Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p014723 Quercus lobata HOM05D006316 ORTHO05D008032 1.0e-131 473.4 240 100.0
CiPaw.01G127100 Carya illinoinensis HOM05D006316 ORTHO05D008032 8.5e-118 427.2 240 87.1
Ciclev10005749m.g Citrus clementina HOM05D006316 ORTHO05D008032 5.3e-112 407.9 240 85.0
GSVIVG01017710001 Vitis vinifera HOM05D006316 ORTHO05D008032 3.5e-111 405.2 240 84.2
arahy.Tifrunner.gnm1.ann1.NEV66G Arachis hypogaea HOM05D006316 ORTHO05D008032 4.5e-111 404.8 240 82.9
arahy.Tifrunner.gnm1.ann1.ZN6V8N Arachis hypogaea HOM05D006316 ORTHO05D008032 4.5e-111 404.8 240 82.9
Glyma.13G117200 Glycine max HOM05D006316 ORTHO05D008032 1.3e-110 403.3 240 82.9
CsaV3_3G015610 Cucumis sativus L. HOM05D006316 ORTHO05D008032 2.2e-110 402.5 240 82.9
VMungo1215G0091 Vigna mungo HOM05D006316 ORTHO05D008032 2.2e-110 402.5 240 82.9
MELO3C006760.2 Cucumis melo HOM05D006316 ORTHO05D008032 8.5e-110 400.6 240 82.5
Phvul.003G124500 Phaseolus vulgaris HOM05D006316 ORTHO05D008032 1.9e-109 399.4 240 81.7
DCAR_002560 Daucus carota HOM05D006316 ORTHO05D008032 4.2e-109 398.3 230 83.5
Lj4g0011706 Lotus japonicus HOM05D006316 ORTHO05D008032 9.4e-109 397.1 240 82.1
Medtr4g124260 Medicago truncatula HOM05D006316 ORTHO05D008032 1.2e-108 396.7 240 80.8
Manes.05G122900 Manihot esculenta HOM05D006316 ORTHO05D008032 1.6e-108 396.4 232 84.5
PGR031G3724 Punica granatum HOM05D006316 ORTHO05D008032 2.7e-108 395.6 240 82.1
ClCG05G006940 Citrullus lanatus HOM05D006316 ORTHO05D008032 4.7e-108 394.8 252 79.0
Nn4g25293 Nelumbo nucifera HOM05D006316 ORTHO05D008032 4.7e-108 394.8 240 81.2
Sed0018318 Sechium edule HOM05D006316 ORTHO05D008032 4.7e-108 394.8 240 81.2
Haze_00749 Corylus avellana HOM05D006316 ORTHO05D008032 6.1e-108 394.4 221 88.2
Thhalv10021423m.g Eutrema salsugineum HOM05D006316 ORTHO05D008032 1.0e-107 393.7 240 78.8
TWI74G1230 Tripterygium wilfordii HOM05D006316 ORTHO05D008032 1.4e-107 393.3 240 82.5
Cc07_g19930 Coffea canephora HOM05D006316 ORTHO05D008032 2.3e-107 392.5 232 83.2
Carub.0003s1730 Capsella rubella HOM05D006316 ORTHO05D008032 3.0e-107 392.1 240 80.0
Atru.chr4.3188 Acer truncatum HOM05D006316 ORTHO05D008032 4.0e-107 391.7 240 80.0
CSS0037556 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 4.0e-107 391.7 236 81.4
CARHR092900 Cardamine hirsuta HOM05D006316 ORTHO05D008032 4.0e-107 391.7 240 78.3
CSS0049495 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 5.2e-107 391.3 236 81.4
Sp3g15720 Schrenkiella parvula HOM05D006316 ORTHO05D008032 5.2e-107 391.3 240 78.3
CAN.G255.2 Capsicum annuum HOM05D006316 ORTHO05D008032 6.8e-107 391.0 231 83.1
Lalb_Chr12g0200491 Lupinus albus HOM05D006316 ORTHO05D008032 6.8e-107 391.0 247 79.4
