORTHO05D007126 2.6e-115 419.5 268 78.7
arahy.Tifrunner.gnm1.ann1.2Q187C Arachis hypogaea HOM05D005750 ORTHO05D007126 2.6e-115 419.5 276 77.9
RcHm_v2.0_Chr3g0463971 Rosa chinensis HOM05D005750 ORTHO05D007126 2.6e-115 419.5 272 79.0
COL.COLO4_14617 Corchorus olitorius HOM05D005750 ORTHO05D007126 5.7e-115 418.3 299 76.9
MD12G1159400 Malus domestica HOM05D005750 ORTHO05D007126 1.3e-114 417.2 276 76.8
Sed0027096 Sechium edule HOM05D005750 ORTHO05D007126 1.7e-114 416.8 270 79.6
TPR.G5219 Trifolium pratense HOM05D005750 ORTHO05D007126 1.7e-114 416.8 275 78.2
Cpa.g.sc56.104 Carica papaya HOM05D005750 ORTHO05D007126 2.8e-114 416.0 276 76.8
Thecc.05G023200 Theobroma cacao HOM05D005750 ORTHO05D007126 2.4e-113 412.9 276 77.9
CANSAT35G0049 Cannabis sativa HOM05D005750 ORTHO05D007126 4.1e-113 412.1 277 76.9
PGR031G0365 Punica granatum HOM05D005750 ORTHO05D007126 9.2e-113 411.0 274 78.5
Glyma.03G076500 Glycine max HOM05D005750 ORTHO05D007126 2.0e-112 409.8 290 73.8
Potri.016G110300 Populus trichocarpa HOM05D005750 ORTHO05D007126 4.5e-112 408.7 277 75.8
vmacro20231 Vaccinium macrocarpon HOM05D005750 ORTHO05D007126 5.9e-112 408.3 272 76.5
Dinv37089 Davidia involucrata HOM05D005750 ORTHO05D007126 2.3e-111 406.4 276 75.4
Atru.chr8.2137 Acer truncatum HOM05D005750 ORTHO05D007126 5.0e-111 405.2 276 76.1
Manes.09G101500 Manihot esculenta HOM05D005750 ORTHO05D007126 1.9e-110 403.3 276 75.4
Eucgr.B02764 Eucalyptus grandis HOM05D005750 ORTHO05D007126 7.3e-110 401.4 277 75.1
Nitab4.5_0000119g0240 Nicotiana tabacum HOM05D005750 ORTHO05D007126 7.3e-110 401.4 274 74.5
CSS0046643 Camellia sinensis var. sinensis HOM05D005750 ORTHO05D007126 9.5e-110 401.0 272 75.0
DCAR_028833 Daucus carota HOM05D005750 ORTHO05D007126 1.2e-109 400.6 274 75.2
Aqoxy1G00732 Aquilegia oxysepala HOM05D005750 ORTHO05D007126 1.6e-109 400.2 276 74.6
Lj2A78G34 Lonicera japonica HOM05D005750 ORTHO05D007126 1.6e-109 400.2 276 74.6
Haze_20940 Corylus avellana HOM05D005750 ORTHO05D007126 2.1e-109 399.8 271 75.6
Medtr4g014710 Medicago truncatula HOM05D005750 ORTHO05D007126 3.6e-109 399.1 272 76.8
MBI14_g32934_MAGBIO Magnolia biondii HOM05D005750 ORTHO05D007126 4.7e-109 398.7 270 74.8
Psat7g247000 Pisum sativum HOM05D005750 ORTHO05D007126 4.7e-109 398.7 277 74.7
TWI74G1070 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 3.4e-107 392.5 277 73.6
Peaxi162Scf00014g00091 Petunia axillaris HOM05D005750 ORTHO05D007126 7.5e-107 391.3 275 72.4
TAR623G1708 Trochodendron aralioides HOM05D005750 ORTHO05D007126 9.8e-107 391.0 279 71.3
GSVIVG01034019001 Vitis vinifera HOM05D005750 ORTHO05D007126 9.8e-107 391.0 276 72.5
TWI53G0977 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 2.2e-106 389.8 277 74.4
Cc06_g01740 Coffea canephora HOM05D005750 ORTHO05D007126 6.4e-106 388.3 277 72.6
Sopen10g036170 Solanum pennellii HOM05D005750 ORTHO05D007126 1.4e-105 387.1 274 71.9
MSTRG.26795 Avicennia marina HOM05D005750 ORTHO05D007126 2.4e-105 386.3 273 72.9
CAN.G351.8 Capsicum annuum HOM05D005750 ORTHO05D007126 2.4e-105 386.3 275 71.6
Ah.11g045300 Amaranthus hybridus HOM05D005750 ORTHO05D007126 3.2e-105 386.0 278 71.9
