Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p039836 Quercus lobata HOM05D006296 ORTHO05D007777 1.1e-80 303.1 136 100.0
Duzib235G1545 Durio zibethinus HOM05D006296 ORTHO05D007777 8.7e-59 230.3 142 76.8
Cfa000430 Carpinus fangiana HOM05D006296 ORTHO05D007777 1.9e-58 229.2 136 77.9
MD10G1295500 Malus domestica HOM05D006296 ORTHO05D007777 4.3e-58 228.0 136 76.5
CsaV3_6G050070 Cucumis sativus L. HOM05D006296 ORTHO05D007777 1.2e-57 226.5 138 72.5
Duzib160G0870 Durio zibethinus HOM05D006296 ORTHO05D007777 2.8e-57 225.3 138 75.4
MELO3C007289.2 Cucumis melo HOM05D006296 ORTHO05D007777 4.7e-57 224.6 138 71.7
Manes.16G026200 Manihot esculenta HOM05D006296 ORTHO05D007777 6.2e-57 224.2 142 72.5
RcHm_v2.0_Chr5g0008131 Rosa chinensis HOM05D006296 ORTHO05D007777 1.4e-56 223.0 136 75.0
Dinv07546 Davidia involucrata HOM05D006296 ORTHO05D007777 1.8e-56 222.6 141 73.8
FvH4_3g09420 Fragaria vesca HOM05D006296 ORTHO05D007777 3.1e-56 221.9 136 75.0
FAN21G3093 Fragaria x ananassa HOM05D006296 ORTHO05D007777 4.0e-56 221.5 136 73.5
Thecc.06G189800 Theobroma cacao HOM05D006296 ORTHO05D007777 4.0e-56 221.5 138 74.6
HanXRQChr01g0003901 Helianthus annuus HOM05D006296 ORTHO05D007777 1.5e-55 219.5 137 71.5
Psat7g112640 Pisum sativum HOM05D006296 ORTHO05D007777 2.0e-55 219.2 137 70.8
Lj6g0008813 Lotus japonicus HOM05D006296 ORTHO05D007777 3.4e-55 218.4 136 70.6
MD05G1314200 Malus domestica HOM05D006296 ORTHO05D007777 4.4e-55 218.0 136 73.5
Hma1.2p1_0126F.1_g059310 Hydrangea macrophylla HOM05D006296 ORTHO05D007777 1.7e-54 216.1 146 69.2
Nitab4.5_0013250g0030 Nicotiana tabacum HOM05D006296 ORTHO05D007777 1.7e-54 216.1 142 67.6
Lalb_Chr16g0383701 Lupinus albus HOM05D006296 ORTHO05D007777 2.2e-54 215.7 137 71.5
Nn1g04048 Nelumbo nucifera HOM05D006296 ORTHO05D007777 2.9e-54 215.3 136 72.8
Nitab4.5_0003942g0060 Nicotiana tabacum HOM05D006296 ORTHO05D007777 2.9e-54 215.3 142 68.3
Lsat_1_v5_gn_1_126121 Lactuca sativa HOM05D006296 ORTHO05D007777 8.4e-54 213.8 136 70.6
FAN11G0154 Fragaria x ananassa HOM05D006296 ORTHO05D007777 1.4e-53 213.0 144 69.4
FAN08G1739 Fragaria x ananassa HOM05D006296 ORTHO05D007777 3.2e-53 211.8 132 72.7
Phvul.006G187000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 3.2e-53 211.8 136 69.1
TWI38G1090 Tripterygium wilfordii HOM05D006296 ORTHO05D007777 3.2e-53 211.8 143 67.8
Medtr4g088930 Medicago truncatula HOM05D006296 ORTHO05D007777 4.2e-53 211.5 147 64.6
CiPaw.10G047400 Carya illinoinensis HOM05D006296 ORTHO05D007777 7.1e-53 210.7 136 71.3
Glyma.13G180700 Glycine max HOM05D006296 ORTHO05D007777 9.3e-53 210.3 139 69.1
CiPaw.09G058300 Carya illinoinensis HOM05D006296 ORTHO05D007777 1.6e-52 209.5 136 70.6
