Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p031619 Quercus lobata HOM05D000840 ORTHO05D000670 4.0e-31 137.5 71 100.0
QL05p033046 Quercus lobata HOM05D000840 ORTHO05D000670 3.2e-28 127.9 67 98.5
QL05p033578 Quercus lobata HOM05D000840 ORTHO05D000670 4.6e-27 124.0 67 97.0
QL05p033176 Quercus lobata HOM05D000840 ORTHO05D000670 2.0e-22 108.6 57 100.0
QL05p031633 Quercus lobata HOM05D000840 ORTHO05D000670 1.7e-18 95.5 74 74.3
QL05p031849 Quercus lobata HOM05D000840 ORTHO05D000670 1.7e-18 95.5 74 74.3
Ciclev10024717m.g Citrus clementina HOM05D000840 ORTHO05D000670 6.6e-18 93.6 68 77.9
CiPaw.01G251200 Carya illinoinensis HOM05D000840 ORTHO05D000670 1.5e-17 92.4 67 74.6
Prupe.6G027500 Prunus persica HOM05D000840 ORTHO05D000670 1.9e-17 92.0 70 72.9
Haze_16613 Corylus avellana HOM05D000840 ORTHO05D000670 4.3e-17 90.9 69 73.9
Manes.11G061900 Manihot esculenta HOM05D000840 ORTHO05D000670 4.3e-17 90.9 67 76.1
Prupe.6G111000 Prunus persica HOM05D000840 ORTHO05D000670 7.3e-17 90.1 71 69.0
Cfa001928 Carpinus fangiana HOM05D000840 ORTHO05D000670 9.5e-17 89.7 69 72.5
Thecc.06G034100 Theobroma cacao HOM05D000840 ORTHO05D000670 1.6e-16 89.0 68 69.1
Thecc.06G034400 Theobroma cacao HOM05D000840 ORTHO05D000670 6.2e-16 87.0 68 67.6
MD11G1036600 Malus domestica HOM05D000840 ORTHO05D000670 8.1e-16 86.7 68 69.1
Manes.04G107400 Manihot esculenta HOM05D000840 ORTHO05D000670 3.1e-15 84.7 66 68.2
Gohir.A05G121700 Gossypium hirsutum HOM05D000840 ORTHO05D000670 8.9e-15 83.2 67 67.2
Gorai.009G126200 Gossypium raimondii HOM05D000840 ORTHO05D000670 1.2e-14 82.8 67 67.2
CiPaw.02G159400 Carya illinoinensis HOM05D000840 ORTHO05D000670 3.4e-14 81.3 66 66.7
Duzib235G0104 Durio zibethinus HOM05D000840 ORTHO05D000670 3.4e-14 81.3 67 65.7
Gohir.D05G122700 Gossypium hirsutum HOM05D000840 ORTHO05D000670 3.4e-14 81.3 67 65.7
Gorai.011G085600 Gossypium raimondii HOM05D000840 ORTHO05D000670 3.4e-14 81.3 65 63.1
CiPaw.02G159300 Carya illinoinensis HOM05D000840 ORTHO05D000670 5.8e-14 80.5 65 66.2
Gohir.A10G072300 Gossypium hirsutum HOM05D000840 ORTHO05D000670 1.3e-13 79.3 65 61.5
Gohir.D10G078800 Gossypium hirsutum HOM05D000840 ORTHO05D000670 2.2e-13 78.6 65 61.5
Hund15769 Selenicereus undatus HOM05D000840 ORTHO05D000670 2.9e-13 78.2 65 61.5
RcHm_v2.0_Chr5g0075871 Rosa chinensis HOM05D000840 ORTHO05D000670 3.7e-13 77.8 71 62.0
MD03G1032600 Malus domestica HOM05D000840 ORTHO05D000670 6.4e-13 77.0 67 64.2
Oeu013039.1 Olea europaea HOM05D000840 ORTHO05D000670 6.4e-13 77.0 67 64.2
Sc14g0004830 Simmondsia chinensis HOM05D000840 ORTHO05D000670 6.4e-13 77.0 66 62.1
Dinv31533 Davidia involucrata HOM05D000840 ORTHO05D000670 1.4e-12 75.9 65 63.1
Duzib160G0548 Durio zibethinus HOM05D000840 ORTHO05D000670 1.4e-12 75.9 67 61.2
Oeu012484.1 Olea europaea HOM05D000840 ORTHO05D000670 1.9e-12 75.5 67 62.7
CANSAT56G1456 Cannabis sativa HOM05D000840 ORTHO05D000670 2.4e-12 75.1 67 67.2
Duzib235G0269 Durio zibethinus HOM05D000840 ORTHO05D000670 2.4e-12 75.1 67 61.2
Duzib235G1450 Durio zibethinus HOM05D000840 ORTHO05D000670 3.2e-12 74.7 67 61.2
FvH4_3g42370 Fragaria vesca HOM05D000840 ORTHO05D000670 7.1e-12 73.6 61 67.2
