Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p021375 Quercus lobata HOM05D002908 ORTHO05D007390 1.8e-198 695.7 345 100.0
Cfa002106 Carpinus fangiana HOM05D002908 ORTHO05D007390 2.5e-171 605.5 343 88.3
VMungo0331G0294 Vigna mungo HOM05D002908 ORTHO05D007390 1.9e-163 579.3 327 88.1
Lalb_Chr01g0013051 Lupinus albus HOM05D002908 ORTHO05D007390 2.5e-163 578.9 328 87.8
Phvul.010G147500 Phaseolus vulgaris HOM05D002908 ORTHO05D007390 2.5e-163 578.9 327 87.8
CANSAT56G3591 Cannabis sativa HOM05D002908 ORTHO05D007390 5.6e-163 577.8 340 84.7
MD09G1208200 Malus domestica HOM05D002908 ORTHO05D007390 3.6e-162 575.1 345 83.8
Thecc.06G094700 Theobroma cacao HOM05D002908 ORTHO05D007390 8.1e-162 573.9 335 85.4
Glyma.08G203400 Glycine max HOM05D002908 ORTHO05D007390 3.1e-161 572.0 327 86.2
MD17G1189500 Malus domestica HOM05D002908 ORTHO05D007390 3.1e-161 572.0 335 84.2
Potri.001G186000 Populus trichocarpa HOM05D002908 ORTHO05D007390 5.2e-161 571.2 346 84.1
Dinv30470 Davidia involucrata HOM05D002908 ORTHO05D007390 8.9e-161 570.5 346 82.9
Glyma.07G018400 Glycine max HOM05D002908 ORTHO05D007390 1.5e-160 569.7 327 86.5
TWI18G0563 Tripterygium wilfordii HOM05D002908 ORTHO05D007390 2.0e-160 569.3 337 84.9
Ciclev10026026m.g Citrus clementina HOM05D002908 ORTHO05D007390 3.4e-160 568.5 329 85.7
Potri.003G051500 Populus trichocarpa HOM05D002908 ORTHO05D007390 3.4e-160 568.5 337 84.0
Manes.04G131100 Manihot esculenta HOM05D002908 ORTHO05D007390 9.9e-160 567.0 325 85.5
COL.COLO4_30459 Corchorus olitorius HOM05D002908 ORTHO05D007390 1.3e-159 566.6 336 84.2
FvH4_6g31910 Fragaria vesca HOM05D002908 ORTHO05D007390 1.3e-159 566.6 344 82.3
FAN14G2394 Fragaria x ananassa HOM05D002908 ORTHO05D007390 1.3e-159 566.6 344 82.3
Gorai.010G229600 Gossypium raimondii HOM05D002908 ORTHO05D007390 2.2e-159 565.8 335 83.9
Medtr8g013660 Medicago truncatula HOM05D002908 ORTHO05D007390 3.8e-159 565.1 339 83.5
Atru.chr1.3416 Acer truncatum HOM05D002908 ORTHO05D007390 4.9e-159 564.7 334 84.4
Ca_11526_v3 Cicer arietinum L. HOM05D002908 ORTHO05D007390 4.9e-159 564.7 339 84.4
RcHm_v2.0_Chr2g0139271 Rosa chinensis HOM05D002908 ORTHO05D007390 1.1e-158 563.5 344 82.0
GSVIVG01017049001 Vitis vinifera HOM05D002908 ORTHO05D007390 1.9e-158 562.8 333 85.0
FAN02G4032 Fragaria x ananassa HOM05D002908 ORTHO05D007390 2.4e-158 562.4 343 81.9
Duzib235G0543 Durio zibethinus HOM05D002908 ORTHO05D007390 3.2e-158 562.0 336 83.3
arahy.Tifrunner.gnm1.ann1.0NGS5F Arachis hypogaea HOM05D002908 ORTHO05D007390 4.2e-158 561.6 324 85.2
arahy.Tifrunner.gnm1.ann1.E6TYPI Arachis hypogaea HOM05D002908 ORTHO05D007390 4.2e-158 561.6 324 85.2
TPR.G14821 Trifolium pratense HOM05D002908 ORTHO05D007390 1.6e-157 559.7 338 83.1
FAN09G2740 Fragaria x ananassa HOM05D002908 ORTHO05D007390 3.5e-157 558.5 343 81.6
Manes.11G036900 Manihot esculenta HOM05D002908 ORTHO05D007390 3.5e-157 558.5 329 83.9
Sed0011260 Sechium edule HOM05D002908 ORTHO05D007390 1.7e-156 556.2 332 82.8
