Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p026057 Quercus lobata HOM05D004834 ORTHO05D006247 1.5e-98 362.8 180 100.0
QL07p026110 Quercus lobata HOM05D004834 ORTHO05D006247 2.5e-74 282.3 157 92.4
Haze_20096 Corylus avellana HOM05D004834 ORTHO05D006247 6.7e-59 231.1 157 78.3
CiPaw.09G024600 Carya illinoinensis HOM05D004834 ORTHO05D006247 2.2e-49 199.5 155 71.6
Ciclev10011373m.g Citrus clementina HOM05D004834 ORTHO05D006247 4.7e-44 181.8 159 64.2
GSVIVG01022507001 Vitis vinifera HOM05D004834 ORTHO05D006247 1.4e-43 180.3 155 63.2
Dinv11906 Davidia involucrata HOM05D004834 ORTHO05D006247 1.8e-43 179.9 171 60.8
CSS0012663 Camellia sinensis var. sinensis HOM05D004834 ORTHO05D006247 3.0e-43 179.1 173 60.7
CSS0029343 Camellia sinensis var. sinensis HOM05D004834 ORTHO05D006247 1.7e-41 173.3 173 59.0
Phvul.001G199000 Phaseolus vulgaris HOM05D004834 ORTHO05D006247 6.3e-41 171.4 154 62.3
Manes.09G041400 Manihot esculenta HOM05D004834 ORTHO05D006247 8.2e-41 171.0 158 60.8
Gohir.D09G128200 Gossypium hirsutum HOM05D004834 ORTHO05D006247 2.4e-40 169.5 177 57.6
Gorai.006G146800 Gossypium raimondii HOM05D004834 ORTHO05D006247 2.4e-40 169.5 177 57.6
Hma1.2p1_0304F.1_g119280 Hydrangea macrophylla HOM05D004834 ORTHO05D006247 1.2e-39 167.2 174 56.9
Atru.chr8.1261 Acer truncatum HOM05D004834 ORTHO05D006247 5.9e-39 164.9 156 61.5
Ca_09087_v3 Cicer arietinum L. HOM05D004834 ORTHO05D006247 1.0e-38 164.1 171 55.0
TWI53G0913 Tripterygium wilfordii HOM05D004834 ORTHO05D006247 1.3e-38 163.7 159 63.5
Dinv25086 Davidia involucrata HOM05D004834 ORTHO05D006247 1.7e-38 163.3 163 59.5
Gohir.A09G131900 Gossypium hirsutum HOM05D004834 ORTHO05D006247 1.7e-38 163.3 174 56.9
Rhsim03G0058000 Rhododendron simsii HOM05D004834 ORTHO05D006247 1.7e-38 163.3 156 58.3
COL.COLO4_29472 Corchorus olitorius HOM05D004834 ORTHO05D006247 2.2e-38 162.9 176 56.2
Nn2g14430 Nelumbo nucifera HOM05D004834 ORTHO05D006247 2.9e-38 162.5 173 53.8
TAR633G1355 Trochodendron aralioides HOM05D004834 ORTHO05D006247 2.9e-38 162.5 169 55.0
Potri.016G064800 Populus trichocarpa HOM05D004834 ORTHO05D006247 5.0e-38 161.8 162 61.1
TAR636G2709 Trochodendron aralioides HOM05D004834 ORTHO05D006247 8.5e-38 161.0 169 53.8
CANSAT64G2176 Cannabis sativa HOM05D004834 ORTHO05D006247 1.9e-37 159.8 167 57.5
EL10Ac5g11795 Beta vulgaris HOM05D004834 ORTHO05D006247 9.4e-37 157.5 169 53.8
Prupe.7G088800 Prunus persica HOM05D004834 ORTHO05D006247 2.1e-36 156.4 159 59.7
VMungo1383G2386 Vigna mungo HOM05D004834 ORTHO05D006247 2.1e-36 156.4 154 57.8
Cpa.g.sc222.7 Carica papaya HOM05D004834 ORTHO05D006247 2.7e-36 156.0 170 55.3
Psat3g026160 Pisum sativum HOM05D004834 ORTHO05D006247 2.7e-36 156.0 154 56.5
Lj1g0003379 Lotus japonicus HOM05D004834 ORTHO05D006247 4.7e-36 155.2 168 54.2
Sabra16G0066600 Salix brachista HOM05D004834 ORTHO05D006247 8.0e-36 154.5 158 58.9
AUR62038413 Chenopodium quinoa HOM05D004834 ORTHO05D006247 1.4e-35 153.7 171 53.8
Medtr7g107050 Medicago truncatula HOM05D004834 ORTHO05D006247 1.8e-35 153.3 174 50.0
Thecc.05G183400 Theobroma cacao HOM05D004834 ORTHO05D006247 2.3e-35 152.9 178 54.5
Prupe.7G088900 Prunus persica HOM05D004834 ORTHO05D006247 8.8e-35 151.0 160 58.1
