Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p017873 Quercus lobata HOM05D004104 ORTHO05D004755 2.9e-82 308.5 158 100.0
CiPaw.01G185000 Carya illinoinensis HOM05D004104 ORTHO05D004755 1.8e-63 246.1 158 82.3
Haze_11377 Corylus avellana HOM05D004104 ORTHO05D004755 6.7e-63 244.2 158 81.6
GSVIVG01027809001 Vitis vinifera HOM05D004104 ORTHO05D004755 5.0e-58 228.0 156 77.6
Atru.chr4.2063 Acer truncatum HOM05D004104 ORTHO05D004755 1.2e-56 223.4 160 73.8
COL.COLO4_15874 Corchorus olitorius HOM05D004104 ORTHO05D004755 4.7e-56 221.5 156 76.3
Thecc.04G255000 Theobroma cacao HOM05D004104 ORTHO05D004755 1.8e-55 219.5 156 76.3
Dinv27050 Davidia involucrata HOM05D004104 ORTHO05D004755 3.0e-55 218.8 158 74.7
Duzib052G0511 Durio zibethinus HOM05D004104 ORTHO05D004755 2.6e-54 215.7 156 75.6
Gohir.D02G045400 Gossypium hirsutum HOM05D004104 ORTHO05D004755 1.4e-52 209.9 156 72.4
Gorai.005G050100 Gossypium raimondii HOM05D004104 ORTHO05D004755 1.4e-52 209.9 156 72.4
Lalb_Chr21g0313851 Lupinus albus HOM05D004104 ORTHO05D004755 2.4e-52 209.1 157 72.6
VMungo0720G2373 Vigna mungo HOM05D004104 ORTHO05D004755 5.3e-52 208.0 157 72.6
Ca_09682_v3 Cicer arietinum L. HOM05D004104 ORTHO05D004755 9.1e-52 207.2 157 72.6
Phvul.007G193100 Phaseolus vulgaris HOM05D004104 ORTHO05D004755 9.1e-52 207.2 157 72.0
Gohir.A02G039300 Gossypium hirsutum HOM05D004104 ORTHO05D004755 1.2e-51 206.8 156 71.8
Duzib151G0362 Durio zibethinus HOM05D004104 ORTHO05D004755 2.7e-51 205.7 156 72.4
arahy.Tifrunner.gnm1.ann1.QEJR01 Arachis hypogaea HOM05D004104 ORTHO05D004755 3.5e-51 205.3 157 71.3
Glyma.10G036900 Glycine max HOM05D004104 ORTHO05D004755 1.0e-50 203.8 157 70.7
TPR.G24709 Trifolium pratense HOM05D004104 ORTHO05D004755 1.0e-50 203.8 156 72.4
Psat6g055120 Pisum sativum HOM05D004104 ORTHO05D004755 1.3e-50 203.4 157 71.3
Medtr1g069925 Medicago truncatula HOM05D004104 ORTHO05D004755 5.0e-50 201.4 157 70.7
Lsat_1_v5_gn_3_120420 Lactuca sativa HOM05D004104 ORTHO05D004755 8.5e-50 200.7 155 71.0
Potri.002G038700 Populus trichocarpa HOM05D004104 ORTHO05D004755 1.9e-49 199.5 157 69.4
TPR.G6322 Trifolium pratense HOM05D004104 ORTHO05D004755 3.2e-49 198.7 156 71.2
Lj5g0006581 Lotus japonicus HOM05D004104 ORTHO05D004755 4.2e-49 198.4 154 71.4
Prupe.8G224100 Prunus persica HOM05D004104 ORTHO05D004755 1.2e-48 196.8 157 70.1
CiPaw.03G263800 Carya illinoinensis HOM05D004104 ORTHO05D004755 1.6e-48 196.4 157 68.8
PSO357G0016 Papaver somniferum HOM05D004104 ORTHO05D004755 1.6e-48 196.4 160 71.2
