Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p025600 Quercus lobata HOM05D000861 ORTHO05D004749 1.6e-206 722.6 389 100.0
Haze_20079 Corylus avellana HOM05D000861 ORTHO05D004749 1.6e-161 573.2 367 78.7
Cfa006350 Carpinus fangiana HOM05D000861 ORTHO05D004749 2.1e-158 562.8 366 76.2
Haze_04427 Corylus avellana HOM05D000861 ORTHO05D004749 3.4e-156 555.4 366 75.7
CiPaw.09G025900 Carya illinoinensis HOM05D000861 ORTHO05D004749 6.8e-149 531.2 355 74.9
CiPaw.10G023500 Carya illinoinensis HOM05D000861 ORTHO05D004749 2.4e-146 522.7 362 74.0
Dinv25026 Davidia involucrata HOM05D000861 ORTHO05D004749 1.6e-142 510.0 353 72.8
Lj1g0012940 Lotus japonicus HOM05D000861 ORTHO05D004749 7.8e-137 491.1 355 67.9
TWI74G1428 Tripterygium wilfordii HOM05D000861 ORTHO05D004749 7.8e-137 491.1 349 70.2
RcHm_v2.0_Chr1g0331291 Rosa chinensis HOM05D000861 ORTHO05D004749 2.3e-136 489.6 345 69.3
FAN01G1629 Fragaria x ananassa HOM05D000861 ORTHO05D004749 5.6e-135 485.0 346 67.6
FAN06G3356 Fragaria x ananassa HOM05D000861 ORTHO05D004749 1.6e-134 483.4 346 67.9
Glyma.19G204100 Glycine max HOM05D000861 ORTHO05D004749 1.6e-134 483.4 382 64.9
FAN10G0630 Fragaria x ananassa HOM05D000861 ORTHO05D004749 2.8e-134 482.6 346 67.3
FvH4_7g05020 Fragaria vesca HOM05D000861 ORTHO05D004749 3.6e-134 482.3 346 67.6
Glyma.03G206500 Glycine max HOM05D000861 ORTHO05D004749 2.3e-133 479.6 349 68.5
CSS0019173 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 1.3e-131 473.8 357 66.4
Ca_00040_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 1.3e-131 473.8 385 59.7
vmacro05483 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 1.3e-131 473.8 353 70.3
TAR633G2067 Trochodendron aralioides HOM05D000861 ORTHO05D004749 3.7e-131 472.2 359 68.0
Prupe.2G061200 Prunus persica HOM05D000861 ORTHO05D004749 4.9e-131 471.9 346 66.8
Potri.016G062900 Populus trichocarpa HOM05D000861 ORTHO05D004749 6.4e-131 471.5 351 66.7
GSVIVG01033426001 Vitis vinifera HOM05D000861 ORTHO05D004749 1.1e-130 470.7 356 69.7
VMungo1383G1884 Vigna mungo HOM05D000861 ORTHO05D004749 2.1e-129 466.5 367 64.9
Manes.08G039800 Manihot esculenta HOM05D000861 ORTHO05D004749 6.6e-128 461.5 358 65.4
Psat6g110040 Pisum sativum HOM05D000861 ORTHO05D004749 1.9e-127 459.9 356 62.9
Sabra16G0065200 Salix brachista HOM05D000861 ORTHO05D004749 3.3e-127 459.1 369 63.7
Lj2A1153T47 Lonicera japonica HOM05D000861 ORTHO05D004749 4.3e-127 458.8 347 62.8
Rhsim10G0079800 Rhododendron simsii HOM05D000861 ORTHO05D004749 5.6e-127 458.4 369 62.1
TPR.G29255 Trifolium pratense HOM05D000861 ORTHO05D004749 5.6e-127 458.4 363 61.2
CANSAT54G1949 Cannabis sativa HOM05D000861 ORTHO05D004749 2.8e-126 456.1 347 64.3
Psat1g222880 Pisum sativum HOM05D000861 ORTHO05D004749 4.7e-126 455.3 382 57.9
Lalb_Chr01g0017651 Lupinus albus HOM05D000861 ORTHO05D004749 8.1e-126 454.5 350 64.0
Lalb_Chr20g0111111 Lupinus albus HOM05D000861 ORTHO05D004749 1.8e-125 453.4 376 58.5
Glyma.02G168400 Glycine max HOM05D000861 ORTHO05D004749 4.0e-125 452.2 383 60.1