ClCG07G013190 Citrullus lanatus HOM05D002908 ORTHO05D007390 5.1e-156 554.7 332 82.8
Sabra03G0027500 Salix brachista HOM05D002908 ORTHO05D007390 1.5e-155 553.1 373 76.7
Actinidia32717 Actinidia chinensis HOM05D002908 ORTHO05D007390 5.6e-155 551.2 344 79.4
Gorai.011G073300 Gossypium raimondii HOM05D002908 ORTHO05D007390 7.3e-155 550.8 331 82.5
Duzib192G0943 Durio zibethinus HOM05D002908 ORTHO05D007390 9.6e-155 550.4 328 82.9
MELO3C012977.2 Cucumis melo HOM05D002908 ORTHO05D007390 1.3e-154 550.1 322 84.8
CsaV3_3G023830 Cucumis sativus L. HOM05D002908 ORTHO05D007390 1.3e-154 550.1 322 84.5
CSS0023180 Camellia sinensis var. sinensis HOM05D002908 ORTHO05D007390 2.1e-154 549.3 329 83.3
Nitab4.5_0009963g0020 Nicotiana tabacum HOM05D002908 ORTHO05D007390 5.3e-153 544.7 344 77.9
Peaxi162Scf00015g00145 Petunia axillaris HOM05D002908 ORTHO05D007390 5.3e-153 544.7 329 81.5
vmacro18877 Vaccinium macrocarpon HOM05D002908 ORTHO05D007390 1.5e-152 543.1 330 81.8
Migut.D01011 Erythranthe guttata HOM05D002908 ORTHO05D007390 2.0e-152 542.7 324 83.3
Eucgr.J02953 Eucalyptus grandis HOM05D002908 ORTHO05D007390 3.4e-152 542.0 324 82.7
Sopen06g024840 Solanum pennellii HOM05D002908 ORTHO05D007390 3.4e-152 542.0 336 80.1
Solyc06g066570.4 Solanum lycopersicum HOM05D002908 ORTHO05D007390 4.5e-152 541.6 336 80.1
PGR102G0394 Punica granatum HOM05D002908 ORTHO05D007390 7.6e-152 540.8 323 82.7
Cc06_g20260 Coffea canephora HOM05D002908 ORTHO05D007390 2.2e-151 539.3 335 79.7
Sc15g0002180 Simmondsia chinensis HOM05D002908 ORTHO05D007390 4.9e-151 538.1 329 80.5
HanXRQChr12g0360831 Helianthus annuus HOM05D002908 ORTHO05D007390 6.4e-151 537.7 334 79.9
Haze_16343 Corylus avellana HOM05D002908 ORTHO05D007390 1.1e-150 537.0 304 88.8
CAN.G1152.12 Capsicum annuum HOM05D002908 ORTHO05D007390 1.4e-150 536.6 334 79.0
PGSC0003DMG400016501 Solanum tuberosum HOM05D002908 ORTHO05D007390 1.4e-150 536.6 328 80.2
ECA234G0421 Erigeron canadensis HOM05D002908 ORTHO05D007390 7.1e-150 534.3 342 78.1
Lsat_1_v5_gn_5_131021 Lactuca sativa HOM05D002908 ORTHO05D007390 7.1e-150 534.3 337 77.7
Actinidia21691 Actinidia chinensis HOM05D002908 ORTHO05D007390 1.2e-149 533.5 335 80.3
Oeu000462.1 Olea europaea HOM05D002908 ORTHO05D007390 1.2e-149 533.5 341 79.2
MSTRG.4742 Avicennia marina HOM05D002908 ORTHO05D007390 2.7e-149 532.3 330 80.6
TAR624G0208 Trochodendron aralioides HOM05D002908 ORTHO05D007390 3.5e-149 531.9 332 80.4
MBI04_g14938_MAGBIO Magnolia biondii HOM05D002908 ORTHO05D007390 1.0e-148 530.4 333 79.6
HanXRQChr04g0096211 Helianthus annuus HOM05D002908 ORTHO05D007390 6.7e-148 527.7 329 79.6
SGA_v2.0_scaffold68G22970 Striga asiatica HOM05D002908 ORTHO05D007390 1.1e-147 526.9 325 80.0
AUR62011685 Chenopodium quinoa HOM05D002908 ORTHO05D007390 1.9e-147 526.2 325 79.1
THA.LOC104813553 Tarenaya hassleriana HOM05D002908 ORTHO05D007390 4.3e-147 525.0 329 78.1
Nn2g11662 Nelumbo nucifera HOM05D002908 ORTHO05D007390 5.6e-147 524.6 338 78.1