vmacro07522 Vaccinium macrocarpon HOM05D004834 ORTHO05D006247 8.8e-35 151.0 158 54.4
Glyma.03G205500 Glycine max HOM05D004834 ORTHO05D006247 2.0e-34 149.8 170 52.9
PGSC0003DMG401008663 Solanum tuberosum HOM05D004834 ORTHO05D006247 2.6e-34 149.4 172 53.5
PGSC0003DMG403008663 Solanum tuberosum HOM05D004834 ORTHO05D006247 2.6e-34 149.4 172 53.5
Lsat_1_v5_gn_2_102000 Lactuca sativa HOM05D004834 ORTHO05D006247 3.4e-34 149.1 175 51.4
Rhsim03G0058100 Rhododendron simsii HOM05D004834 ORTHO05D006247 9.8e-34 147.5 179 50.3
AUR62036303 Chenopodium quinoa HOM05D004834 ORTHO05D006247 1.7e-33 146.7 189 47.6
Eucgr.A02536 Eucalyptus grandis HOM05D004834 ORTHO05D006247 1.7e-33 146.7 182 49.5
MELO3C009581.2 Cucumis melo HOM05D004834 ORTHO05D006247 2.2e-33 146.4 162 53.1
Lalb_Chr20g0111191 Lupinus albus HOM05D004834 ORTHO05D006247 2.2e-33 146.4 153 58.2
arahy.Tifrunner.gnm1.ann1.5D1JVS Arachis hypogaea HOM05D004834 ORTHO05D006247 2.8e-33 146.0 168 52.4
CANSAT64G0017 Cannabis sativa HOM05D004834 ORTHO05D006247 2.8e-33 146.0 165 54.5
Sopen11g020840 Solanum pennellii HOM05D004834 ORTHO05D006247 4.8e-33 145.2 173 53.8
Ah.02g115150 Amaranthus hybridus HOM05D004834 ORTHO05D006247 6.3e-33 144.8 156 54.5
RcHm_v2.0_Chr3g0477531 Rosa chinensis HOM05D004834 ORTHO05D006247 6.3e-33 144.8 156 54.5
ECA238G0502 Erigeron canadensis HOM05D004834 ORTHO05D006247 8.3e-33 144.4 177 51.4
Solyc11g045370.1 Solanum lycopersicum HOM05D004834 ORTHO05D006247 8.3e-33 144.4 173 53.8
Cc06_g07030 Coffea canephora HOM05D004834 ORTHO05D006247 1.4e-32 143.7 177 49.2
Migut.J00722 Erythranthe guttata HOM05D004834 ORTHO05D006247 1.4e-32 143.7 166 54.2
TPR.G14400 Trifolium pratense HOM05D004834 ORTHO05D006247 1.4e-32 143.7 168 51.8
MD12G1046700 Malus domestica HOM05D004834 ORTHO05D006247 3.1e-32 142.5 159 52.8
Aqoxy1G00576 Aquilegia oxysepala HOM05D004834 ORTHO05D006247 4.1e-32 142.1 184 48.4
arahy.Tifrunner.gnm1.ann1.5D1K5R Arachis hypogaea HOM05D004834 ORTHO05D006247 5.4e-32 141.7 168 51.2
DCAR_013465 Daucus carota HOM05D004834 ORTHO05D006247 7.0e-32 141.4 151 51.0
HanXRQChr14g0453201 Helianthus annuus HOM05D004834 ORTHO05D006247 1.2e-31 140.6 172 51.2
Sed0002421 Sechium edule HOM05D004834 ORTHO05D006247 1.2e-31 140.6 162 51.9
THA.LOC104799266 Tarenaya hassleriana HOM05D004834 ORTHO05D006247 1.2e-31 140.6 163 56.4
Peaxi162Scf00210g00225 Petunia axillaris HOM05D004834 ORTHO05D006247 2.0e-31 139.8 155 57.4
SalBow1G1939 Salvia bowleyana HOM05D004834 ORTHO05D006247 2.7e-31 139.4 177 49.7
SGA_v2.0_scaffold112G31558 Striga asiatica HOM05D004834 ORTHO05D006247 3.5e-31 139.0 173 48.6
Sp6g36280 Schrenkiella parvula HOM05D004834 ORTHO05D006247 7.7e-31 137.9 176 51.7
MD12G1046600 Malus domestica HOM05D004834 ORTHO05D006247 1.3e-30 137.1 154 53.2
Sc01g0005240 Simmondsia chinensis HOM05D004834 ORTHO05D006247 2.9e-30 136.0 160 51.2
MSTRG.19322 Avicennia marina HOM05D004834 ORTHO05D006247 1.1e-29 134.0 177 48.0
PSO339G5030 Papaver somniferum HOM05D004834 ORTHO05D006247 1.5e-29 133.7 183 48.1
FvH4_6g21120 Fragaria vesca HOM05D004834 ORTHO05D006247 5.5e-29 131.7 156 53.2
