Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p065593 Quercus lobata HOM05D004814 ORTHO05D005778 2.0e-52 208.8 102 100.0
QL05p065674 Quercus lobata HOM05D004814 ORTHO05D005778 1.1e-47 193.0 102 94.1
Glyma.08G327500 Glycine max HOM05D004814 ORTHO05D005778 2.6e-47 191.8 103 94.2
QL08p004842 Quercus lobata HOM05D004814 ORTHO05D005778 2.6e-47 191.8 103 94.2
Phvul.006G055300 Phaseolus vulgaris HOM05D004814 ORTHO05D005778 3.3e-47 191.4 103 93.2
VMungo0248G0001 Vigna mungo HOM05D004814 ORTHO05D005778 3.3e-47 191.4 103 93.2
Ah.04g166490 Amaranthus hybridus HOM05D004814 ORTHO05D005778 4.4e-47 191.0 103 93.2
Cfa020215 Carpinus fangiana HOM05D004814 ORTHO05D005778 4.4e-47 191.0 103 93.2
AUR62017069 Chenopodium quinoa HOM05D004814 ORTHO05D005778 4.4e-47 191.0 103 93.2
AUR62036421 Chenopodium quinoa HOM05D004814 ORTHO05D005778 4.4e-47 191.0 103 93.2
AUR62036427 Chenopodium quinoa HOM05D004814 ORTHO05D005778 4.4e-47 191.0 103 93.2
AUR62040646 Chenopodium quinoa HOM05D004814 ORTHO05D005778 4.4e-47 191.0 103 93.2
Ciclev10009615m.g Citrus clementina HOM05D004814 ORTHO05D005778 4.4e-47 191.0 103 93.2
Haze_09803 Corylus avellana HOM05D004814 ORTHO05D005778 4.4e-47 191.0 103 93.2
DCAR_013223 Daucus carota HOM05D004814 ORTHO05D005778 4.4e-47 191.0 103 93.2
Eucgr.F03697 Eucalyptus grandis HOM05D004814 ORTHO05D005778 4.4e-47 191.0 103 93.2
Lj1P888T30 Lonicera japonica HOM05D004814 ORTHO05D005778 4.4e-47 191.0 103 93.2
Manes.03G139872 Manihot esculenta HOM05D004814 ORTHO05D005778 4.4e-47 191.0 103 93.2
Phvul.001G030600 Phaseolus vulgaris HOM05D004814 ORTHO05D005778 5.7e-47 190.7 103 92.2
PGR031G1774 Punica granatum HOM05D004814 ORTHO05D005778 5.7e-47 190.7 103 93.2
Atru.chr2.3664 Acer truncatum HOM05D004814 ORTHO05D005778 7.4e-47 190.3 103 93.2
Gorai.007G310400 Gossypium raimondii HOM05D004814 ORTHO05D005778 7.4e-47 190.3 103 93.2
Lalb_Chr05g0211691 Lupinus albus HOM05D004814 ORTHO05D005778 7.4e-47 190.3 103 92.2
arahy.Tifrunner.gnm1.ann1.0CA1AM Arachis hypogaea HOM05D004814 ORTHO05D005778 9.7e-47 189.9 103 93.2
arahy.Tifrunner.gnm1.ann1.CWZH2K Arachis hypogaea HOM05D004814 ORTHO05D005778 9.7e-47 189.9 103 93.2
arahy.Tifrunner.gnm1.ann1.RG8M6K Arachis hypogaea HOM05D004814 ORTHO05D005778 9.7e-47 189.9 103 93.2
arahy.Tifrunner.gnm1.ann1.X98J9H Arachis hypogaea HOM05D004814 ORTHO05D005778 9.7e-47 189.9 103 93.2
Glyma.18G079900 Glycine max HOM05D004814 ORTHO05D005778 9.7e-47 189.9 103 93.2
Gohir.D11G287000 Gossypium hirsutum HOM05D004814 ORTHO05D005778 9.7e-47 189.9 102 94.1