CARHR074760 Cardamine hirsuta HOM05D002908 ORTHO05D007390 9.6e-147 523.9 324 78.7
Nitab4.5_0000351g0020 Nicotiana tabacum HOM05D002908 ORTHO05D007390 1.6e-146 523.1 336 76.8
Sp5g35950 Schrenkiella parvula HOM05D002908 ORTHO05D007390 1.1e-145 520.4 326 78.2
EL10Ac9g22051 Beta vulgaris HOM05D002908 ORTHO05D007390 3.1e-145 518.8 334 74.9
AL2G41740 Arabidopsis lyrata HOM05D002908 ORTHO05D007390 2.0e-144 516.2 326 78.5
AT1G79810 Arabidopsis thaliana HOM05D002908 ORTHO05D007390 5.8e-144 514.6 328 78.0
Aqoxy7G01537 Aquilegia oxysepala HOM05D002908 ORTHO05D007390 7.6e-144 514.2 334 77.5
CDE05G0315 Ceratophyllum demersum HOM05D002908 ORTHO05D007390 2.9e-143 512.3 334 74.6
PSO566G0119 Papaver somniferum HOM05D002908 ORTHO05D007390 4.9e-143 511.5 335 77.3
Carub.0002s2769 Capsella rubella HOM05D002908 ORTHO05D007390 6.4e-143 511.1 324 78.4
A07p26340 Brassica napus HOM05D002908 ORTHO05D007390 8.4e-143 510.8 330 76.1
BraA07t30278Z Brassica rapa HOM05D002908 ORTHO05D007390 8.4e-143 510.8 330 76.1
PSO782G2745 Papaver somniferum HOM05D002908 ORTHO05D007390 1.1e-142 510.4 335 77.0
HPP92_002914 Vanilla planifolia HOM05D002908 ORTHO05D007390 1.1e-142 510.4 331 76.4
BolC6t38042H Brassica oleracea HOM05D002908 ORTHO05D007390 1.6e-141 506.5 330 75.8
TAR636G3411 Trochodendron aralioides HOM05D002908 ORTHO05D007390 1.6e-141 506.5 345 73.9
SGA_v2.0_scaffold4G02012 Striga asiatica HOM05D002908 ORTHO05D007390 2.1e-141 506.1 325 77.2
Thhalv10018845m.g Eutrema salsugineum HOM05D002908 ORTHO05D007390 1.3e-140 503.4 324 77.2
Hund00658 Selenicereus undatus HOM05D002908 ORTHO05D007390 2.3e-140 502.7 325 75.1
Lj3g0013088 Lotus japonicus HOM05D002908 ORTHO05D007390 6.7e-140 501.1 297 83.8
Rhsim08G0224800 Rhododendron simsii HOM05D002908 ORTHO05D007390 1.9e-139 499.6 331 77.0
Lj5C318G10 Lonicera japonica HOM05D002908 ORTHO05D007390 5.6e-139 498.0 303 82.2
unitig_736.g22790 Utricularia gibba HOM05D002908 ORTHO05D007390 5.6e-139 498.0 337 72.7
C06p28730 Brassica napus HOM05D002908 ORTHO05D007390 9.6e-139 497.3 321 76.6
Os05g0275700 Oryza sativa ssp. japonica HOM05D002908 ORTHO05D007390 3.7e-138 495.4 337 73.6
AUR62016511 Chenopodium quinoa HOM05D002908 ORTHO05D007390 2.0e-136 489.6 292 82.2
ATR0315G165 Amborella trichopoda HOM05D002908 ORTHO05D007390 2.7e-133 479.2 328 72.9
Aa31LG4G20 Aethionema arabicum HOM05D002908 ORTHO05D007390 3.5e-133 478.8 362 66.6
Prupe.3G064400 Prunus persica HOM05D002908 ORTHO05D007390 3.5e-133 478.8 265 88.7
Hund06642 Selenicereus undatus HOM05D002908 ORTHO05D007390 1.8e-132 476.5 298 78.9
CiPaw.02G148100 Carya illinoinensis HOM05D002908 ORTHO05D007390 6.7e-132 474.6 265 87.5
Sabra01G0154100 Salix brachista HOM05D002908 ORTHO05D007390 1.6e-130 469.9 321 77.3
Gohir.A06G188700 Gossypium hirsutum HOM05D002908 ORTHO05D007390 2.8e-130 469.2 258 87.6
Gohir.D06G197300 Gossypium hirsutum HOM05D002908 ORTHO05D007390 8.2e-130 467.6 258 87.2
Zm00001eb031430 Zea mays HOM05D002908 ORTHO05D007390 1.0e-127 460.7 290 77.9