Rhsim02G0037300 Rhododendron simsii HOM05D004104 ORTHO05D004755 2.1e-48 196.1 158 65.8
Cc03_g05510 Coffea canephora HOM05D004104 ORTHO05D004755 2.7e-48 195.7 158 68.4
QL09p038638 Quercus lobata HOM05D004104 ORTHO05D004755 2.7e-48 195.7 157 68.2
TWI12G1345 Tripterygium wilfordii HOM05D004104 ORTHO05D004755 2.7e-48 195.7 157 68.2
Ca_09886_v3 Cicer arietinum L. HOM05D004104 ORTHO05D004755 3.6e-48 195.3 148 73.6
PSO170G1063 Papaver somniferum HOM05D004104 ORTHO05D004755 6.1e-48 194.5 160 70.6
Atru.chr5.1672 Acer truncatum HOM05D004104 ORTHO05D004755 8.0e-48 194.1 157 69.4
ClCG09G007780 Citrullus lanatus HOM05D000113 ORTHO05D004634 1.0e-47 193.7 157 67.5
Potri.005G223900 Populus trichocarpa HOM05D004104 ORTHO05D004755 1.0e-47 193.7 157 68.2
ECA240G4332 Erigeron canadensis HOM05D004104 ORTHO05D004755 1.4e-47 193.4 155 68.4
PGR044G0499 Punica granatum HOM05D004104 ORTHO05D004755 1.4e-47 193.4 156 70.5
HanXRQChr03g0091411 Helianthus annuus HOM05D004104 ORTHO05D004755 1.8e-47 193.0 155 67.7
Aqoxy2G03638 Aquilegia oxysepala HOM05D004104 ORTHO05D004755 2.3e-47 192.6 158 69.6
CsaV3_7G027350 Cucumis sativus L. HOM05D004104 ORTHO05D004755 2.3e-47 192.6 157 67.5
CANSAT01G3088 Cannabis sativa HOM05D004104 ORTHO05D004755 3.0e-47 192.2 157 67.5
Cpa.g.sc50.23 Carica papaya HOM05D004104 ORTHO05D004755 4.0e-47 191.8 157 67.5
Nitab4.5_0001005g0090 Nicotiana tabacum HOM05D004104 ORTHO05D004755 5.2e-47 191.4 158 67.1
arahy.Tifrunner.gnm1.ann1.0Z487T Arachis hypogaea HOM05D000348 ORTHO05D000244 6.8e-47 191.0 153 68.6
Manes.12G032000 Manihot esculenta HOM05D004104 ORTHO05D004755 6.8e-47 191.0 156 68.6
Thecc.01G258800 Theobroma cacao HOM05D004104 ORTHO05D004755 6.8e-47 191.0 158 68.4
THA.LOC104822244 Tarenaya hassleriana HOM05D004104 ORTHO05D004755 1.5e-46 189.9 156 67.3
arahy.Tifrunner.gnm1.ann1.6K1PAL Arachis hypogaea HOM05D000348 ORTHO05D000244 3.4e-46 188.7 153 68.0
Eucgr.K03263 Eucalyptus grandis HOM05D004104 ORTHO05D004755 3.4e-46 188.7 156 69.9
Nitab4.5_0000044g0340 Nicotiana tabacum HOM05D004104 ORTHO05D004755 3.4e-46 188.7 158 66.5
GSVIVG01028325001 Vitis vinifera HOM05D004104 ORTHO05D004755 3.4e-46 188.7 155 67.7
AT4G14385 Arabidopsis thaliana HOM05D004104 ORTHO05D004755 4.4e-46 188.3 156 67.3
Ciclev10006103m.g Citrus clementina HOM05D004104 ORTHO05D004755 5.7e-46 188.0 155 66.5
FAN27G1683 Fragaria x ananassa HOM05D005758 ORTHO05D007218 5.7e-46 188.0 158 67.7
SEGI_09266 Sequoiadendron giganteum HOM05D004104 ORTHO05D004755 7.5e-46 187.6 154 66.2