TAR636G2178 Trochodendron aralioides HOM05D005750 ORTHO05D007126 7.0e-105 384.8 279 71.7
EL10Ac5g11550 Beta vulgaris HOM05D005750 ORTHO05D007126 9.2e-105 384.4 276 73.6
THA.LOC104823389 Tarenaya hassleriana HOM05D005750 ORTHO05D007126 9.2e-105 384.4 277 71.1
Hund15288 Selenicereus undatus HOM05D005750 ORTHO05D007126 3.5e-104 382.5 277 71.5
Sabra16G0106800 Salix brachista HOM05D005750 ORTHO05D007126 2.3e-103 379.8 290 70.0
Sed0026182 Sechium edule HOM05D005750 ORTHO05D007126 2.3e-103 379.8 280 71.4
Sc01g0006740 Simmondsia chinensis HOM05D005750 ORTHO05D007126 8.6e-103 377.9 276 70.7
Sabra06G0073600 Salix brachista HOM05D005750 ORTHO05D007126 1.5e-102 377.1 318 63.8
AUR62042943 Chenopodium quinoa HOM05D005750 ORTHO05D007126 4.3e-102 375.6 272 72.4
Migut.J00232 Erythranthe guttata HOM05D005750 ORTHO05D007126 7.3e-102 374.8 259 73.4
Aa31sc171G20 Aethionema arabicum HOM05D005750 ORTHO05D007126 2.1e-101 373.2 278 69.8
Lsat_1_v5_gn_8_99481 Lactuca sativa HOM05D005750 ORTHO05D007126 3.6e-101 372.5 237 79.3
unitig_46.g18409 Utricularia gibba HOM05D005750 ORTHO05D007126 1.0e-100 370.9 267 72.3
Rhsim05G0204700 Rhododendron simsii HOM05D005750 ORTHO05D007126 1.4e-100 370.5 300 65.7
Thhalv10010608m.g Eutrema salsugineum HOM05D005750 ORTHO05D007126 3.1e-100 369.4 281 69.4
PSO384G4196 Papaver somniferum HOM05D005750 ORTHO05D007126 8.9e-100 367.9 278 69.4
Carub.0005s2072 Capsella rubella HOM05D005750 ORTHO05D007126 1.5e-99 367.1 281 69.4
AL5G35150 Arabidopsis lyrata HOM05D005750 ORTHO05D007126 2.0e-99 366.7 282 69.5
CDE02G4717 Ceratophyllum demersum HOM05D005750 ORTHO05D007126 2.0e-99 366.7 274 68.2
Oeu004613.2 Olea europaea HOM05D005750 ORTHO05D007126 2.0e-99 366.7 301 64.1
C04p38380 Brassica napus HOM05D005750 ORTHO05D007126 4.4e-99 365.5 282 68.8
BolC4t25415H Brassica oleracea HOM05D005750 ORTHO05D007126 7.5e-99 364.8 282 68.8
Potri.006G095700 Populus trichocarpa HOM05D005750 ORTHO05D007126 7.5e-99 364.8 244 74.6
CARHR164010 Cardamine hirsuta HOM05D005750 ORTHO05D007126 1.3e-98 364.0 282 68.4
AT3G54130 Arabidopsis thaliana HOM05D005750 ORTHO05D007126 1.7e-98 363.6 279 69.5
HanXRQChr16g0510541 Helianthus annuus HOM05D005750 ORTHO05D007126 1.7e-98 363.6 225 79.6
Hma1.2p1_0763F.1_g214560 Hydrangea macrophylla HOM05D005750 ORTHO05D007126 1.7e-98 363.6 277 68.2
A04p05670 Brassica napus HOM05D005750 ORTHO05D007126 2.2e-98 363.2 284 68.0
BcaC02g09095 Brassica carinata HOM05D005750 ORTHO05D007126 2.9e-98 362.8 282 67.7
PSO339G6575 Papaver somniferum HOM05D005750 ORTHO05D007126 6.4e-98 361.7 278 68.7
A09p47130 Brassica napus HOM05D005750 ORTHO05D007126 1.4e-97 360.5 282 67.7
BraA09t40175Z Brassica rapa HOM05D005750 ORTHO05D007126 1.4e-97 360.5 282 67.7
Sp5g08260 Schrenkiella parvula HOM05D005750 ORTHO05D007126 1.4e-97 360.5 277 68.6
C08p29390 Brassica napus HOM05D005750 ORTHO05D007126 2.4e-97 359.8 282 67.4
BolC8t50540H Brassica oleracea HOM05D005750 ORTHO05D007126 2.4e-97 359.8 282 67.4
BraA04t16263Z Brassica rapa HOM05D005750 ORTHO05D007126 3.2e-97 359.4 284 67.3
BcaB02g08472 Brassica carinata HOM05D005750 ORTHO05D007126 7.8e-96 354.8 282 66.3
