Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p016712 Quercus lobata HOM05D000706 ORTHO05D001633 3.0e-36 155.2 114 100.0
QL06p033989 Quercus lobata HOM05D000706 ORTHO05D001633 1.9e-14 82.8 118 59.3
Ca_24896_v3 Cicer arietinum L. HOM05D000706 ORTHO05D001633 8.1e-10 67.4 48 66.7
CiPaw.08G135700 Carya illinoinensis HOM05D000706 ORTHO05D001633 5.3e-09 64.7 119 41.2
Phvul.002G111600 Phaseolus vulgaris HOM05D000706 ORTHO05D001633 5.3e-09 64.7 48 64.6
Cfa006940 Carpinus fangiana HOM05D000706 ORTHO05D001633 9.0e-09 63.9 46 65.2
CiPaw.08G135500 Carya illinoinensis HOM05D000706 ORTHO05D001633 9.0e-09 63.9 119 41.2
VMungo1215G2634 Vigna mungo HOM05D000706 ORTHO05D001633 9.0e-09 63.9 48 62.5
Oeu021939.1 Olea europaea HOM05D000706 ORTHO05D001633 7.6e-08 60.8 46 56.5
CANSAT01G1453 Cannabis sativa HOM05D000706 ORTHO05D001633 9.9e-08 60.5 48 64.6
Ca_24897_v3 Cicer arietinum L. HOM05D000706 ORTHO05D001633 1.3e-07 60.1 47 59.6
Glyma.11G074600 Glycine max HOM05D000706 ORTHO05D001633 2.2e-07 59.3 48 58.3
Manes.02G101200 Manihot esculenta HOM05D000706 ORTHO05D001633 2.2e-07 59.3 124 36.3
Glyma.01G169000 Glycine max HOM05D000706 ORTHO05D001633 2.9e-07 58.9 48 58.3
Medtr5g021450 Medicago truncatula HOM05D000706 ORTHO05D001633 2.9e-07 58.9 45 60.0
Phvul.002G111700 Phaseolus vulgaris HOM05D000706 ORTHO05D001633 2.9e-07 58.9 48 56.2
Glyma.01G168900 Glycine max HOM05D000706 ORTHO05D001633 3.8e-07 58.5 48 58.3
ClCG07G008850 Citrullus lanatus HOM05D000706 ORTHO05D001633 6.4e-07 57.8 45 68.9
Duzib264G0704 Durio zibethinus HOM05D000706 ORTHO05D001633 6.4e-07 57.8 116 37.9
TPR.G2360 Trifolium pratense HOM05D000706 ORTHO05D001633 6.4e-07 57.8 48 54.2
CSS0048501 Camellia sinensis var. sinensis HOM05D000706 ORTHO05D001633 1.1e-06 57.0 46 63.0
CSS0050455 Camellia sinensis var. sinensis HOM05D000706 ORTHO05D001633 1.1e-06 57.0 46 63.0
Glyma.11G074400 Glycine max HOM05D000706 ORTHO05D001633 1.1e-06 57.0 48 54.2
Psat0s3997g0080 Pisum sativum HOM05D000706 ORTHO05D001633 1.1e-06 57.0 49 59.2
MELO3C017537.2 Cucumis melo HOM05D000706 ORTHO05D001633 1.9e-06 56.2 50 58.0
Medtr5g021500 Medicago truncatula HOM05D000706 ORTHO05D001633 1.9e-06 56.2 49 57.1
Rhsim08G0035300 Rhododendron simsii HOM05D000706 ORTHO05D001633 2.4e-06 55.8 47 59.6
VMungo1215G3412 Vigna mungo HOM05D000706 ORTHO05D001633 2.4e-06 55.8 48 52.1
FvH4_1g12170 Fragaria vesca HOM05D000706 ORTHO05D001633 3.2e-06 55.5 117 36.8
FAN26G0297 Fragaria x ananassa HOM05D000706 ORTHO05D001633 3.2e-06 55.5 117 39.3
Actinidia31014 Actinidia chinensis HOM05D000706 ORTHO05D001633 4.2e-06 55.1 48 58.3
Gohir.A11G042625 Gossypium hirsutum HOM05D000706 ORTHO05D001633 4.2e-06 55.1 118 35.6
Gohir.D11G046150 Gossypium hirsutum HOM05D000706 ORTHO05D001633 4.2e-06 55.1 118 35.6
Gorai.007G049500 Gossypium raimondii HOM05D000706 ORTHO05D001633 4.2e-06 55.1 118 35.6
CsaV3_4G005330 Cucumis sativus L. HOM05D000706 ORTHO05D001633 5.5e-06 54.7 48 56.2
RcHm_v2.0_Chr2g0099921 Rosa chinensis HOM05D000706 ORTHO05D001633 5.5e-06 54.7 117 38.5
Cpa.g.sc6.213 Carica papaya HOM05D000706 ORTHO05D001633 7.1e-06 54.3 116 34.5
Lalb_Chr16g0377621 Lupinus albus HOM05D000706 ORTHO05D001633 7.1e-06 54.3 48 56.2
CSS0022868 Camellia sinensis var. sinensis HOM05D000706 ORTHO05D001633 9.3e-06 53.9 45 60.0
CSS0044957 Camellia sinensis var. sinensis HOM05D002906 ORTHO05D003211 9.3e-06 53.9 45 60.0
FAN19G1544 Fragaria x ananassa HOM05D000706 ORTHO05D001633 9.3e-06 53.9 117 36.8
TPR.G2331 Trifolium pratense HOM05D000706 ORTHO05D001633 9.3e-06 53.9 40 62.5


User provided reference genes

Program Settings