Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p085886 Quercus lobata HOM05D003504 ORTHO05D004006 3.6e-45 184.5 91 100.0
Atru.chr8.1046 Acer truncatum HOM05D003504 ORTHO05D004006 2.0e-11 72.4 69 58.0
QL04p084696 Quercus lobata HOM05D003504 ORTHO05D004006 2.0e-11 72.4 69 59.4
Nitab4.5_0000348g0150 Nicotiana tabacum HOM05D003504 ORTHO05D004006 3.4e-11 71.6 69 55.1
Ciclev10010893m.g Citrus clementina HOM05D003504 ORTHO05D004006 5.9e-11 70.9 69 56.5
Duzib251G0447 Durio zibethinus HOM05D003504 ORTHO05D004006 5.9e-11 70.9 69 56.5
Sabra11G0015000 Salix brachista HOM05D003504 ORTHO05D004006 5.9e-11 70.9 69 56.5
CANSAT80G2607 Cannabis sativa HOM05D003504 ORTHO05D004006 7.7e-11 70.5 57 64.9
GSVIVG01014992001 Vitis vinifera HOM05D003504 ORTHO05D004006 7.7e-11 70.5 68 57.4
Cpa.g.sc34.42 Carica papaya HOM05D003504 ORTHO05D004006 1.0e-10 70.1 69 55.1
Haze_07798 Corylus avellana HOM05D003504 ORTHO05D004006 1.0e-10 70.1 69 56.5
Eucgr.K02348 Eucalyptus grandis HOM05D003504 ORTHO05D004006 1.0e-10 70.1 68 57.4
TWI60G1460 Tripterygium wilfordii HOM05D003504 ORTHO05D004006 1.0e-10 70.1 69 56.5
CiPaw.11G060700 Carya illinoinensis HOM05D003504 ORTHO05D004006 1.3e-10 69.7 69 56.5
FvH4_3g14770 Fragaria vesca HOM05D003504 ORTHO05D004006 1.3e-10 69.7 69 56.5
FAN11G1602 Fragaria x ananassa HOM05D003504 ORTHO05D004006 1.3e-10 69.7 69 56.5
FAN16G2874 Fragaria x ananassa HOM05D003504 ORTHO05D004006 1.3e-10 69.7 69 56.5
FAN21G0765 Fragaria x ananassa HOM05D003504 ORTHO05D004006 1.3e-10 69.7 69 56.5
Prupe.4G132800 Prunus persica HOM05D003504 ORTHO05D004006 1.3e-10 69.7 69 56.5
Ca_24184_v3 Cicer arietinum L. HOM05D003504 ORTHO05D004006 1.7e-10 69.3 69 55.1
Dinv25490 Davidia involucrata HOM05D003504 ORTHO05D004006 1.7e-10 69.3 68 55.9
FAN25G3182 Fragaria x ananassa HOM05D003504 ORTHO05D004006 1.7e-10 69.3 69 56.5
Glyma.08G148300 Glycine max HOM05D003504 ORTHO05D004006 1.7e-10 69.3 57 63.2
Glyma.15G212800 Glycine max HOM05D003504 ORTHO05D004006 1.7e-10 69.3 57 63.2
Gohir.A12G174150 Gossypium hirsutum HOM05D003504 ORTHO05D004006 1.7e-10 69.3 57 63.2
Gohir.A12G174251 Gossypium hirsutum HOM05D003504 ORTHO05D004006 1.7e-10 69.3 57 63.2
Gorai.008G189300 Gossypium raimondii HOM05D003504 ORTHO05D004006 1.7e-10 69.3 57 63.2
Lalb_Chr19g0133201 Lupinus albus HOM05D003504 ORTHO05D004006 1.7e-10 69.3 57 63.2
Medtr8g056900 Medicago truncatula HOM05D003504 ORTHO05D004006 1.7e-10 69.3 57 63.2
Phvul.011G177600 Phaseolus vulgaris HOM05D003504 ORTHO05D004006 1.7e-10 69.3 57 63.2
Psat4g137560 Pisum sativum HOM05D003504 ORTHO05D004006 1.7e-10 69.3 57 63.2
RcHm_v2.0_Chr5g0024301 Rosa chinensis HOM05D003504 ORTHO05D004006 1.7e-10 69.3 69 56.5
TPR.G9397 Trifolium pratense HOM05D003504 ORTHO05D004006 1.7e-10 69.3 57 63.2