Gohir.A06G126500 Gossypium hirsutum HOM05D006296 ORTHO05D007777 2.1e-52 209.1 143 69.2
Gohir.D06G131300 Gossypium hirsutum HOM05D006296 ORTHO05D007777 2.1e-52 209.1 143 69.2
Gorai.010G153200 Gossypium raimondii HOM05D006296 ORTHO05D007777 2.1e-52 209.1 143 69.2
EL10Ac8g20365 Beta vulgaris HOM05D006296 ORTHO05D007777 2.7e-52 208.8 136 65.4
TPR.G12044 Trifolium pratense HOM05D006296 ORTHO05D007777 2.7e-52 208.8 136 66.9
THA.LOC104812881 Tarenaya hassleriana HOM05D006296 ORTHO05D007777 3.5e-52 208.4 138 68.1
Prupe.4G044900 Prunus persica HOM05D006296 ORTHO05D007777 4.6e-52 208.0 142 70.4
ECA247G1807 Erigeron canadensis HOM05D006296 ORTHO05D007777 1.0e-51 206.8 136 68.4
Eucgr.D00634 Eucalyptus grandis HOM05D006296 ORTHO05D007777 1.0e-51 206.8 136 68.4
arahy.Tifrunner.gnm1.ann1.6I4RI9 Arachis hypogaea HOM05D006296 ORTHO05D007777 1.3e-51 206.5 136 66.9
Cc02_g13190 Coffea canephora HOM05D006296 ORTHO05D007777 1.3e-51 206.5 143 65.0
Potri.004G041700 Populus trichocarpa HOM05D006296 ORTHO05D007777 3.0e-51 205.3 142 64.8
Aqoxy1G02520 Aquilegia oxysepala HOM05D006296 ORTHO05D007777 3.9e-51 204.9 140 65.0
Hund21232 Selenicereus undatus HOM05D006296 ORTHO05D007777 5.1e-51 204.5 138 64.5
CSS0006104 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 6.6e-51 204.1 109 78.0
VMungo0251G3500 Vigna mungo HOM05D006296 ORTHO05D007777 6.6e-51 204.1 138 68.1
Glyma.07G195600 Glycine max HOM05D006296 ORTHO05D007777 1.5e-50 203.0 141 66.7
Ca_18536_v3 Cicer arietinum L. HOM05D006296 ORTHO05D007777 2.5e-50 202.2 105 77.1
FAN18G2724 Fragaria x ananassa HOM05D006296 ORTHO05D007777 4.3e-50 201.4 148 64.9
BcaC09g51212 Brassica carinata HOM05D006296 ORTHO05D007777 5.6e-50 201.1 136 64.0
A01p13040 Brassica napus HOM05D006296 ORTHO05D007777 5.6e-50 201.1 136 64.0
C01p15710 Brassica napus HOM05D006296 ORTHO05D007777 5.6e-50 201.1 136 64.0
BolC1t01524H Brassica oleracea HOM05D006296 ORTHO05D007777 5.6e-50 201.1 136 64.0
BraA01t01246Z Brassica rapa HOM05D006296 ORTHO05D007777 5.6e-50 201.1 136 64.0
Solyc10g009040.4 Solanum lycopersicum HOM05D006296 ORTHO05D007777 9.6e-50 200.3 142 64.8
Sopen10g004820 Solanum pennellii HOM05D006296 ORTHO05D007777 9.6e-50 200.3 142 64.8
Sp7g19880 Schrenkiella parvula HOM05D006296 ORTHO05D007777 2.8e-49 198.7 136 63.2
SGA_v2.0_scaffold49G18290 Striga asiatica HOM05D006296 ORTHO05D007777 4.8e-49 198.0 118 74.6
Sc05g0007770 Simmondsia chinensis HOM05D006296 ORTHO05D007777 6.2e-49 197.6 136 62.5
CANSAT35G0041 Cannabis sativa HOM05D006296 ORTHO05D007777 2.4e-48 195.7 136 66.9
Thhalv10026538m.g Eutrema salsugineum HOM05D006296 ORTHO05D007777 2.4e-48 195.7 136 63.2
BcaNung00841 Brassica carinata HOM05D006296 ORTHO05D007777 3.1e-48 195.3 145 61.4