Oeu049351.1 Olea europaea HOM05D004814 ORTHO05D005778 9.7e-47 189.9 103 92.2
Oeu057089.1 Olea europaea HOM05D004814 ORTHO05D005778 9.7e-47 189.9 103 92.2
Peaxi162Scf00900g00010 Petunia axillaris HOM05D004814 ORTHO05D005778 9.7e-47 189.9 102 94.1
Aa31LG10G250 Aethionema arabicum HOM05D004814 ORTHO05D005778 1.7e-46 189.1 103 92.2
Aa31LG8G330 Aethionema arabicum HOM05D004814 ORTHO05D005778 1.7e-46 189.1 103 92.2
AL3G24860 Arabidopsis lyrata HOM05D004814 ORTHO05D005778 1.7e-46 189.1 103 92.2
AT3G13120 Arabidopsis thaliana HOM05D004814 ORTHO05D005778 1.7e-46 189.1 103 92.2
EL10Ac4g07605 Beta vulgaris HOM05D004814 ORTHO05D005778 1.7e-46 189.1 103 92.2
BcaB06g25486 Brassica carinata HOM05D004814 ORTHO05D005778 1.7e-46 189.1 103 92.2
BcaC05g29209 Brassica carinata HOM05D004814 ORTHO05D005778 1.7e-46 189.1 103 92.2
BcaNung05270 Brassica carinata HOM05D004814 ORTHO05D005778 1.7e-46 189.1 103 92.2
A01p40420 Brassica napus HOM05D004814 ORTHO05D005778 1.7e-46 189.1 103 92.2
A03p38040 Brassica napus HOM05D004814 ORTHO05D005778 1.7e-46 189.1 103 92.2
A05p36420 Brassica napus HOM05D004814 ORTHO05D005778 1.7e-46 189.1 103 92.2
C03p46130 Brassica napus HOM05D004814 ORTHO05D005778 1.7e-46 189.1 103 92.2
C05p54820 Brassica napus HOM05D004814 ORTHO05D005778 1.7e-46 189.1 103 92.2
BolC5t34154H Brassica oleracea HOM05D004814 ORTHO05D005778 1.7e-46 189.1 103 92.2
BraA01t04077Z Brassica rapa HOM05D004814 ORTHO05D005778 1.7e-46 189.1 103 92.2
BraA03t12957Z Brassica rapa HOM05D004814 ORTHO05D005778 1.7e-46 189.1 103 92.2
BraA05t22442Z Brassica rapa HOM05D004814 ORTHO05D005778 1.7e-46 189.1 103 92.2
Carub.0003s1246 Capsella rubella HOM05D004814 ORTHO05D005778 1.7e-46 189.1 103 92.2
CARHR087710 Cardamine hirsuta HOM05D004814 ORTHO05D005778 1.7e-46 189.1 103 92.2
Cpa.g.sc12.175 Carica papaya HOM05D004814 ORTHO05D005778 1.7e-46 189.1 103 92.2
Thhalv10021566m.g Eutrema salsugineum HOM05D004814 ORTHO05D005778 1.7e-46 189.1 103 92.2
Gohir.A01G090000 Gossypium hirsutum HOM05D004814 ORTHO05D005778 1.7e-46 189.1 102 93.1
Gohir.D01G075300 Gossypium hirsutum HOM05D004814 ORTHO05D005778 1.7e-46 189.1 102 93.1
Gorai.002G098500 Gossypium raimondii HOM05D004814 ORTHO05D005778 1.7e-46 189.1 102 93.1
Sp3g11290 Schrenkiella parvula HOM05D004814 ORTHO05D005778 1.7e-46 189.1 103 92.2
Thecc.07G016800 Theobroma cacao HOM05D004814 ORTHO05D005778 1.7e-46 189.1 102 93.1
Ah.06g181280 Amaranthus hybridus HOM05D004814 ORTHO05D005778 2.2e-46 188.7 103 92.2
BcaC01g04010 Brassica carinata HOM05D004814 ORTHO05D005778 2.2e-46 188.7 103 91.3