TAR376G1097 Trochodendron aralioides HOM05D003504 ORTHO05D004006 1.7e-10 69.3 68 57.4
VMungo1127G1360 Vigna mungo HOM05D003504 ORTHO05D004006 1.7e-10 69.3 57 63.2
Thecc.02G366300 Theobroma cacao HOM05D003504 ORTHO05D004006 2.9e-10 68.6 69 53.6
vmacro15992 Vaccinium macrocarpon HOM05D003504 ORTHO05D004006 2.9e-10 68.6 68 55.9
CANSAT80G1492 Cannabis sativa HOM05D003504 ORTHO05D004006 3.8e-10 68.2 56 62.5
MD10G1209700 Malus domestica HOM05D003504 ORTHO05D004006 3.8e-10 68.2 57 63.2
Sed0010866 Sechium edule HOM05D003504 ORTHO05D004006 3.8e-10 68.2 71 53.5
ClCG09G022710 Citrullus lanatus HOM05D003504 ORTHO05D004006 5.0e-10 67.8 71 53.5
COL.COLO4_11259 Corchorus olitorius HOM05D003504 ORTHO05D004006 5.0e-10 67.8 69 53.6
MELO3C012607.2 Cucumis melo HOM05D003504 ORTHO05D004006 5.0e-10 67.8 71 53.5
CsaV3_7G022910 Cucumis sativus L. HOM05D003504 ORTHO05D004006 5.0e-10 67.8 71 53.5
Dinv42441 Davidia involucrata HOM05D003504 ORTHO05D004006 5.0e-10 67.8 69 53.6
arahy.Tifrunner.gnm1.ann1.G058EZ Arachis hypogaea HOM05D003504 ORTHO05D004006 6.5e-10 67.4 57 61.4
arahy.Tifrunner.gnm1.ann1.S8BAEK Arachis hypogaea HOM05D003504 ORTHO05D004006 6.5e-10 67.4 57 61.4
Lj3g0024547 Lotus japonicus HOM05D003504 ORTHO05D004006 6.5e-10 67.4 57 61.4
Nn1g07198 Nelumbo nucifera HOM05D003504 ORTHO05D004006 6.5e-10 67.4 66 54.5
Rhsim09G0069300 Rhododendron simsii HOM05D003504 ORTHO05D004006 6.5e-10 67.4 68 54.4
DCAR_001249 Daucus carota HOM05D003504 ORTHO05D004006 8.5e-10 67.0 66 54.5
Manes.17G018400 Manihot esculenta HOM05D003504 ORTHO05D004006 1.4e-09 66.2 57 61.4
Cfa019400 Carpinus fangiana HOM05D003504 ORTHO05D004006 1.9e-09 65.9 69 53.6
MD05G1229900 Malus domestica HOM05D003504 ORTHO05D004006 1.9e-09 65.9 57 61.4
Cc03_g16320 Coffea canephora HOM05D003504 ORTHO05D004006 2.5e-09 65.5 57 59.6
Potri.011G024000 Populus trichocarpa HOM05D003504 ORTHO05D004006 2.5e-09 65.5 69 53.6
Actinidia04335 Actinidia chinensis HOM05D003504 ORTHO05D004006 3.2e-09 65.1 57 59.6
MBI19_g24061_MAGBIO Magnolia biondii HOM05D003504 ORTHO05D004006 3.2e-09 65.1 68 52.9
Lj3C843G5 Lonicera japonica HOM05D003504 ORTHO05D004006 4.2e-09 64.7 66 53.0
PGR044G0024 Punica granatum HOM05D003504 ORTHO05D004006 4.2e-09 64.7 69 53.6
CSS0025770 Camellia sinensis var. sinensis HOM05D003504 ORTHO05D004006 7.2e-09 63.9 68 52.9
Thhalv10024194m.g Eutrema salsugineum HOM05D003504 ORTHO05D004006 9.4e-09 63.5 66 53.0
Aa31LG2G12370 Aethionema arabicum HOM05D003504 ORTHO05D004006 1.2e-08 63.2 57 57.9
AL7G38710 Arabidopsis lyrata HOM05D003504 ORTHO05D004006 1.2e-08 63.2 57 57.9
AT4G16340 Arabidopsis thaliana HOM05D003504 ORTHO05D004006 1.2e-08 63.2 57 57.9
BcaC09g50329 Brassica carinata HOM05D003504 ORTHO05D004006 1.2e-08 63.2 57 57.9