MSTRG.20325 Avicennia marina HOM05D006316 ORTHO05D008032 2.6e-106 389.0 232 80.6
SalBow7G1663 Salvia bowleyana HOM05D006316 ORTHO05D008032 2.6e-106 389.0 234 80.8
AT3G17590 Arabidopsis thaliana HOM05D006316 ORTHO05D008032 5.7e-106 387.9 231 80.1
Actinidia24554 Actinidia chinensis HOM05D006316 ORTHO05D008032 7.5e-106 387.5 228 84.2
AL3G30660 Arabidopsis lyrata HOM05D006316 ORTHO05D008032 9.8e-106 387.1 231 80.5
Lj6A704G50 Lonicera japonica HOM05D006316 ORTHO05D008032 9.8e-106 387.1 240 78.3
BraA05t22055Z Brassica rapa HOM05D006316 ORTHO05D008032 1.3e-105 386.7 231 79.7
A05p32260 Brassica napus HOM05D006316 ORTHO05D008032 1.7e-105 386.3 231 79.7
Duzib128G0584 Durio zibethinus HOM05D006316 ORTHO05D008032 2.2e-105 386.0 240 78.3
Gohir.D05G000900 Gossypium hirsutum HOM05D006316 ORTHO05D008032 2.2e-105 386.0 240 77.5
Gorai.009G000800 Gossypium raimondii HOM05D006316 ORTHO05D008032 2.2e-105 386.0 240 77.5
Migut.B00749 Erythranthe guttata HOM05D006316 ORTHO05D008032 3.7e-105 385.2 229 81.7
BcaB06g25834 Brassica carinata HOM05D006316 ORTHO05D008032 4.8e-105 384.8 240 77.1
Lsat_1_v5_gn_6_117760 Lactuca sativa HOM05D006316 ORTHO05D008032 4.8e-105 384.8 232 80.2
CANSAT56G2492 Cannabis sativa HOM05D006316 ORTHO05D008032 8.3e-105 384.0 242 80.6
Gohir.A05G000600 Gossypium hirsutum HOM05D006316 ORTHO05D008032 1.1e-104 383.6 240 77.1
Aa31LG8G4460 Aethionema arabicum HOM05D006316 ORTHO05D008032 2.4e-104 382.5 240 76.7
C05p48790 Brassica napus HOM05D006316 ORTHO05D008032 2.4e-104 382.5 240 76.2
BolC5t33616H Brassica oleracea HOM05D006316 ORTHO05D008032 2.4e-104 382.5 240 76.2
Eucgr.B02199 Eucalyptus grandis HOM05D006316 ORTHO05D008032 3.1e-104 382.1 240 77.5
BcaC05g28772 Brassica carinata HOM05D006316 ORTHO05D008032 4.1e-104 381.7 240 76.2
Peaxi162Scf00571g00412 Petunia axillaris HOM05D006316 ORTHO05D008032 5.4e-104 381.3 231 80.1
Sopen11g008410 Solanum pennellii HOM05D006316 ORTHO05D008032 9.1e-104 380.6 236 80.9
Hund12266 Selenicereus undatus HOM05D006316 ORTHO05D008032 1.2e-103 380.2 240 78.8
Nitab4.5_0000051g0260 Nicotiana tabacum HOM05D006316 ORTHO05D008032 4.5e-103 378.3 231 81.8
Nitab4.5_0004737g0050 Nicotiana tabacum HOM05D006316 ORTHO05D008032 1.7e-102 376.3 231 81.4
Potri.010G004100 Populus trichocarpa HOM05D006316 ORTHO05D008032 2.2e-102 375.9 241 77.6
COL.COLO4_13438 Corchorus olitorius HOM05D006316 ORTHO05D008032 8.5e-102 374.0 236 77.1
Gohir.A09G135800 Gossypium hirsutum HOM05D006316 ORTHO05D008032 1.1e-101 373.6 238 75.6
MD13G1137100 Malus domestica HOM05D006316 ORTHO05D008032 1.5e-101 373.2 240 75.8
vmacro04190 Vaccinium macrocarpon HOM05D006316 ORTHO05D008032 1.9e-101 372.9 261 73.6