BolC3t16886H Brassica oleracea HOM05D004814 ORTHO05D005778 2.2e-46 188.7 103 91.3
Dinv10318 Davidia involucrata HOM05D004814 ORTHO05D005778 2.2e-46 188.7 103 92.2
Dinv40842 Davidia involucrata HOM05D004814 ORTHO05D005778 2.2e-46 188.7 103 92.2
THA.LOC104815700 Tarenaya hassleriana HOM05D004814 ORTHO05D005778 2.2e-46 188.7 103 91.3
THA.LOC104810287 Tarenaya hassleriana HOM05D004814 ORTHO05D005778 2.8e-46 188.3 103 92.2
ATR0624G087 Amborella trichopoda HOM05D004814 ORTHO05D005778 3.7e-46 188.0 103 91.3
CiPaw.12G136400 Carya illinoinensis HOM05D004814 ORTHO05D005778 3.7e-46 188.0 103 92.2
ClCG09G021040 Citrullus lanatus HOM05D004814 ORTHO05D005778 3.7e-46 188.0 103 91.3
MELO3C024899.2 Cucumis melo HOM05D004814 ORTHO05D005778 3.7e-46 188.0 103 91.3
CsaV3_7G018640 Cucumis sativus L. HOM05D004814 ORTHO05D005778 3.7e-46 188.0 103 91.3
Lsat_1_v5_gn_9_90400 Lactuca sativa HOM05D004814 ORTHO05D005778 3.7e-46 188.0 103 91.3
TWI38G0785 Tripterygium wilfordii HOM05D004814 ORTHO05D005778 3.7e-46 188.0 103 91.3
TWI39G1010 Tripterygium wilfordii HOM05D004814 ORTHO05D005778 3.7e-46 188.0 103 91.3
TAR629G3287 Trochodendron aralioides HOM05D004814 ORTHO05D005778 3.7e-46 188.0 103 91.3
CSS0025876 Camellia sinensis var. sinensis HOM05D004814 ORTHO05D005778 4.8e-46 187.6 103 92.2
Gohir.A11G276900 Gossypium hirsutum HOM05D004814 ORTHO05D005778 4.8e-46 187.6 102 92.2
HanXRQChr03g0061321 Helianthus annuus HOM05D004814 ORTHO05D005778 4.8e-46 187.6 103 91.3
HanXRQChr13g0408121 Helianthus annuus HOM05D004814 ORTHO05D005778 4.8e-46 187.6 103 91.3
COL.COLO4_09806 Corchorus olitorius HOM05D004814 ORTHO05D005778 6.3e-46 187.2 102 92.2
Manes.15G061900 Manihot esculenta HOM05D004814 ORTHO05D005778 6.3e-46 187.2 103 91.3
Nn1g03216 Nelumbo nucifera HOM05D004814 ORTHO05D005778 6.3e-46 187.2 103 91.3
Sc16g0007970 Simmondsia chinensis HOM05D004814 ORTHO05D005778 6.3e-46 187.2 103 91.3
GSVIVG01014640001 Vitis vinifera HOM05D004814 ORTHO05D005778 8.2e-46 186.8 103 90.3
Cc05_g14790 Coffea canephora HOM05D004814 ORTHO05D005778 1.4e-45 186.0 103 89.3
Hma1.2p1_0889F.1_g232870 Hydrangea macrophylla HOM05D004814 ORTHO05D005778 1.4e-45 186.0 102 91.2
PSO541G0969 Papaver somniferum HOM05D004814 ORTHO05D005778 1.4e-45 186.0 103 90.3
Potri.011G092800 Populus trichocarpa HOM05D004814 ORTHO05D005778 1.4e-45 186.0 103 90.3
Sabra11G0087000 Salix brachista HOM05D004814 ORTHO05D005778 1.4e-45 186.0 103 90.3
Sabra16G0239200 Salix brachista HOM05D004814 ORTHO05D005778 1.4e-45 186.0 103 90.3
Sed0017349 Sechium edule HOM05D004814 ORTHO05D005778 1.4e-45 186.0 103 90.3