FAN11G2882 Fragaria x ananassa HOM05D000840 ORTHO05D000670 7.1e-12 73.6 61 67.2
FAN16G1995 Fragaria x ananassa HOM05D000840 ORTHO05D000670 9.2e-12 73.2 61 67.2
FAN21G2894 Fragaria x ananassa HOM05D000840 ORTHO05D000670 9.2e-12 73.2 61 67.2
FAN25G1451 Fragaria x ananassa HOM05D000840 ORTHO05D000670 9.2e-12 73.2 61 67.2
Potri.001G204900 Populus trichocarpa HOM05D000840 ORTHO05D000670 9.2e-12 73.2 68 63.2
Gohir.A10G072400 Gossypium hirsutum HOM05D000840 ORTHO05D000670 1.2e-11 72.8 64 57.8
Eucgr.J00090 Eucalyptus grandis HOM05D000840 ORTHO05D000670 1.6e-11 72.4 67 61.2
Nn2g14599 Nelumbo nucifera HOM05D000840 ORTHO05D000670 1.6e-11 72.4 63 65.1
TWI75G0929 Tripterygium wilfordii HOM05D000840 ORTHO05D000670 1.6e-11 72.4 66 66.7
Duzib235G0353 Durio zibethinus HOM05D000840 ORTHO05D000670 2.1e-11 72.0 67 58.2
Migut.B01095 Erythranthe guttata HOM05D000840 ORTHO05D000670 2.1e-11 72.0 68 60.3
Sabra03G0016100 Salix brachista HOM05D000840 ORTHO05D000670 3.5e-11 71.2 59 67.8
Nitab4.5_0004105g0020 Nicotiana tabacum HOM05D000840 ORTHO05D000670 7.8e-11 70.1 68 55.9
PGR044G1495 Punica granatum HOM05D000840 ORTHO05D000670 7.8e-11 70.1 66 57.6
MD03G1033600 Malus domestica HOM05D000840 ORTHO05D000670 1.0e-10 69.7 58 67.2
Gorai.011G085500 Gossypium raimondii HOM05D000840 ORTHO05D000670 1.3e-10 69.3 64 56.2
MD03G1032700 Malus domestica HOM05D000840 ORTHO05D000670 1.3e-10 69.3 55 61.8
Peaxi162Scf00195g00830 Petunia axillaris HOM05D000840 ORTHO05D000670 1.3e-10 69.3 67 56.7
Gohir.D10G078700 Gossypium hirsutum HOM05D000840 ORTHO05D000670 1.7e-10 68.9 64 54.7
Potri.003G028089 Populus trichocarpa HOM05D000840 ORTHO05D000670 1.7e-10 68.9 67 62.7
Actinidia01692 Actinidia chinensis HOM05D000840 ORTHO05D000670 2.3e-10 68.6 69 56.5
Sabra03G0015900 Salix brachista HOM05D000840 ORTHO05D000670 3.9e-10 67.8 65 61.5
Potri.003G012400 Populus trichocarpa HOM05D000840 ORTHO05D000670 6.6e-10 67.0 67 62.7
vmacro12684 Vaccinium macrocarpon HOM05D000840 ORTHO05D000670 6.6e-10 67.0 61 59.0
HanXRQChr03g0080491 Helianthus annuus HOM05D000840 ORTHO05D000670 8.6e-10 66.6 64 56.2
Solyc04g009500.4 Solanum lycopersicum HOM05D000840 ORTHO05D000670 8.6e-10 66.6 67 53.7
Sopen04g004660 Solanum pennellii HOM05D000840 ORTHO05D000670 8.6e-10 66.6 68 52.9
COL.COLO4_11847 Corchorus olitorius HOM05D000840 ORTHO05D000670 1.9e-09 65.5 65 58.5
PGSC0003DMG400010627 Solanum tuberosum HOM05D000840 ORTHO05D000670 1.9e-09 65.5 68 55.9
Cpa.g.sc14.207 Carica papaya HOM05D000840 ORTHO05D000670 3.3e-09 64.7 65 61.5
ClCG09G013490 Citrullus lanatus HOM05D000840 ORTHO05D000670 3.3e-09 64.7 68 57.4
Hund13419 Selenicereus undatus HOM05D000840 ORTHO05D000670 3.3e-09 64.7 71 53.5
Lj7C492T11 Lonicera japonica HOM05D000840 ORTHO05D000670 7.3e-09 63.5 68 58.8
Ah.10g029760 Amaranthus hybridus HOM05D000840 ORTHO05D000670 1.6e-08 62.4 66 59.1
TWI12G0605 Tripterygium wilfordii HOM05D000840 ORTHO05D000670 1.6e-08 62.4 66 59.1
Rhsim01G0143500 Rhododendron simsii HOM05D000840 ORTHO05D000670 2.8e-08 61.6 61 59.0
CAN.G186.26 Capsicum annuum HOM05D000840 ORTHO05D000670 4.7e-08 60.8 66 53.0