DCAR_026336 Daucus carota HOM05D002908 ORTHO05D007390 2.7e-125 452.6 344 68.3
SalBow7G1474 Salvia bowleyana HOM05D002908 ORTHO05D007390 6.1e-125 451.4 349 68.5
Lsat_1_v5_gn_1_35361 Lactuca sativa HOM05D002908 ORTHO05D007390 8.5e-119 431.0 277 78.7
Gohir.D10G068700 Gossypium hirsutum HOM05D002908 ORTHO05D007390 5.5e-118 428.3 257 82.5
CiPaw.01G234600 Carya illinoinensis HOM05D002908 ORTHO05D007390 7.9e-117 424.5 232 89.2
Dinv38008 Davidia involucrata HOM05D002908 ORTHO05D007390 7.9e-109 397.9 229 85.6
Mapoly0052s0120 Marchantia polymorpha HOM05D002908 ORTHO05D007390 3.7e-106 389.0 337 59.9
Pp3c3_18540 Physcomitrium patens HOM05D002908 ORTHO05D007390 1.3e-103 380.6 337 58.5
SMO146G0339 Selaginella moellendorffii HOM05D002908 ORTHO05D007390 6.5e-103 378.3 330 58.8
Cpa.g.sc109.47 Carica papaya HOM05D002908 ORTHO05D007390 1.2e-83 314.3 207 78.3
Lalb_Chr25g0280041 Lupinus albus HOM05D002908 ORTHO05D007390 1.3e-82 310.8 278 63.3
CBR_g960 Chara braunii HOM05D002908 ORTHO05D007390 1.0e-79 301.2 319 51.7
Gohir.A10G083732 Gossypium hirsutum HOM05D002908 ORTHO05D007390 4.7e-77 292.4 182 80.8
SEGI_14821 Sequoiadendron giganteum HOM05D002908 ORTHO05D007390 3.0e-76 289.7 211 64.9
Psat4g199400 Pisum sativum HOM05D002908 ORTHO05D007390 3.5e-64 249.6 147 83.7
AagrBONN_evm.TU.Sc2ySwM_228.2361 Anthoceros agrestis HOM05D002908 ORTHO05D007390 1.2e-61 241.1 207 59.9
Sed0019299 Sechium edule HOM05D002908 ORTHO05D007390 1.2e-61 241.1 208 62.5
PGSC0003DMG400002631 Solanum tuberosum HOM05D002908 ORTHO05D007390 5.8e-51 205.7 316 44.0
Lsat_1_v5_gn_1_85060 Lactuca sativa HOM05D002908 ORTHO05D007390 5.4e-49 199.1 177 59.9
MCO16G131 Micromonas commoda HOM05D002908 ORTHO05D007390 5.4e-49 199.1 317 36.0
Solyc03g120520.2 Solanum lycopersicum HOM05D002908 ORTHO05D007390 9.2e-49 198.4 247 47.8
Cre17.g698800 Chlamydomonas reinhardtii HOM05D002908 ORTHO05D007390 4.4e-43 179.5 366 34.2
CAN.G438.36 Capsicum annuum HOM05D002908 ORTHO05D007390 3.0e-39 166.8 114 71.9
Lj5C56G8 Lonicera japonica HOM05D002908 ORTHO05D007390 1.6e-37 161.0 234 48.3
SEGI_00949 Sequoiadendron giganteum HOM05D002908 ORTHO05D007390 2.4e-33 147.1 120 64.2
PRCOL_00006980 Prasinoderma coloniale HOM05D000198 ORTHO05D003232 9.3e-33 145.2 322 34.8
Medtr7g090350 Medicago truncatula HOM05D002908 ORTHO05D007390 3.1e-20 103.6 249 34.5
Rhsim02G0192800 Rhododendron simsii HOM05D002908 ORTHO05D004240 1.5e-19 101.3 57 87.7
Sopen00g008760 Solanum pennellii HOM05D002908 ORTHO05D007390 5.5e-17 92.8 98 53.1
Rhsim03G0241200 Rhododendron simsii HOM05D002908 ORTHO05D050692 1.8e-15 87.8 45 88.9
Rhsim12G0105800 Rhododendron simsii HOM05D002908 ORTHO05D340239 5.7e-14 82.8 55 74.5
Lsat_1_v5_gn_3_20480 Lactuca sativa HOM05D001398 ORTHO05D011740 3.4e-11 73.6 78 51.3
Solyc12g027700.1 Solanum lycopersicum HOM05D002908 ORTHO05D050692 9.3e-09 65.5 30 93.3
Nn3g18125 Nelumbo nucifera HOM05D002908 ORTHO05D007390 6.7e-07 59.3 44 72.7


User provided reference genes

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