MELO3C009074.2 Cucumis melo HOM05D000861 ORTHO05D008567 5.2e-125 451.8 365 60.5
TPR.G2104 Trifolium pratense HOM05D000861 ORTHO05D004749 8.9e-125 451.1 350 61.1
Cc09_g02090 Coffea canephora HOM05D000861 ORTHO05D004749 1.2e-124 450.7 355 62.0
TAR636G3394 Trochodendron aralioides HOM05D000861 ORTHO05D004749 1.2e-124 450.7 367 61.6
TPR.G14497 Trifolium pratense HOM05D000861 ORTHO05D004749 3.4e-124 449.1 353 62.3
CsaV3_4G031490 Cucumis sativus L. HOM05D000861 ORTHO05D004749 4.4e-124 448.7 364 60.4
Aqoxy4G02829 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 7.6e-124 448.0 357 62.2
Lalb_Chr25g0287681 Lupinus albus HOM05D000861 ORTHO05D004749 7.6e-124 448.0 350 61.4
Sp3g10170 Schrenkiella parvula HOM05D000861 ORTHO05D004749 9.9e-124 447.6 369 60.4
Nn2g14698 Nelumbo nucifera HOM05D000861 ORTHO05D004749 4.9e-123 445.3 349 63.9
RcHm_v2.0_Chr1g0331341 Rosa chinensis HOM05D000861 ORTHO05D004749 1.4e-122 443.7 306 69.3
MD02G1263700 Malus domestica HOM05D000861 ORTHO05D004749 2.4e-122 443.0 346 67.3
Medtr1g054715 Medicago truncatula HOM05D000861 ORTHO05D004749 2.4e-122 443.0 353 60.6
PGSC0003DMG400002212 Solanum tuberosum HOM05D000861 ORTHO05D004749 9.2e-122 441.0 366 58.5
CSS0040474 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 1.6e-121 440.3 327 67.6
Sopen04g019180 Solanum pennellii HOM05D000861 ORTHO05D004749 3.5e-121 439.1 362 59.1
MD07G1054500 Malus domestica HOM05D000861 ORTHO05D004749 4.6e-121 438.7 346 66.8
Migut.C01187 Erythranthe guttata HOM05D000861 ORTHO05D004749 1.7e-120 436.8 350 61.4
ClCG04G000550 Citrullus lanatus HOM05D000861 ORTHO05D004749 2.3e-120 436.4 350 62.0
THA.LOC104826781 Tarenaya hassleriana HOM05D000861 ORTHO05D004749 3.0e-120 436.0 364 58.5
SGA_v2.0_scaffold274G46507 Striga asiatica HOM05D000861 ORTHO05D004749 3.9e-120 435.6 351 64.7
Solyc04g049290.2 Solanum lycopersicum HOM05D000861 ORTHO05D004749 5.1e-120 435.3 362 58.8
PGR004G1046 Punica granatum HOM05D000861 ORTHO05D004749 1.9e-119 433.3 369 59.1
Peaxi162Scf00072g00619 Petunia axillaris HOM05D000861 ORTHO05D004749 2.5e-119 433.0 369 60.4
Duzib093G1597 Durio zibethinus HOM05D000861 ORTHO05D004749 4.3e-119 432.2 348 67.0
Nn5g30627 Nelumbo nucifera HOM05D000861 ORTHO05D004749 5.6e-119 431.8 339 63.1
Manes.09G040600 Manihot esculenta HOM05D000861 ORTHO05D004749 1.2e-118 430.6 314 66.6
Sabra06G0151900 Salix brachista HOM05D000861 ORTHO05D004749 1.2e-118 430.6 392 57.9
Nitab4.5_0000575g0240 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.6e-118 430.3 363 61.7
Hma1.2p1_0636F.1_g193240 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 2.1e-118 429.9 309 66.3
Ca_26442_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 2.8e-118 429.5 306 69.0
arahy.Tifrunner.gnm1.ann1.BI8ZDZ Arachis hypogaea HOM05D000861 ORTHO05D004749 4.7e-118 428.7 346 59.8
arahy.Tifrunner.gnm1.ann1.9W4D6L Arachis hypogaea HOM05D000861 ORTHO05D004749 6.2e-118 428.3 346 59.5
Hma1.2p1_0516F.1_g170530 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 8.9e-117 424.5 350 63.1
Thecc.05G180600 Theobroma cacao HOM05D000861 ORTHO05D004749 1.2e-116 424.1 368 64.4