TAR626G1431 Trochodendron aralioides HOM05D004814 ORTHO05D005778 1.4e-45 186.0 102 91.2
Potri.001G365600 Populus trichocarpa HOM05D004814 ORTHO05D005778 2.4e-45 185.3 103 89.3
THA.LOC104822735 Tarenaya hassleriana HOM05D004814 ORTHO05D005778 2.4e-45 185.3 103 90.3
A01p40680 Brassica napus HOM05D004814 ORTHO05D005778 3.1e-45 184.9 103 90.3
PSO675G8482 Papaver somniferum HOM05D004814 ORTHO05D005778 3.1e-45 184.9 103 89.3
CANSAT11G0174 Cannabis sativa HOM05D004814 ORTHO05D005778 4.1e-45 184.5 103 89.3
unitig_62.g23297 Utricularia gibba HOM05D004814 ORTHO05D005778 4.1e-45 184.5 102 91.2
Ca_20138_v3 Cicer arietinum L. HOM05D004814 ORTHO05D005778 7.0e-45 183.7 103 89.3
MSTRG.14478 Avicennia marina HOM05D004814 ORTHO05D005778 9.1e-45 183.3 103 89.3
CAN.G492.31 Capsicum annuum HOM05D004814 ORTHO05D005778 9.1e-45 183.3 102 90.2
Solyc10g006030.3 Solanum lycopersicum HOM05D004814 ORTHO05D005778 9.1e-45 183.3 102 90.2
Sopen10g001990 Solanum pennellii HOM05D004814 ORTHO05D005778 9.1e-45 183.3 102 90.2
PGSC0003DMG400014378 Solanum tuberosum HOM05D004814 ORTHO05D005778 9.1e-45 183.3 102 90.2
TPR.G30737 Trifolium pratense HOM05D004814 ORTHO05D005778 9.1e-45 183.3 103 89.3
CSS0019029 Camellia sinensis var. sinensis HOM05D004814 ORTHO05D005778 1.2e-44 183.0 103 90.3
ECA240G4731 Erigeron canadensis HOM05D001580 ORTHO05D001517 1.2e-44 183.0 100 91.0
BraA01t04102Z Brassica rapa HOM05D004814 ORTHO05D005778 1.6e-44 182.6 103 89.3
HPP92_020399 Vanilla planifolia HOM05D004814 ORTHO05D005778 1.6e-44 182.6 102 89.2
FvH4_3g29500 Fragaria vesca HOM05D004814 ORTHO05D005778 2.0e-44 182.2 103 89.3
FAN11G3417 Fragaria x ananassa HOM05D004814 ORTHO05D005778 2.0e-44 182.2 103 89.3
FAN16G2593 Fragaria x ananassa HOM05D004814 ORTHO05D005778 2.0e-44 182.2 103 89.3
FAN21G1289 Fragaria x ananassa HOM05D004814 ORTHO05D005778 2.0e-44 182.2 103 89.3
FAN25G3790 Fragaria x ananassa HOM05D004814 ORTHO05D005778 2.0e-44 182.2 103 89.3
MD03G1187000 Malus domestica HOM05D004814 ORTHO05D005778 2.0e-44 182.2 102 90.2
MD11G1202000 Malus domestica HOM05D004814 ORTHO05D005778 2.0e-44 182.2 102 90.2
Prupe.4G239600 Prunus persica HOM05D004814 ORTHO05D005778 2.0e-44 182.2 102 90.2
RcHm_v2.0_Chr5g0054381 Rosa chinensis HOM05D004814 ORTHO05D005778 2.0e-44 182.2 103 89.3
CDE10G1086 Ceratophyllum demersum HOM05D004814 ORTHO05D005778 2.6e-44 181.8 103 88.3
Hund01909 Selenicereus undatus HOM05D004814 ORTHO05D005778 2.6e-44 181.8 103 88.3
Duzib213G0234 Durio zibethinus HOM05D004814 ORTHO05D005778 3.5e-44 181.4 103 88.3