Glyma.13G123300 Glycine max HOM05D004104 ORTHO05D004755 9.8e-46 187.2 143 71.3
Sopen09g033030 Solanum pennellii HOM05D004104 ORTHO05D004755 9.8e-46 187.2 158 66.5
RcHm_v2.0_Chr6g0288171 Rosa chinensis HOM05D004104 ORTHO05D004755 1.3e-45 186.8 155 69.0
Sabra02G0031000 Salix brachista HOM05D004104 ORTHO05D004755 1.3e-45 186.8 157 65.6
Haze_24627 Corylus avellana HOM05D005758 ORTHO05D007218 1.7e-45 186.4 147 70.1
FAN15G0777 Fragaria x ananassa HOM05D005758 ORTHO05D007218 1.7e-45 186.4 158 67.7
Sed0024271 Sechium edule HOM05D004104 ORTHO05D004755 1.7e-45 186.4 157 64.3
AL7G41830 Arabidopsis lyrata HOM05D004104 ORTHO05D004755 2.2e-45 186.0 153 64.7
TAR636G3439 Trochodendron aralioides HOM05D004104 ORTHO05D004755 2.2e-45 186.0 154 69.5
Actinidia01846 Actinidia chinensis HOM05D004104 ORTHO05D004755 2.8e-45 185.7 158 65.2
Solyc09g090120.3 Solanum lycopersicum HOM05D004104 ORTHO05D004755 4.8e-45 184.9 158 65.8
Duzib211G0552 Durio zibethinus HOM05D004104 ORTHO05D004755 6.3e-45 184.5 158 66.5
MD10G1184400 Malus domestica HOM05D004104 ORTHO05D004755 8.3e-45 184.1 157 69.4
TAR365G1233 Trochodendron aralioides HOM05D004104 ORTHO05D004755 2.4e-44 182.6 153 69.3
FAN20G0124 Fragaria x ananassa HOM05D004104 ORTHO05D004755 4.1e-44 181.8 155 67.1
vmacro15441 Vaccinium macrocarpon HOM05D004104 ORTHO05D004755 7.0e-44 181.0 151 67.5
MD05G1197800 Malus domestica HOM05D004104 ORTHO05D004755 9.1e-44 180.6 153 69.3
Aqoxy2G03648 Aquilegia oxysepala HOM05D004104 ORTHO05D004755 1.2e-43 180.3 154 69.5
Aa31LG9G2930 Aethionema arabicum HOM05D004104 ORTHO05D004755 2.0e-43 179.5 156 64.1
Ciclev10023660m.g Citrus clementina HOM05D004104 ORTHO05D004755 2.7e-43 179.1 172 63.4
Gohir.A08G190000 Gossypium hirsutum HOM05D004104 ORTHO05D004755 2.7e-43 179.1 157 66.2
A04p07650 Brassica napus HOM05D004104 ORTHO05D004755 4.5e-43 178.3 184 59.2
Gohir.D08G208500 Gossypium hirsutum HOM05D004104 ORTHO05D004755 5.9e-43 177.9 157 65.6
Gorai.004G220900 Gossypium raimondii HOM05D004104 ORTHO05D004755 5.9e-43 177.9 157 65.6
SalBow3G2247 Salvia bowleyana HOM05D004104 ORTHO05D004755 1.7e-42 176.4 155 62.6
CDE04G2476 Ceratophyllum demersum HOM05D004104 ORTHO05D004755 6.5e-42 174.5 158 63.3
COL.COLO4_05896 Corchorus olitorius HOM05D005758 ORTHO05D007218 2.5e-41 172.6 129 72.1
Manes.03G164300 Manihot esculenta HOM05D004104 ORTHO05D004755 7.2e-41 171.0 140 67.9
CARHR220610 Cardamine hirsuta HOM05D004104 ORTHO05D004755 3.6e-40 168.7 153 59.5
Thhalv10026437m.g Eutrema salsugineum HOM05D004104 ORTHO05D004755 1.0e-39 167.2 153 60.1