Sabra16G0064900 Salix brachista HOM05D000861 ORTHO05D004749 1.5e-116 423.7 364 59.6
Phvul.007G262800 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 2.6e-116 422.9 353 61.5
Lj1A65T56 Lonicera japonica HOM05D000861 ORTHO05D004749 5.8e-116 421.8 342 59.1
Duzib128G1936 Durio zibethinus HOM05D000861 ORTHO05D004749 7.6e-116 421.4 369 62.3
Eucgr.A02509 Eucalyptus grandis HOM05D000861 ORTHO05D004749 1.3e-115 420.6 335 63.0
MBI01_g21127_MAGBIO Magnolia biondii HOM05D000861 ORTHO05D004749 1.7e-115 420.2 336 61.6
Ciclev10012217m.g Citrus clementina HOM05D000861 ORTHO05D004749 2.9e-115 419.5 310 64.5
Lj5g0002775 Lotus japonicus HOM05D000861 ORTHO05D004749 2.9e-115 419.5 361 61.5
VMungo0720G2154 Vigna mungo HOM05D000861 ORTHO05D004749 8.4e-115 417.9 349 57.9
arahy.Tifrunner.gnm1.ann1.2N6KDB Arachis hypogaea HOM05D000861 ORTHO05D004749 2.4e-114 416.4 343 58.6
arahy.Tifrunner.gnm1.ann1.5F6CY5 Arachis hypogaea HOM05D000861 ORTHO05D004749 4.2e-114 415.6 359 56.8
CAN.G186.36 Capsicum annuum HOM05D000861 ORTHO05D004749 5.4e-114 415.2 339 62.2
Peaxi162Scf00195g00910 Petunia axillaris HOM05D000861 ORTHO05D004749 1.2e-113 414.1 342 62.0
COL.COLO4_29438 Corchorus olitorius HOM05D000861 ORTHO05D004749 4.6e-113 412.1 346 64.5
Atru.chr8.1223 Acer truncatum HOM05D000861 ORTHO05D004749 2.3e-112 409.8 351 64.4
Nitab4.5_0007421g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 2.3e-112 409.8 364 59.6
PSO384G1311 Papaver somniferum HOM05D000861 ORTHO05D004749 2.3e-112 409.8 350 60.0
Phvul.001G200100 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 5.1e-112 408.7 306 67.0
vmacro22548 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 8.7e-112 407.9 353 63.2
ECA234G4058 Erigeron canadensis HOM05D000861 ORTHO05D004749 1.1e-111 407.5 353 56.9
PGSC0003DMG400016019 Solanum tuberosum HOM05D000861 ORTHO05D004749 7.3e-111 404.8 339 60.8
HanXRQChr12g0359061 Helianthus annuus HOM05D000861 ORTHO05D004749 1.3e-110 404.1 368 55.2
Sabra16G0065500 Salix brachista HOM05D000861 ORTHO05D004749 2.8e-110 402.9 378 56.6
Sed0004581 Sechium edule HOM05D000861 ORTHO05D004749 3.6e-110 402.5 362 55.5
Sopen04g004750 Solanum pennellii HOM05D000861 ORTHO05D004749 3.6e-110 402.5 369 58.0
BcaB06g25559 Brassica carinata HOM05D000861 ORTHO05D004749 4.8e-110 402.1 366 55.5
Aqoxy2G01335 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 6.2e-110 401.7 327 59.6
Solyc04g009600.3 Solanum lycopersicum HOM05D000861 ORTHO05D004749 6.2e-110 401.7 369 58.0
Carub.0003s1128 Capsella rubella HOM05D000861 ORTHO05D004749 1.3e-107 394.0 369 56.9
Gohir.A09G130700 Gossypium hirsutum HOM05D000861 ORTHO05D004749 1.3e-107 394.0 346 61.6
AUR62025238 Chenopodium quinoa HOM05D000861 ORTHO05D004749 4.9e-107 392.1 350 56.3
Lsat_1_v5_gn_2_66000 Lactuca sativa HOM05D000861 ORTHO05D004749 5.4e-106 388.7 360 54.7
AL3G23550 Arabidopsis lyrata HOM05D000861 ORTHO05D004749 9.3e-106 387.9 367 56.9
BraA05t22541Z Brassica rapa HOM05D000861 ORTHO05D007385 9.3e-106 387.9 366 54.4
Nitab4.5_0008820g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 9.3e-106 387.9 350 56.9
