Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p045937 Quercus lobata HOM05D000002 ORTHO05D009184 8.8e-105 383.6 195 100.0
Rhsim01G0134100 Rhododendron simsii HOM05D002709 ORTHO05D000001 3.4e-72 275.4 192 73.4
TAR174G0002 Trochodendron aralioides HOM05D000002 ORTHO05D009184 1.2e-56 223.8 194 59.8
CSS0018210 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.3e-27 125.6 184 38.6
CSS0011631 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.8e-26 122.9 184 37.5
CSS0024584 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.4e-25 119.8 184 37.0
CSS0033242 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-23 113.6 179 35.8
Rhsim07G0156700 Rhododendron simsii HOM05D008917 ORTHO05D010970 5.6e-19 98.6 76 67.1
TAR623G0124 Trochodendron aralioides HOM05D000002 ORTHO05D009184 5.6e-19 98.6 172 29.7
Rhsim10G0106100 Rhododendron simsii HOM05D000474 ORTHO05D003648 7.4e-19 98.2 76 63.2
Dinv09648 Davidia involucrata HOM05D000002 ORTHO05D009184 1.4e-17 94.0 197 29.4
TAR654G0001 Trochodendron aralioides HOM05D000002 ORTHO05D009184 9.0e-17 91.3 198 27.8
Nn2g13203 Nelumbo nucifera HOM05D001889 ORTHO05D000001 2.9e-15 86.3 174 29.9
QL05p080279 Quercus lobata HOM05D000002 ORTHO05D009184 1.1e-14 84.3 200 27.5
QL10p046058 Quercus lobata HOM05D000002 ORTHO05D000001 1.4e-14 84.0 200 27.5
QL02p054488 Quercus lobata HOM05D000002 ORTHO05D000001 1.9e-14 83.6 197 25.9
COL.COLO4_26578 Corchorus olitorius HOM05D000002 ORTHO05D009184 2.7e-13 79.7 179 26.3
PSO384G3605 Papaver somniferum HOM05D000002 ORTHO05D009184 7.9e-13 78.2 197 23.4
Thhalv10029402m.g Eutrema salsugineum HOM05D000002 ORTHO05D009184 6.7e-12 75.1 168 27.4
COL.COLO4_27409 Corchorus olitorius HOM05D000002 ORTHO05D009184 8.7e-12 74.7 182 27.5
PSO832G0651 Papaver somniferum HOM05D000002 ORTHO05D009184 8.7e-12 74.7 171 28.7
Thhalv10001136m.g Eutrema salsugineum HOM05D000002 ORTHO05D009184 1.9e-11 73.6 186 27.4
PSO541G2535 Papaver somniferum HOM05D000002 ORTHO05D009184 1.9e-11 73.6 198 26.3
Thhalv10023107m.g Eutrema salsugineum HOM05D000002 ORTHO05D009184 4.3e-11 72.4 193 24.9
Hma1.2p1_1184F.1_g264870 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.4e-11 71.6 176 26.7
Thhalv10003344m.g Eutrema salsugineum HOM05D000002 ORTHO05D009184 1.3e-10 70.9 173 27.2
HanXRQChr16g0510691 Helianthus annuus HOM05D000002 ORTHO05D009184 2.8e-10 69.7 188 25.5
HanXRQChr11g0327471 Helianthus annuus HOM05D000002 ORTHO05D000001 6.2e-10 68.6 186 28.0
FvH4_1g15230 Fragaria vesca HOM05D000529 ORTHO05D000472 4.0e-09 65.9 191 24.1
ECA232G2802 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.3e-09 65.5 196 27.6
FvH4_3g39132 Fragaria vesca HOM05D000002 ORTHO05D000001 1.2e-08 64.3 172 27.3
ECA246G4381 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.0e-08 63.5 193 24.4
ECA236G4497 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.6e-08 63.2 193 24.4
FvH4_4g27782 Fragaria vesca HOM05D000002 ORTHO05D000001 2.6e-08 63.2 191 23.6
Hma1.2p1_1812F.1_g303650 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.6e-08 63.2 189 24.9
ECA247G2276 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.4e-08 62.8 187 27.3
RcHm_v2.0_Chr5g0070531 Rosa chinensis HOM05D000279 ORTHO05D000957 5.8e-08 62.0 157 24.2
Hma1.2p1_0744F.1_g211835 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.6e-08 61.6 189 24.3
SEGI_38658 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.0e-07 61.2 175 26.9
Thhalv10003350m.g Eutrema salsugineum HOM05D000002 ORTHO05D009184 1.7e-07 60.5 148 25.7
RcHm_v2.0_Chr2g0171331 Rosa chinensis HOM05D000002 ORTHO05D000001 2.2e-07 60.1 193 23.3
PGR044G1020 Punica granatum HOM05D000002 ORTHO05D000001 2.9e-07 59.7 197 23.9
Sopen01g013860 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-07 58.9 171 24.0
Sopen01g023570 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-07 58.9 171 24.0
Sopen02g004110 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-07 58.9 171 24.0
Sopen02g010600 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-07 58.9 171 24.0
Sopen02g011410 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-07 58.9 171 24.0
Sopen03g025750 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-07 58.9 171 24.0
Sopen03g026010 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-07 58.9 171 24.0
Sopen04g008980 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-07 58.9 171 24.0
Sopen04g019200 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-07 58.9 171 24.0
Sopen04g019450 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-07 58.9 171 24.0
Sopen05g015070 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-07 58.9 171 24.0
Sopen05g025610 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-07 58.9 171 24.0
Sopen06g014110 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-07 58.9 171 24.0