FvH4_2g21510 Fragaria vesca HOM05D005758 ORTHO05D007218 4.0e-39 165.2 202 53.0
Cc06_g07960 Coffea canephora HOM05D004104 ORTHO05D004755 5.2e-39 164.9 155 63.9
Migut.G00520 Erythranthe guttata HOM05D004104 ORTHO05D004755 5.2e-39 164.9 155 61.3
BcaB02g08611 Brassica carinata HOM05D004104 ORTHO05D004755 6.8e-39 164.5 154 61.0
Os01g0233400 Oryza sativa ssp. japonica HOM05D004104 ORTHO05D004755 8.8e-39 164.1 142 65.5
Os12g0298600 Oryza sativa ssp. japonica HOM05D004104 ORTHO05D004755 8.8e-39 164.1 142 65.5
BcaC02g09319 Brassica carinata HOM05D004104 ORTHO05D004755 1.2e-38 163.7 153 60.8
C04p41340 Brassica napus HOM05D004104 ORTHO05D004755 1.2e-38 163.7 153 60.8
BraA04t16456Z Brassica rapa HOM05D004104 ORTHO05D004755 1.2e-38 163.7 153 60.8
EL10Ac5g10403 Beta vulgaris HOM05D004104 ORTHO05D004755 1.5e-38 163.3 155 60.0
Carub.0007s2785 Capsella rubella HOM05D004104 ORTHO05D004755 2.0e-38 162.9 153 57.5
AUR62011875 Chenopodium quinoa HOM05D004104 ORTHO05D004755 4.4e-38 161.8 155 60.0
Rhsim01G0264300 Rhododendron simsii HOM05D004104 ORTHO05D004755 4.4e-38 161.8 155 61.9
Sabra05G0172700 Salix brachista HOM05D004104 ORTHO05D004755 4.4e-38 161.8 222 48.2
Sp7g12470 Schrenkiella parvula HOM05D004104 ORTHO05D004755 4.4e-38 161.8 153 59.5
Actinidia25786 Actinidia chinensis HOM05D004104 ORTHO05D004755 5.7e-38 161.4 158 61.4
Nitab4.5_0000470g0160 Nicotiana tabacum HOM05D004104 ORTHO05D004755 7.5e-38 161.0 155 60.6
SGA_v2.0_scaffold138G35232 Striga asiatica HOM05D000374 ORTHO05D000238 1.3e-37 160.2 155 63.2
MSTRG.21496 Avicennia marina HOM05D004104 ORTHO05D004755 2.8e-37 159.1 155 61.9
SalBow4G1878 Salvia bowleyana HOM05D004104 ORTHO05D004755 2.8e-37 159.1 155 62.6
Nn3g19649 Nelumbo nucifera HOM05D004104 ORTHO05D004755 4.9e-37 158.3 122 72.1
HPP92_004791 Vanilla planifolia HOM05D004104 ORTHO05D004755 4.9e-37 158.3 125 70.4
SGA_v2.0_scaffold1G00613 Striga asiatica HOM05D004104 ORTHO05D004755 6.3e-37 157.9 155 62.6
BolC4t25712H Brassica oleracea HOM05D004104 ORTHO05D004755 8.3e-37 157.5 111 73.0
Nitab4.5_0009483g0030 Nicotiana tabacum HOM05D004104 ORTHO05D004755 1.1e-36 157.1 155 59.4
Hund11888 Selenicereus undatus HOM05D004104 ORTHO05D004755 1.8e-36 156.4 132 68.9
unitig_21.g20174 Utricularia gibba HOM05D004104 ORTHO05D004755 3.1e-36 155.6 149 59.7
Solyc09g072580.3 Solanum lycopersicum HOM05D004104 ORTHO05D004755 9.2e-36 154.1 155 58.7
Sopen09g028390 Solanum pennellii HOM05D004104 ORTHO05D004755 9.2e-36 154.1 155 58.7
PGSC0003DMG400010299 Solanum tuberosum HOM05D004104 ORTHO05D004755 9.2e-36 154.1 155 58.7