Nitab4.5_0000117g0020 Nicotiana tabacum HOM05D004834 ORTHO05D006247 9.5e-29 131.0 170 49.4
MBI11_g39498_MAGBIO Magnolia biondii HOM05D004834 ORTHO05D006247 1.6e-28 130.2 169 45.6
Aa31sc167G60 Aethionema arabicum HOM05D004834 ORTHO05D006247 2.1e-28 129.8 174 47.7
Carub.0006s0546 Capsella rubella HOM05D004834 ORTHO05D006247 2.1e-28 129.8 119 58.8
A10p29810 Brassica napus HOM05D004834 ORTHO05D006247 3.6e-28 129.0 173 48.0
BraA10t45020Z Brassica rapa HOM05D004834 ORTHO05D006247 6.1e-28 128.3 173 46.2
CARHR206620 Cardamine hirsuta HOM05D004834 ORTHO05D006247 6.1e-28 128.3 175 45.7
AL6G16670 Arabidopsis lyrata HOM05D004834 ORTHO05D006247 1.0e-27 127.5 119 58.0
PSO384G0426 Papaver somniferum HOM05D004834 ORTHO05D006247 1.0e-27 127.5 184 45.1
ATR0697G015 Amborella trichopoda HOM05D004834 ORTHO05D006247 1.4e-27 127.1 137 50.4
Thhalv10013121m.g Eutrema salsugineum HOM05D004834 ORTHO05D006247 4.0e-27 125.6 171 48.0
AT5G06580 Arabidopsis thaliana HOM05D004834 ORTHO05D006247 6.8e-27 124.8 119 54.6
BolC9t59763H Brassica oleracea HOM05D004834 ORTHO05D006247 8.8e-27 124.4 119 57.1
C09p70190 Brassica napus HOM05D004834 ORTHO05D006247 4.4e-26 122.1 119 57.1
FAN02G4310 Fragaria x ananassa HOM05D004834 ORTHO05D006247 5.7e-26 121.7 158 50.0
vmacro07523 Vaccinium macrocarpon HOM05D004834 ORTHO05D006247 4.9e-25 118.6 67 77.6
unitig_26.g9147 Utricularia gibba HOM05D004834 ORTHO05D006247 6.3e-25 118.2 158 47.5
Glyma.19G202951 Glycine max HOM05D004834 ORTHO05D006247 1.2e-23 114.0 68 70.6
Nitab4.5_0000670g0060 Nicotiana tabacum HOM05D004834 ORTHO05D006247 1.3e-22 110.5 170 43.5
Oeu035654.3 Olea europaea HOM05D004834 ORTHO05D006247 2.9e-22 109.4 79 62.0
vmacro07525 Vaccinium macrocarpon HOM05D004834 ORTHO05D006247 2.9e-22 109.4 68 67.6
FAN14G4987 Fragaria x ananassa HOM05D004834 ORTHO05D006247 8.6e-22 107.8 60 78.3
FAN05G2138 Fragaria x ananassa HOM05D004834 ORTHO05D006247 5.6e-21 105.1 57 78.9
FAN05G4019 Fragaria x ananassa HOM05D004834 ORTHO05D006247 2.1e-20 103.2 56 78.6
CDE07G2068 Ceratophyllum demersum HOM05D004834 ORTHO05D006247 1.4e-19 100.5 109 47.7
Actinidia03850 Actinidia chinensis HOM05D004834 ORTHO05D006247 5.2e-19 98.6 51 82.4
HPP92_012150 Vanilla planifolia HOM05D004834 ORTHO05D006247 7.5e-18 94.7 103 55.3
Os07g0163000 Oryza sativa ssp. japonica HOM05D004834 ORTHO05D006247 4.9e-17 92.0 85 49.4
Duzib093G1706 Durio zibethinus HOM05D004834 ORTHO05D006247 9.2e-16 87.8 129 51.2
Hund10783 Selenicereus undatus HOM05D004834 ORTHO05D006247 1.9e-13 80.1 310 27.1
Thhalv10014980m.g Eutrema salsugineum HOM05D004834 ORTHO05D006247 2.6e-10 69.7 46 67.4
Oeu063072.1 Olea europaea HOM05D004834 ORTHO05D006247 5.8e-10 68.6 45 66.7
Cfa020095 Carpinus fangiana HOM05D004834 ORTHO05D006247 1.7e-09 67.0 29 96.6
CAN.G409.3 Capsicum annuum HOM05D004834 ORTHO05D006247 4.9e-09 65.5 31 83.9
CsaV3_3G038380 Cucumis sativus L. HOM05D004834 ORTHO05D006247 4.9e-09 65.5 31 87.1
Mapoly0056s0055 Marchantia polymorpha HOM05D004834 ORTHO05D006247 1.2e-07 60.8 66 43.9
arahy.Tifrunner.gnm1.ann1.FRUA2D Arachis hypogaea HOM05D002038 ORTHO05D002165 2.3e-06 56.6 69 46.4


User provided reference genes

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