Sopen07g016980 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-07 58.9 171 24.0
Sopen07g019520 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-07 58.9 171 24.0
Sopen08g006730 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-07 58.9 171 24.0
Sopen08g012550 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-07 58.9 171 24.0
Sopen08g019410 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-07 58.9 171 24.0
Sopen09g012990 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-07 58.9 171 24.0
Sopen09g024500 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-07 58.9 171 24.0
Sopen09g024770 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-07 58.9 171 24.0
Sopen09g024840 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-07 58.9 171 24.0
Sopen09g025120 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-07 58.9 171 24.0
Sopen09g027550 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-07 58.9 171 24.0
Sopen10g016830 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-07 58.9 171 24.0
Sopen11g010220 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-07 58.9 171 24.0
Sopen12g025120 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-07 58.9 171 24.0
Sopen12g028230 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-07 58.9 171 24.0
SHI06057 Sapria himalayana HOM05D000002 ORTHO05D000001 6.5e-07 58.5 170 27.6
SHI12472 Sapria himalayana HOM05D000002 ORTHO05D000001 6.5e-07 58.5 166 27.1
SHI24358 Sapria himalayana HOM05D000002 ORTHO05D000001 6.5e-07 58.5 166 28.9
SHI25864 Sapria himalayana HOM05D000002 ORTHO05D000001 6.5e-07 58.5 166 27.7
SHI48092 Sapria himalayana HOM05D000002 ORTHO05D000001 6.5e-07 58.5 167 28.1
SHI49041 Sapria himalayana HOM05D000002 ORTHO05D000001 8.4e-07 58.2 166 27.7
SHI49057 Sapria himalayana HOM05D000002 ORTHO05D000001 8.4e-07 58.2 166 27.7
Sopen10g006370 Solanum pennellii HOM05D000006 ORTHO05D000695 8.4e-07 58.2 201 25.4
COL.COLO4_34309 Corchorus olitorius HOM05D000002 ORTHO05D009184 1.1e-06 57.8 178 24.2
Sopen12g016710 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-06 57.8 171 23.4
AL8G34590 Arabidopsis lyrata HOM05D000002 ORTHO05D000001 1.4e-06 57.4 144 25.0
Sopen01g029890 Solanum pennellii HOM05D000006 ORTHO05D000001 1.4e-06 57.4 201 25.4
Sopen05g009060 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-06 57.4 170 24.1
CSS0022698 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-06 57.0 160 25.0
Thhalv10002214m.g Eutrema salsugineum HOM05D000002 ORTHO05D009184 1.9e-06 57.0 123 26.8
RcHm_v2.0_Chr2g0151961 Rosa chinensis HOM05D000002 ORTHO05D000001 1.9e-06 57.0 193 22.8
SHI04528 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-06 57.0 166 27.7
Sopen01g009380 Solanum pennellii HOM05D000006 ORTHO05D000001 1.9e-06 57.0 188 26.6
Sopen08g014110 Solanum pennellii HOM05D000006 ORTHO05D000001 1.9e-06 57.0 201 25.4
Sopen11g021630 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-06 57.0 165 23.0
SHI18841 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-06 56.6 166 27.1
Sopen11g010250 Solanum pennellii HOM05D000006 ORTHO05D000001 2.5e-06 56.6 184 25.5
Sopen12g022020 Solanum pennellii HOM05D000006 ORTHO05D000001 2.5e-06 56.6 201 25.4
CSS0015301 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.2e-06 56.2 163 25.8
SHI17148 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-06 56.2 166 27.7
Sopen09g007750 Solanum pennellii HOM05D000006 ORTHO05D000001 3.2e-06 56.2 201 25.9
Sopen12g016830 Solanum pennellii HOM05D000006 ORTHO05D000695 3.2e-06 56.2 201 24.9
SHI32825 Sapria himalayana HOM05D000002 ORTHO05D000001 4.2e-06 55.8 166 28.3
Sopen00g003320 Solanum pennellii HOM05D000006 ORTHO05D000001 4.2e-06 55.8 184 26.1
Sopen05g025070 Solanum pennellii HOM05D000006 ORTHO05D000001 4.2e-06 55.8 201 25.9
SHI25658 Sapria himalayana HOM05D000002 ORTHO05D000001 5.5e-06 55.5 166 27.1
Sopen10g012090 Solanum pennellii HOM05D000002 ORTHO05D000001 5.5e-06 55.5 171 22.8
Sopen11g022180 Solanum pennellii HOM05D000006 ORTHO05D000001 5.5e-06 55.5 201 24.9
Sopen00g003600 Solanum pennellii HOM05D000006 ORTHO05D000001 7.1e-06 55.1 201 24.9
Sopen05g026380 Solanum pennellii HOM05D000006 ORTHO05D000001 7.1e-06 55.1 201 25.4
Sopen10g025440 Solanum pennellii HOM05D000006 ORTHO05D000001 7.1e-06 55.1 201 25.4
Sopen01g014320 Solanum pennellii HOM05D000006 ORTHO05D000001 9.3e-06 54.7 201 24.4
Sopen01g021190 Solanum pennellii HOM05D000006 ORTHO05D000001 9.3e-06 54.7 184 26.6
Sopen07g025340 Solanum pennellii HOM05D000006 ORTHO05D000001 9.3e-06 54.7 201 24.9
Sopen10g024290 Solanum pennellii HOM05D000006 ORTHO05D000001 9.3e-06 54.7 201 24.4
Sopen11g020980 Solanum pennellii HOM05D000006 ORTHO05D000001 9.3e-06 54.7 201 23.4


User provided reference genes

Program Settings