BcaC05g29310 Brassica carinata HOM05D000861 ORTHO05D004749 1.2e-105 387.5 357 55.7
A05p37430 Brassica napus HOM05D000861 ORTHO05D007385 4.6e-105 385.6 366 54.1
C05p55990 Brassica napus HOM05D000861 ORTHO05D004749 7.8e-105 384.8 357 55.2
Gohir.D01G123600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 1.0e-104 384.4 349 58.2
Gorai.002G154600 Gossypium raimondii HOM05D000861 ORTHO05D004749 1.0e-104 384.4 349 58.5
Oeu022105.1 Olea europaea HOM05D000861 ORTHO05D004749 1.7e-104 383.6 349 59.9
Oeu003219.1 Olea europaea HOM05D000861 ORTHO05D004749 6.6e-104 381.7 349 59.6
Gohir.A01G136400 Gossypium hirsutum HOM05D000861 ORTHO05D004749 1.5e-103 380.6 349 57.9
AT3G11950 Arabidopsis thaliana HOM05D000861 ORTHO05D004749 1.9e-103 380.2 369 55.3
MSTRG.26071 Avicennia marina HOM05D000861 ORTHO05D004749 2.5e-103 379.8 349 57.6
Thhalv10020413m.g Eutrema salsugineum HOM05D000861 ORTHO05D004749 2.1e-102 376.7 361 57.3
EL10Ac8g19073 Beta vulgaris HOM05D000861 ORTHO05D004749 4.8e-102 375.6 355 56.9
Dinv24029 Davidia involucrata HOM05D000861 ORTHO05D004749 1.8e-101 373.6 249 72.3
CARHR086500 Cardamine hirsuta HOM05D000861 ORTHO05D004749 2.4e-101 373.2 370 55.9
Sc13g0002540 Simmondsia chinensis HOM05D000861 ORTHO05D004749 2.0e-100 370.2 359 55.7
unitig_749.g14024 Utricularia gibba HOM05D000861 ORTHO05D004749 4.9e-99 365.5 323 54.2
Oeu051191.1 Olea europaea HOM05D000861 ORTHO05D004749 4.2e-98 362.5 351 56.7
BcaB04g18704 Brassica carinata HOM05D000861 ORTHO05D004749 7.9e-97 358.2 271 63.8
Aa31LG3G5570 Aethionema arabicum HOM05D000861 ORTHO05D004749 1.0e-96 357.8 340 55.0
BcaC01g04070 Brassica carinata HOM05D000861 ORTHO05D007385 1.3e-96 357.5 370 53.8
BolC3t16804H Brassica oleracea HOM05D000861 ORTHO05D004749 1.3e-96 357.5 370 53.8
BraA03t12899Z Brassica rapa HOM05D000861 ORTHO05D004749 2.3e-96 356.7 371 52.6
C03p45380 Brassica napus HOM05D000861 ORTHO05D004749 1.9e-95 353.6 370 52.4
A03p37380 Brassica napus HOM05D000861 ORTHO05D004749 3.3e-95 352.8 371 52.0
AUR62028947 Chenopodium quinoa HOM05D000861 ORTHO05D004749 2.1e-94 350.1 406 47.5
CDE05G2486 Ceratophyllum demersum HOM05D000861 ORTHO05D004749 7.6e-92 341.7 319 55.8
Gohir.D09G126600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 1.0e-91 341.3 275 66.9
Ah.09g231540 Amaranthus hybridus HOM05D000861 ORTHO05D004749 7.1e-90 335.1 352 52.3
PSO425G0018 Papaver somniferum HOM05D000861 ORTHO05D004749 1.2e-89 334.3 287 59.6
ATR0789G014 Amborella trichopoda HOM05D000861 ORTHO05D004749 6.0e-89 332.0 312 52.2
Cpa.g.sc85.15 Carica papaya HOM05D000861 ORTHO05D004749 1.8e-88 330.5 354 49.7
Nitab4.5_0000691g0150 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.1e-87 327.8 334 54.5
DCAR_027450 Daucus carota HOM05D000861 ORTHO05D004749 2.5e-87 326.6 298 54.7
Gorai.006G145500 Gossypium raimondii HOM05D000861 ORTHO05D004749 3.4e-76 289.7 275 60.0
SHI28323 Sapria himalayana HOM05D000861 ORTHO05D004749 2.2e-75 287.0 336 44.6
Os02g0605500 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 5.5e-74 282.3 333 45.0