Nitab4.5_0003491g0010 Nicotiana tabacum HOM05D004814 ORTHO05D005778 4.5e-44 181.0 102 89.2
Nitab4.5_0006756g0010 Nicotiana tabacum HOM05D004814 ORTHO05D005778 4.5e-44 181.0 102 89.2
Aqoxy4G02247 Aquilegia oxysepala HOM05D004814 ORTHO05D005778 5.9e-44 180.6 103 86.4
SGA_v2.0_scaffold8G04398 Striga asiatica HOM05D004814 ORTHO05D005778 7.7e-44 180.3 101 88.1
Actinidia30418 Actinidia chinensis HOM05D004814 ORTHO05D005778 1.3e-43 179.5 100 91.0
Os03g0196800 Oryza sativa ssp. japonica HOM05D004814 ORTHO05D005778 1.7e-43 179.1 103 84.5
vmacro22713 Vaccinium macrocarpon HOM05D004814 ORTHO05D005778 1.7e-43 179.1 101 88.1
Zm00001eb008100 Zea mays HOM05D004814 ORTHO05D005778 1.7e-43 179.1 103 84.5
Actinidia05019 Actinidia chinensis HOM05D004814 ORTHO05D005778 2.2e-43 178.7 100 90.0
Zm00001eb401060 Zea mays HOM05D004814 ORTHO05D005778 2.2e-43 178.7 103 84.5
Actinidia05024 Actinidia chinensis HOM05D004814 ORTHO05D005778 8.5e-43 176.8 100 90.0
Psat5g170120 Pisum sativum HOM05D004814 ORTHO05D005778 1.1e-42 176.4 103 86.4
C01p51960 Brassica napus HOM05D004814 ORTHO05D005778 4.2e-42 174.5 93 91.4
Medtr3g058430 Medicago truncatula HOM05D004814 ORTHO05D005778 7.2e-42 173.7 103 85.4
Rhsim06G0227300 Rhododendron simsii HOM05D004814 ORTHO05D005778 9.4e-42 173.3 102 84.3
MBI19_g45743_MAGBIO Magnolia biondii HOM05D004814 ORTHO05D005778 1.4e-40 169.5 100 84.0
AagrBONN_evm.TU.Sc2ySwM_117.1321 Anthoceros agrestis HOM05D004814 ORTHO05D005778 1.6e-36 156.0 103 75.7
Mapoly0009s0107 Marchantia polymorpha HOM05D004814 ORTHO05D005778 2.2e-35 152.1 100 75.0
Pp3c20_8830 Physcomitrium patens HOM05D004814 ORTHO05D005778 5.0e-35 151.0 102 74.5
Pp3c24_19230 Physcomitrium patens HOM05D004814 ORTHO05D005778 5.0e-35 151.0 102 74.5
Pp3c8_18990 Physcomitrium patens HOM05D004814 ORTHO05D005778 1.5e-34 149.4 100 75.0
PSO832G2117 Papaver somniferum HOM05D004814 ORTHO05D005778 2.5e-34 148.7 102 73.5
SEGI_32296 Sequoiadendron giganteum HOM05D004814 ORTHO05D005778 8.8e-32 140.2 101 71.3
CBR_g19640 Chara braunii HOM05D004814 ORTHO05D005778 5.7e-31 137.5 101 66.3
SMO228G0012 Selaginella moellendorffii HOM05D004814 ORTHO05D005778 5.5e-26 120.9 101 59.4
MCO07G521 Micromonas commoda HOM05D004814 ORTHO05D005778 1.8e-24 115.9 94 59.6
MSTRG.13015 Avicennia marina HOM05D004814 ORTHO05D005778 1.5e-23 112.8 62 85.5
PRCOL_00000430 Prasinoderma coloniale HOM05D004814 ORTHO05D005778 3.3e-18 95.1 100 49.0
Cre03.g195650 Chlamydomonas reinhardtii HOM05D004814 ORTHO05D005778 3.6e-17 91.7 94 48.9


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