Cpa.g.sc10.131 Carica papaya HOM05D000840 ORTHO05D000670 4.7e-08 60.8 62 61.3
Lalb_Chr01g0012231 Lupinus albus HOM05D000840 ORTHO05D000670 4.7e-08 60.8 64 59.4
Ca_01040_v3 Cicer arietinum L. HOM05D000840 ORTHO05D000670 6.2e-08 60.5 64 62.5
Dinv31992 Davidia involucrata HOM05D000840 ORTHO05D000670 8.1e-08 60.1 77 50.6
Lsat_1_v5_gn_6_15960 Lactuca sativa HOM05D000840 ORTHO05D000670 8.1e-08 60.1 63 57.1
Potri.003G013900 Populus trichocarpa HOM05D000840 ORTHO05D000670 1.1e-07 59.7 66 60.6
Potri.003G028401 Populus trichocarpa HOM05D000840 ORTHO05D000670 1.1e-07 59.7 66 60.6
SGA_v2.0_scaffold172G38982 Striga asiatica HOM05D000840 ORTHO05D000670 1.4e-07 59.3 77 49.4
Lsat_1_v5_gn_5_51740 Lactuca sativa HOM05D000840 ORTHO05D000670 1.8e-07 58.9 62 50.0
SalBow8G4283 Salvia bowleyana HOM05D000840 ORTHO05D000670 1.8e-07 58.9 69 50.7
vmacro21082 Vaccinium macrocarpon HOM05D000840 ORTHO05D000670 2.4e-07 58.5 61 52.5
vmacro21084 Vaccinium macrocarpon HOM05D000840 ORTHO05D000670 3.1e-07 58.2 61 52.5
Cc00_g09670 Coffea canephora HOM05D000840 ORTHO05D000670 4.0e-07 57.8 63 47.6
MBI04_g25415_MAGBIO Magnolia biondii HOM05D000840 ORTHO05D000670 4.0e-07 57.8 66 53.0
Rhsim01G0123000 Rhododendron simsii HOM05D000840 ORTHO05D000670 4.0e-07 57.8 61 54.1
Aqoxy1G00094 Aquilegia oxysepala HOM05D000840 ORTHO05D000670 5.2e-07 57.4 66 50.0
CsaV3_7G006140 Cucumis sativus L. HOM05D000840 ORTHO05D000670 5.2e-07 57.4 68 52.9
Lalb_Chr25g0279141 Lupinus albus HOM05D000840 ORTHO05D000670 5.2e-07 57.4 67 56.7
PSO339G3445 Papaver somniferum HOM05D000840 ORTHO05D000670 6.8e-07 57.0 62 54.8
MBI04_g27246_MAGBIO Magnolia biondii HOM05D000840 ORTHO05D000670 8.9e-07 56.6 65 50.8
Sed0011014 Sechium edule HOM05D000840 ORTHO05D000670 8.9e-07 56.6 68 51.5
DCAR_003830 Daucus carota HOM05D000840 ORTHO05D000670 1.2e-06 56.2 66 48.5
TPR.G37212 Trifolium pratense HOM05D000840 ORTHO05D000670 1.2e-06 56.2 64 59.4
VMungo0331G0091 Vigna mungo HOM05D000840 ORTHO05D000670 1.5e-06 55.8 65 53.8
MSTRG.20451 Avicennia marina HOM05D000840 ORTHO05D000670 2.0e-06 55.5 66 54.5
Medtr2g104400 Medicago truncatula HOM05D000840 ORTHO05D000670 2.0e-06 55.5 65 58.5
arahy.Tifrunner.gnm1.ann1.8F3D8E Arachis hypogaea HOM05D000840 ORTHO05D000670 2.6e-06 55.1 64 57.8
arahy.Tifrunner.gnm1.ann1.E5CV98 Arachis hypogaea HOM05D000840 ORTHO05D000670 2.6e-06 55.1 64 57.8
Lalb_Chr04g0262271 Lupinus albus HOM05D000840 ORTHO05D000670 2.6e-06 55.1 63 57.1
Lalb_Chr24g0395381 Lupinus albus HOM05D000840 ORTHO05D000670 2.6e-06 55.1 66 57.6
PSO384G2259 Papaver somniferum HOM05D000840 ORTHO05D000670 2.6e-06 55.1 62 53.2
THA.LOC104808194 Tarenaya hassleriana HOM05D000840 ORTHO05D000670 2.6e-06 55.1 61 54.1
MSTRG.20450 Avicennia marina HOM05D000840 ORTHO05D000670 3.4e-06 54.7 68 51.5
COL.COLO4_11846 Corchorus olitorius HOM05D000840 ORTHO05D000670 3.4e-06 54.7 66 48.5
SHI11281 Sapria himalayana HOM05D000840 ORTHO05D000670 3.4e-06 54.7 71 50.7
Aa31LG4G800 Aethionema arabicum HOM05D000840 ORTHO05D000670 5.8e-06 53.9 66 47.0
Hma1.2p1_0233F.1_g098240 Hydrangea macrophylla HOM05D000840 ORTHO05D000670 5.8e-06 53.9 61 59.0


User provided reference genes

Program Settings