SGA_v2.0_scaffold131G34373 Striga asiatica HOM05D006316 ORTHO05D008032 5.5e-101 371.3 262 71.8
TPR.G12708 Trifolium pratense HOM05D006316 ORTHO05D008032 5.5e-101 371.3 223 80.3
TAR365G1184 Trochodendron aralioides HOM05D006316 ORTHO05D008032 9.5e-101 370.5 263 72.6
HanXRQChr05g0148931 Helianthus annuus HOM05D006316 ORTHO05D008032 2.8e-100 369.0 232 77.2
Ah.07g202850 Amaranthus hybridus HOM05D006316 ORTHO05D008032 8.0e-100 367.5 240 75.0
Aqoxy2G02444 Aquilegia oxysepala HOM05D006316 ORTHO05D008032 1.4e-99 366.7 229 76.4
AUR62002525 Chenopodium quinoa HOM05D006316 ORTHO05D008032 1.4e-99 366.7 240 75.8
ECA246G2315 Erigeron canadensis HOM05D006316 ORTHO05D008032 1.4e-99 366.7 224 80.4
EL10Ac3g06220 Beta vulgaris HOM05D006316 ORTHO05D008032 5.2e-99 364.8 237 74.7
unitig_578.g15959 Utricularia gibba HOM05D006316 ORTHO05D008032 2.0e-98 362.8 242 74.0
Cfa015754 Carpinus fangiana HOM05D006316 ORTHO05D008032 7.5e-98 360.9 209 85.6
PSO210G4075 Papaver somniferum HOM05D006316 ORTHO05D008032 1.7e-97 359.8 241 75.1
PSO761G0163 Papaver somniferum HOM05D006316 ORTHO05D008032 1.7e-97 359.8 241 75.1
Gohir.D09G137500 Gossypium hirsutum HOM05D006316 ORTHO05D008032 3.7e-97 358.6 261 68.6
ATR0796G033 Amborella trichopoda HOM05D006316 ORTHO05D008032 8.3e-97 357.5 234 73.5
Psat4g020720 Pisum sativum HOM05D006316 ORTHO05D008032 4.1e-96 355.1 240 74.6
CDE12G0513 Ceratophyllum demersum HOM05D006316 ORTHO05D008032 9.2e-96 354.0 238 73.1
RcHm_v2.0_Chr4g0428001 Rosa chinensis HOM05D006316 ORTHO05D008032 1.2e-95 353.6 227 74.9
FvH4_4g21770 Fragaria vesca HOM05D006316 ORTHO05D008032 7.8e-95 350.9 227 74.4
FAN17G2953 Fragaria x ananassa HOM05D006316 ORTHO05D008032 2.3e-94 349.4 227 74.0
Sabra10G0003500 Salix brachista HOM05D006316 ORTHO05D008032 3.8e-94 348.6 282 65.6
CSS0010190 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 8.6e-94 347.4 233 76.4
THA.LOC104826519 Tarenaya hassleriana HOM05D006316 ORTHO05D008032 1.5e-93 346.7 210 81.4
Sopen11g008420 Solanum pennellii HOM05D006316 ORTHO05D008032 5.6e-93 344.7 238 73.9
Thecc.03G258800 Theobroma cacao HOM05D006316 ORTHO05D008032 3.6e-92 342.0 240 72.1
FAN12G0215 Fragaria x ananassa HOM05D006316 ORTHO05D008032 5.2e-91 338.2 249 67.9
FAN07G2419 Fragaria x ananassa HOM05D006316 ORTHO05D008032 1.7e-89 333.2 258 65.1
Gorai.006G157900 Gossypium raimondii HOM05D006316 ORTHO05D008032 2.1e-84 316.2 232 69.0
Prupe.1G208100 Prunus persica HOM05D006316 ORTHO05D008032 8.9e-83 310.8 195 77.9
Solyc11g013400.3 Solanum lycopersicum HOM05D006316 ORTHO05D008032 2.0e-82 309.7 195 79.5
Zm00001eb354530 Zea mays HOM05D006316 ORTHO05D008032 6.4e-81 304.7 234 63.7
Os02g0723700 Oryza sativa ssp. japonica HOM05D006316 ORTHO05D008032 1.9e-80 303.1 226 64.6