BcaNung00839 Brassica carinata HOM05D006296 ORTHO05D007777 5.3e-48 194.5 145 60.0
PSO675G2929 Papaver somniferum HOM05D006296 ORTHO05D007777 6.9e-48 194.1 138 65.9
A03p52890 Brassica napus HOM05D006296 ORTHO05D007777 1.2e-47 193.4 142 60.6
BraA03t14365Z Brassica rapa HOM05D006296 ORTHO05D007777 1.2e-47 193.4 142 60.6
BcaC06g30674 Brassica carinata HOM05D006296 ORTHO05D007777 3.4e-47 191.8 142 60.6
MSTRG.15892 Avicennia marina HOM05D006296 ORTHO05D007777 4.5e-47 191.4 122 67.2
HPP92_014805 Vanilla planifolia HOM05D006296 ORTHO05D007777 4.5e-47 191.4 142 62.7
SEGI_22799 Sequoiadendron giganteum HOM05D006296 ORTHO05D007777 9.9e-47 190.3 136 61.8
PGR004G1731 Punica granatum HOM05D006296 ORTHO05D007777 1.3e-46 189.9 136 65.4
Rhsim13G0176800 Rhododendron simsii HOM05D006296 ORTHO05D007777 6.4e-46 187.6 151 60.3
Carub.0007s1968 Capsella rubella HOM05D006296 ORTHO05D007777 8.4e-46 187.2 139 59.0
VMungo0540G1954 Vigna mungo HOM05D006296 ORTHO05D007777 8.4e-46 187.2 153 59.5
BcaNung02241 Brassica carinata HOM05D006296 ORTHO05D007777 1.1e-45 186.8 132 61.4
CARHR228450 Cardamine hirsuta HOM05D006296 ORTHO05D007777 2.4e-45 185.7 138 58.0
AL7G32220 Arabidopsis lyrata HOM05D006296 ORTHO05D007777 5.4e-45 184.5 142 57.7
Os04g0680300 Oryza sativa ssp. japonica HOM05D006296 ORTHO05D007777 5.4e-45 184.5 138 58.0
Atru.chr10.1908 Acer truncatum HOM05D006296 ORTHO05D007777 7.1e-45 184.1 140 62.1
AT4G21720 Arabidopsis thaliana HOM05D006296 ORTHO05D007777 7.1e-45 184.1 139 58.3
Nn1g06589 Nelumbo nucifera HOM05D006296 ORTHO05D007777 1.6e-44 183.0 91 85.7
Peaxi162Scf00530g00219 Petunia axillaris HOM05D006296 ORTHO05D007777 1.6e-44 183.0 182 50.0
Nitab4.5_0002158g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 6.0e-44 181.0 118 66.9
Aa31LG6G3700 Aethionema arabicum HOM05D006296 ORTHO05D007777 7.9e-44 180.6 156 55.1
Migut.M01153 Erythranthe guttata HOM05D006296 ORTHO05D007777 1.3e-43 179.9 142 59.2
DCAR_018474 Daucus carota HOM05D006296 ORTHO05D007777 8.7e-43 177.2 119 68.9
SalBow7G3743 Salvia bowleyana HOM05D006296 ORTHO05D007777 1.1e-42 176.8 165 52.1
unitig_22.g6746 Utricularia gibba HOM05D006296 ORTHO05D007777 2.5e-42 175.6 139 56.1
Solyc02g078430.3 Solanum lycopersicum HOM05D006296 ORTHO05D007777 5.6e-42 174.5 109 64.2
Sopen02g023280 Solanum pennellii HOM05D006296 ORTHO05D007777 9.6e-42 173.7 109 64.2
Zm00001eb065930 Zea mays HOM05D006296 ORTHO05D007777 2.8e-41 172.2 142 55.6
PSO541G0808 Papaver somniferum HOM05D006296 ORTHO05D007777 8.1e-41 170.6 179 50.8
Phvul.002G228000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 8.1e-41 170.6 139 59.0