CiPaw.10G154000 Carya illinoinensis HOM05D005750 ORTHO05D007126 1.6e-93 347.1 269 69.9
SGA_v2.0_scaffold240G44116 Striga asiatica HOM05D005750 ORTHO05D007126 4.0e-92 342.4 269 65.8
Os01g0851400 Oryza sativa ssp. japonica HOM05D005750 ORTHO05D007126 5.2e-92 342.0 268 66.0
Zm00001eb367490 Zea mays HOM05D005750 ORTHO05D007126 2.6e-91 339.7 271 64.2
Zm00001eb147810 Zea mays HOM05D005750 ORTHO05D007126 1.3e-90 337.4 278 62.6
BcaB01g00216 Brassica carinata HOM05D005750 ORTHO05D007126 6.4e-90 335.1 219 74.0
SEGI_00199 Sequoiadendron giganteum HOM05D005750 ORTHO05D007126 3.6e-85 319.3 270 59.3
Actinidia29137 Actinidia chinensis HOM05D005750 ORTHO05D007126 2.3e-84 316.6 230 71.7
Gohir.D04G128250 Gossypium hirsutum HOM05D005750 ORTHO05D007126 3.4e-83 312.8 260 63.8
Ca_23809_v3 Cicer arietinum L. HOM05D005750 ORTHO05D007126 3.0e-79 299.7 180 81.7
Gorai.012G111300 Gossypium raimondii HOM05D005750 ORTHO05D007126 8.6e-79 298.1 260 61.9
ECA236G1744 Erigeron canadensis HOM05D005750 ORTHO05D007126 4.4e-75 285.8 191 75.9
Nn2g13588 Nelumbo nucifera HOM05D005750 ORTHO05D007126 2.2e-74 283.5 180 77.8
TPR.G5190 Trifolium pratense HOM05D005750 ORTHO05D007126 2.7e-72 276.6 238 59.7
HPP92_018186 Vanilla planifolia HOM05D005750 ORTHO05D007126 2.3e-71 273.5 272 54.8
PGSC0003DMG400019130 Solanum tuberosum HOM05D005750 ORTHO05D007126 6.6e-71 271.9 176 76.1
SGA_v2.0_scaffold85G26769 Striga asiatica HOM05D005750 ORTHO05D007126 1.5e-70 270.8 212 65.1
Solyc10g086770.3 Solanum lycopersicum HOM05D005750 ORTHO05D007126 5.3e-68 262.3 176 73.3
AUR62025787 Chenopodium quinoa HOM05D005750 ORTHO05D007126 7.1e-65 251.9 175 74.9
CBR_g865 Chara braunii HOM05D005750 ORTHO05D007126 2.6e-59 233.4 287 43.9
Pp3c7_8520 Physcomitrium patens HOM05D005750 ORTHO05D007126 5.8e-59 232.3 266 46.2
AagrBONN_evm.TU.Sc2ySwM_344.3267 Anthoceros agrestis HOM05D005750 ORTHO05D007126 1.4e-57 227.6 220 53.6
Nitab4.5_0006439g0020 Nicotiana tabacum HOM05D005750 ORTHO05D007126 4.9e-50 202.6 274 47.4
SMO203G0145 Selaginella moellendorffii HOM05D005750 ORTHO05D007126 3.3e-46 189.9 181 53.6
Cre11.g475450 Chlamydomonas reinhardtii HOM05D005750 ORTHO05D007126 1.7e-42 177.6 211 45.0
TAR636G1840 Trochodendron aralioides HOM05D005750 ORTHO05D007126 7.2e-41 172.2 180 54.4
MCO10G202 Micromonas commoda HOM05D005750 ORTHO05D007126 1.7e-34 151.0 294 33.3
TAR402G0002 Trochodendron aralioides HOM05D005750 ORTHO05D007126 2.4e-28 130.6 101 70.3
Ca_23812_v3 Cicer arietinum L. HOM05D005750 ORTHO05D007126 1.0e-26 125.2 96 70.8
PRCOL_00002333 Prasinoderma coloniale HOM05D005750 ORTHO05D007126 8.5e-26 122.1 288 31.6
Haze_26299 Corylus avellana HOM05D005750 ORTHO05D007126 7.2e-25 119.0 184 36.4
Nn2g11345 Nelumbo nucifera HOM05D005750 ORTHO05D007126 6.7e-23 112.5 54 98.1
ATR0618G451 Amborella trichopoda HOM05D005750 ORTHO05D007126 2.8e-21 107.1 54 92.6
A04p05660 Brassica napus HOM05D005750 ORTHO05D007126 4.5e-19 99.8 52 88.5
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 5.7e-06 56.2 171 28.7
FvH4_5g19731 Fragaria vesca HOM05D005750 ORTHO05D035649 7.5e-06 55.8 67 52.2


User provided reference genes

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