MSTRG.9892 Avicennia marina HOM05D004104 ORTHO05D004755 1.2e-35 153.7 141 62.4
CSS0037223 Camellia sinensis var. sinensis HOM05D004104 ORTHO05D004755 2.7e-35 152.5 155 58.7
Migut.D00423 Erythranthe guttata HOM05D004104 ORTHO05D004755 4.5e-35 151.8 155 61.3
MBI10_g37181_MAGBIO Magnolia biondii HOM05D004104 ORTHO05D004755 1.0e-34 150.6 123 68.3
Hund02913 Selenicereus undatus HOM05D004104 ORTHO05D004755 1.0e-34 150.6 160 56.9
Actinidia32304 Actinidia chinensis HOM05D004104 ORTHO05D004755 2.3e-34 149.4 126 65.1
MSTRG.18320 Avicennia marina HOM05D004104 ORTHO05D004755 2.9e-34 149.1 155 60.0
Dinv29861 Davidia involucrata HOM05D004104 ORTHO05D004755 1.1e-33 147.1 99 75.8
TWI18G1001 Tripterygium wilfordii HOM05D004104 ORTHO05D004755 1.9e-33 146.4 158 55.1
HanXRQChr04g0112651 Helianthus annuus HOM05D004104 ORTHO05D004755 2.5e-33 146.0 156 55.8
arahy.Tifrunner.gnm1.ann1.2HR6HW Arachis hypogaea HOM05D004104 ORTHO05D004755 1.2e-32 143.7 184 51.1
Mapoly0055s0054 Marchantia polymorpha HOM05D004104 ORTHO05D004755 2.1e-32 142.9 156 58.3
AUR62002135 Chenopodium quinoa HOM05D004104 ORTHO05D004755 2.8e-32 142.5 177 50.3
Gohir.A07G212800 Gossypium hirsutum HOM05D004104 ORTHO05D004755 8.0e-32 141.0 158 55.7
Pp3c8_15220 Physcomitrium patens HOM05D004104 ORTHO05D004755 1.0e-31 140.6 153 56.2
HPP92_008311 Vanilla planifolia HOM05D004104 ORTHO05D004755 1.4e-31 140.2 156 53.2
Ah.13g072460 Amaranthus hybridus HOM05D004104 ORTHO05D004755 3.4e-30 135.6 118 64.4
Pp3c24_15450 Physcomitrium patens HOM05D004104 ORTHO05D004755 3.4e-30 135.6 153 56.2
Gorai.001G253400 Gossypium raimondii HOM05D004104 ORTHO05D004755 4.4e-30 135.2 166 52.4
unitig_0.g154 Utricularia gibba HOM05D003973 ORTHO05D004679 4.4e-30 135.2 156 56.4
SEGI_16929 Sequoiadendron giganteum HOM05D004104 ORTHO05D004755 5.7e-30 134.8 112 67.0
Oeu011497.1 Olea europaea HOM05D004104 ORTHO05D004755 7.5e-30 134.4 97 72.2
ECA236G2125 Erigeron canadensis HOM05D004104 ORTHO05D004755 2.9e-29 132.5 160 53.1
Lsat_1_v5_gn_8_92980 Lactuca sativa HOM05D004104 ORTHO05D004755 8.3e-29 131.0 156 54.5
THA.LOC104825278 Tarenaya hassleriana HOM05D004104 ORTHO05D004755 8.3e-29 131.0 93 73.1
MELO3C015732.2 Cucumis melo HOM05D004104 ORTHO05D004755 1.8e-28 129.8 269 37.9
Lj1A66T60 Lonicera japonica HOM05D004104 ORTHO05D004755 2.4e-28 129.4 157 53.5
Manes.13G033700 Manihot esculenta HOM05D004104 ORTHO05D004755 4.1e-28 128.6 97 71.1
AagrBONN_evm.TU.Sc2ySwM_228.2514 Anthoceros agrestis HOM05D004104 ORTHO05D004755 1.6e-27 126.7 142 53.5