CAN.G1164.13 Capsicum annuum HOM05D006296 ORTHO05D007777 2.6e-39 165.6 111 63.1
Sed0007841 Sechium edule HOM05D006296 ORTHO05D007777 4.5e-39 164.9 122 62.3
Nitab4.5_0005954g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 8.4e-38 160.6 109 63.3
Ciclev10017521m.g Citrus clementina HOM05D006296 ORTHO05D007777 7.1e-37 157.5 78 84.6
Migut.H01493 Erythranthe guttata HOM05D006296 ORTHO05D007777 3.5e-36 155.2 119 52.1
Lj2A287T56 Lonicera japonica HOM05D006296 ORTHO05D007777 4.6e-36 154.8 116 63.8
Oeu005074.1 Olea europaea HOM05D006296 ORTHO05D007777 2.3e-35 152.5 124 62.9
ATR0680G190 Amborella trichopoda HOM05D006296 ORTHO05D007777 3.0e-35 152.1 110 62.7
Peaxi162Scf00736g00313 Petunia axillaris HOM05D006296 ORTHO05D007777 3.0e-35 152.1 122 58.2
Sabra11G0035100 Salix brachista HOM05D006296 ORTHO05D007777 3.9e-35 151.8 148 52.7
arahy.Tifrunner.gnm1.ann1.F25ZWM Arachis hypogaea HOM05D006296 ORTHO05D007777 6.7e-35 151.0 78 78.2
Actinidia25618 Actinidia chinensis HOM05D006296 ORTHO05D007777 4.8e-33 144.8 90 72.2
ClCG00G005210 Citrullus lanatus HOM05D006296 ORTHO05D007777 1.5e-31 139.8 94 69.1
ClCG01G022900 Citrullus lanatus HOM05D006296 ORTHO05D007777 1.5e-31 139.8 94 69.1
GSVIVG01002932001 Vitis vinifera HOM05D006296 ORTHO05D007777 2.6e-31 139.0 88 70.5
FvH4_5g20990 Fragaria vesca HOM05D006296 ORTHO05D007777 3.4e-31 138.7 98 70.4
Sabra04G0025800 Salix brachista HOM05D006296 ORTHO05D007777 8.4e-30 134.0 97 63.9
Actinidia07582 Actinidia chinensis HOM05D006296 ORTHO05D007777 1.6e-28 129.8 98 64.3
AUR62014802 Chenopodium quinoa HOM05D006296 ORTHO05D007777 3.5e-28 128.6 93 63.4
AUR62016993 Chenopodium quinoa HOM05D006296 ORTHO05D007777 1.1e-26 123.6 93 62.4
COL.COLO4_31494 Corchorus olitorius HOM05D005098 ORTHO05D006646 4.3e-26 121.7 88 68.2
CDE04G3708 Ceratophyllum demersum HOM05D006296 ORTHO05D007777 9.0e-24 114.0 95 58.9
Sed0020533 Sechium edule HOM05D006296 ORTHO05D007777 1.3e-22 110.2 96 54.2
AagrBONN_evm.TU.Sc2ySwM_362.1174 Anthoceros agrestis HOM05D006296 ORTHO05D007777 4.6e-20 101.7 93 45.2
PGSC0003DMG400022442 Solanum tuberosum HOM05D006296 ORTHO05D007777 5.9e-15 84.7 69 52.2
Haze_06487 Corylus avellana HOM05D006296 ORTHO05D007777 6.1e-12 74.7 38 84.2
Cpa.g.sc27.57 Carica papaya HOM05D006296 ORTHO05D007777 8.2e-09 64.3 67 50.7
PGSC0003DMG400022813 Solanum tuberosum HOM05D006296 ORTHO05D007777 3.1e-08 62.4 64 51.6
CSS0025334 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 7.0e-08 61.2 38 71.1
C07p51340 Brassica napus HOM05D006296 ORTHO05D007777 1.3e-06 57.0 89 39.3
MBI18_g17001_MAGBIO Magnolia biondii HOM05D006296 ORTHO05D007777 6.5e-06 54.7 61 49.2


User provided reference genes

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