TAR362G1307 Trochodendron aralioides HOM05D006316 ORTHO05D008032 4.6e-79 298.5 193 76.2
Rhsim13G0235700 Rhododendron simsii HOM05D006316 ORTHO05D008032 6.6e-78 294.7 275 60.0
SHI09041 Sapria himalayana HOM05D006316 ORTHO05D008032 8.6e-78 294.3 211 70.1
Dinv32178 Davidia involucrata HOM05D006316 ORTHO05D008032 5.2e-75 285.0 231 65.4
Sc19g0002500 Simmondsia chinensis HOM05D006316 ORTHO05D008032 7.1e-72 274.6 177 76.8
Rhsim04G0168500 Rhododendron simsii HOM05D006316 ORTHO05D008032 1.0e-70 270.8 196 71.9
AUR62023666 Chenopodium quinoa HOM05D006316 ORTHO05D008032 3.9e-70 268.9 306 50.3
Mapoly0059s0054 Marchantia polymorpha HOM05D006316 ORTHO05D008032 2.8e-68 262.7 230 56.1
Lj2g0021665 Lotus japonicus HOM05D006316 ORTHO05D008032 8.9e-67 257.7 231 60.6
AagrBONN_evm.TU.Sc2ySwM_228.3212 Anthoceros agrestis HOM05D006316 ORTHO05D008032 1.6e-63 246.9 225 54.2
HPP92_002633 Vanilla planifolia HOM05D006316 ORTHO05D008032 2.7e-63 246.1 160 73.8
SMO358G0571 Selaginella moellendorffii HOM05D006316 ORTHO05D008032 6.0e-63 245.0 221 53.8
LjContig00575g0004232 Lotus japonicus HOM05D006316 ORTHO05D008032 3.0e-62 242.7 184 66.8
LjContig00576g0014419 Lotus japonicus HOM05D006316 ORTHO05D008032 3.0e-62 242.7 184 66.8
Lj2g0021371 Lotus japonicus HOM05D006316 ORTHO05D008032 1.9e-61 240.0 156 75.0
Rhsim04G0168300 Rhododendron simsii HOM05D006316 ORTHO05D008032 2.0e-58 229.9 196 64.3
CBR_g38190 Chara braunii HOM05D006316 ORTHO05D008032 1.0e-54 217.6 221 48.9
Ca_21361_v3 Cicer arietinum L. HOM05D006316 ORTHO05D008032 3.5e-47 192.6 122 78.7
SEGI_01321 Sequoiadendron giganteum HOM05D006316 ORTHO05D008032 3.8e-41 172.6 127 68.5
Glyma.09G159500 Glycine max HOM05D006316 ORTHO05D008032 3.9e-38 162.5 162 55.6
PGSC0003DMG400027786 Solanum tuberosum HOM05D006316 ORTHO05D008032 8.7e-38 161.4 118 70.3
CSS0015998 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 6.7e-30 135.2 93 74.2
Glyma.17G042702 Glycine max HOM05D006316 ORTHO05D008032 4.1e-27 125.9 92 68.5
Solyc11g013410.2 Solanum lycopersicum HOM05D006316 ORTHO05D008032 1.7e-25 120.6 90 68.9
Cpa.g.sc146.8 Carica papaya HOM05D006316 ORTHO05D008032 6.5e-25 118.6 63 88.9
MBI18_g03841_MAGBIO Magnolia biondii HOM05D006046 ORTHO05D007580 3.2e-24 116.3 71 73.2
Cpa.g.c44700 Carica papaya HOM05D006316 ORTHO05D008032 7.9e-23 111.7 55 90.9
DCAR_030416 Daucus carota HOM05D006316 ORTHO05D008032 5.7e-21 105.5 102 60.8
Oeu020629.4 Olea europaea HOM05D002546 ORTHO05D002671 3.0e-14 83.2 69 65.2
Cfa025220 Carpinus fangiana HOM05D006316 ORTHO05D008032 3.3e-13 79.7 151 34.4
RcHm_v2.0_Chr5g0025761 Rosa chinensis HOM05D006316 ORTHO05D008032 6.9e-11 72.0 65 58.5


User provided reference genes

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