CBR_g31961 Chara braunii HOM05D004104 ORTHO05D004755 2.0e-27 126.3 153 51.0
AUR62015575 Chenopodium quinoa HOM05D004104 ORTHO05D004755 2.7e-27 125.9 94 70.2
SGA_v2.0_scaffold67G22747 Striga asiatica HOM05D004104 ORTHO05D004755 3.5e-27 125.6 155 50.3
THA.LOC104825277 Tarenaya hassleriana HOM05D004104 ORTHO05D004755 4.6e-27 125.2 166 50.0
EL10Ac3g05008 Beta vulgaris HOM05D004104 ORTHO05D004755 1.0e-26 124.0 93 71.0
Ah.11g049720 Amaranthus hybridus HOM05D004104 ORTHO05D004755 1.3e-26 123.6 116 60.3
Peaxi162Scf00543g00310 Petunia axillaris HOM05D004104 ORTHO05D004755 3.0e-26 122.5 147 52.4
Gohir.D07G218900 Gossypium hirsutum HOM05D004104 ORTHO05D004755 3.9e-26 122.1 94 71.3
Sc24g0003130 Simmondsia chinensis HOM05D004104 ORTHO05D004755 6.6e-26 121.3 101 63.4
AagrBONN_evm.TU.Sc2ySwM_368.1944 Anthoceros agrestis HOM05D004104 ORTHO05D004755 8.6e-26 120.9 142 52.8
Ah.04g155820 Amaranthus hybridus HOM05D004104 ORTHO05D004755 1.5e-25 120.2 92 68.5
PGSC0003DMG400017224 Solanum tuberosum HOM05D004104 ORTHO05D004755 1.5e-25 120.2 171 48.0
Peaxi162Scf00855g00233 Petunia axillaris HOM05D004104 ORTHO05D004755 1.6e-24 116.7 165 47.9
CAN.G2012.3 Capsicum annuum HOM05D004104 ORTHO05D004755 7.5e-22 107.8 89 67.4
Duzib138G1233 Durio zibethinus HOM05D004104 ORTHO05D004755 9.8e-22 107.5 157 49.0
Dinv34620 Davidia involucrata HOM05D004104 ORTHO05D004755 4.9e-21 105.1 161 44.7
Thhalv10002280m.g Eutrema salsugineum HOM05D004104 ORTHO05D004755 3.5e-19 99.0 95 61.1
MCO10G151 Micromonas commoda HOM05D004104 ORTHO05D004755 4.3e-17 92.0 77 58.4
Thhalv10029502m.g Eutrema salsugineum HOM05D004104 ORTHO05D004755 3.6e-16 89.0 89 57.3
CAN.G896.9 Capsicum annuum HOM05D004104 ORTHO05D004755 1.2e-14 84.0 86 58.1
Gohir.D03G080833 Gossypium hirsutum HOM05D004104 ORTHO05D004755 3.4e-14 82.4 59 67.8
Gorai.003G083000 Gossypium raimondii HOM05D004104 ORTHO05D004755 1.3e-13 80.5 59 67.8
PRCOL_00002727 Prasinoderma coloniale HOM05D004104 ORTHO05D004755 2.2e-13 79.7 83 45.8
Zm00001eb188390 Zea mays HOM05D004104 ORTHO05D004755 1.4e-12 77.0 60 63.3
Actinidia11346 Actinidia chinensis HOM05D004104 ORTHO05D004755 3.0e-10 69.3 66 56.1
THA.LOC104825261 Tarenaya hassleriana HOM05D013951 ORTHO05D021024 6.2e-08 61.6 56 57.1
Aqoxy2G03647 Aquilegia oxysepala HOM05D004104 ORTHO05D004755 1.1e-07 60.8 91 47.3
arahy.Tifrunner.gnm1.ann1.A8QM82 Arachis hypogaea HOM05D004104 ORTHO05D004755 2.3e-07 59.7 44 63.6


User provided reference genes

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