Zm00001eb246660 Zea mays HOM05D000861 ORTHO05D004749 5.5e-74 282.3 332 44.0
Zm00001eb195790 Zea mays HOM05D000861 ORTHO05D004749 5.7e-71 272.3 323 47.4
Os12g0181300 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 6.9e-69 265.4 318 47.2
Os04g0218900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 2.0e-68 263.8 318 46.9
Os05g0305200 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 1.0e-67 261.5 318 46.5
Mapoly0057s0035 Marchantia polymorpha HOM05D000861 ORTHO05D004749 4.7e-65 252.7 346 39.6
Actinidia01592 Actinidia chinensis HOM05D000861 ORTHO05D004749 6.3e-62 242.3 225 56.0
Zm00001eb093630 Zea mays HOM05D000861 ORTHO05D004749 1.2e-60 238.0 323 44.0
HPP92_008306 Vanilla planifolia HOM05D000861 ORTHO05D004749 2.9e-59 233.4 192 52.6
Zm00001eb421970 Zea mays HOM05D000861 ORTHO05D004749 6.1e-57 225.7 290 42.4
AagrBONN_evm.TU.Sc2ySwM_228.1074 Anthoceros agrestis HOM05D000861 ORTHO05D004749 4.4e-55 219.5 355 36.6
Pp3c24_6130 Physcomitrium patens HOM05D000861 ORTHO05D004749 7.5e-55 218.8 312 38.5
Pp3c13_13880 Physcomitrium patens HOM05D000861 ORTHO05D004749 3.7e-54 216.5 325 35.4
SMO194G0050 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 2.9e-51 206.8 292 40.8
SMO358G0316 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 2.9e-51 206.8 292 40.8
CBR_g23522 Chara braunii HOM05D000861 ORTHO05D004749 3.2e-50 203.4 272 37.9
SEGI_19220 Sequoiadendron giganteum HOM05D000861 ORTHO05D004749 1.4e-48 198.0 299 36.1
TAR626G0577 Trochodendron aralioides HOM05D000861 ORTHO05D003237 1.7e-46 191.0 140 67.1
HPP92_003821 Vanilla planifolia HOM05D000861 ORTHO05D004749 5.4e-45 186.0 215 44.2
Os04g0217900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 1.7e-43 181.0 153 55.6
TAR626G1779 Trochodendron aralioides HOM05D000861 ORTHO05D004749 4.0e-40 169.9 118 70.3
Actinidia17295 Actinidia chinensis HOM05D000861 ORTHO05D004749 2.2e-38 164.1 133 60.2
HPP92_003796 Vanilla planifolia HOM05D000861 ORTHO05D004749 7.0e-37 159.1 161 49.7
SMO361G0253 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 2.8e-33 147.1 258 39.9
Nitab4.5_0000691g0180 Nicotiana tabacum HOM05D000861 ORTHO05D004749 3.6e-33 146.7 162 52.5
TAR371G0304 Trochodendron aralioides HOM05D000861 ORTHO05D003237 3.6e-33 146.7 111 64.0
SalBow6G1870 Salvia bowleyana HOM05D000861 ORTHO05D004749 2.3e-32 144.1 136 55.9
RcHm_v2.0_Chr3g0486361 Rosa chinensis HOM05D000861 ORTHO05D004749 2.8e-25 120.6 84 66.7
TAR375G0848 Trochodendron aralioides HOM05D000861 ORTHO05D004749 1.7e-19 101.3 127 46.5
RcHm_v2.0_Chr3g0486371 Rosa chinensis HOM05D000861 ORTHO05D004749 1.5e-18 98.2 74 63.5
HPP92_003822 Vanilla planifolia HOM05D000861 ORTHO05D004749 2.5e-18 97.4 90 52.2
Actinidia38607 Actinidia chinensis HOM05D000861 ORTHO05D004749 1.2e-15 88.6 116 42.2
MCO14G045 Micromonas commoda HOM05D000861 ORTHO05D004749 7.5e-15 85.9 273 24.9
RcHm_v2.0_Chr3g0486481 Rosa chinensis HOM05D000861 ORTHO05D004749 1.7e-14 84.7 55 69.1


User provided reference genes

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