BcaNung00207 Brassica carinata HOM05D003504 ORTHO05D004006 1.2e-08 63.2 57 57.9
A01p21260 Brassica napus HOM05D003504 ORTHO05D004006 1.2e-08 63.2 57 57.9
C01p26570 Brassica napus HOM05D003504 ORTHO05D004006 1.2e-08 63.2 57 57.9
BolC1t02600H Brassica oleracea HOM05D003504 ORTHO05D004006 1.2e-08 63.2 57 57.9
BraA01t02033Z Brassica rapa HOM05D003504 ORTHO05D004006 1.2e-08 63.2 57 57.9
Carub.0007s2520 Capsella rubella HOM05D003504 ORTHO05D004006 1.2e-08 63.2 57 57.9
HanXRQChr06g0171691 Helianthus annuus HOM05D003504 ORTHO05D004006 1.2e-08 63.2 64 54.7
HanXRQChr17g0541121 Helianthus annuus HOM05D003504 ORTHO05D004006 1.2e-08 63.2 64 54.7
Nitab4.5_0001070g0090 Nicotiana tabacum HOM05D003504 ORTHO05D004006 1.2e-08 63.2 69 50.7
Oeu038381.1 Olea europaea HOM05D003504 ORTHO05D004006 1.2e-08 63.2 64 53.1
Sp7g14850 Schrenkiella parvula HOM05D003504 ORTHO05D004006 1.2e-08 63.2 57 57.9
Sopen08g006320 Solanum pennellii HOM05D003504 ORTHO05D004006 1.2e-08 63.2 69 50.7
CAN.G68.16 Capsicum annuum HOM05D003504 ORTHO05D004006 1.6e-08 62.8 69 50.7
ECA246G2710 Erigeron canadensis HOM05D003504 ORTHO05D004006 1.6e-08 62.8 57 57.9
Lsat_1_v5_gn_3_34601 Lactuca sativa HOM05D003504 ORTHO05D004006 1.6e-08 62.8 64 53.1
Migut.H02557 Erythranthe guttata HOM05D003504 ORTHO05D004006 2.7e-08 62.0 69 52.2
SalBow1G2205 Salvia bowleyana HOM05D003504 ORTHO05D004006 2.7e-08 62.0 57 57.9
Aqoxy3G00583 Aquilegia oxysepala HOM05D003504 ORTHO05D004006 4.7e-08 61.2 68 51.5
CARHR222710 Cardamine hirsuta HOM05D003504 ORTHO05D004006 4.7e-08 61.2 57 56.1
PSO541G5947 Papaver somniferum HOM05D003504 ORTHO05D004006 4.7e-08 61.2 68 51.5
Peaxi162Scf01205g00167 Petunia axillaris HOM05D003504 ORTHO05D004006 4.7e-08 61.2 57 56.1
Zm00001eb395310 Zea mays HOM05D003504 ORTHO05D004006 6.1e-08 60.8 63 50.8
Phvul.011G177325 Phaseolus vulgaris HOM05D003504 ORTHO05D004006 7.9e-08 60.5 57 56.1
ATR0068G076 Amborella trichopoda HOM05D003504 ORTHO05D004006 1.0e-07 60.1 68 50.0
Sc15g0007400 Simmondsia chinensis HOM05D003504 ORTHO05D004006 1.0e-07 60.1 69 50.7
MSTRG.21739 Avicennia marina HOM05D003504 ORTHO05D004006 1.8e-07 59.3 57 54.4
Lalb_Chr01g0007231 Lupinus albus HOM05D003504 ORTHO05D004006 2.3e-07 58.9 57 52.6
SEGI_34400 Sequoiadendron giganteum HOM05D003504 ORTHO05D004006 2.3e-07 58.9 66 50.0
Zm00001eb015660 Zea mays HOM05D003504 ORTHO05D004006 2.3e-07 58.9 57 52.6
THA.LOC104823022 Tarenaya hassleriana HOM05D003504 ORTHO05D004006 3.0e-07 58.5 57 50.9
PSO675G8441 Papaver somniferum HOM05D003504 ORTHO05D004006 6.7e-07 57.4 68 50.0
SGA_v2.0_scaffold161G37832 Striga asiatica HOM05D003504 ORTHO05D004006 6.7e-07 57.4 57 54.4
EL10Ac7g17310 Beta vulgaris HOM05D003504 ORTHO05D004006 1.1e-06 56.6 69 50.7
AUR62022352 Chenopodium quinoa HOM05D003504 ORTHO05D004006 1.1e-06 56.6 69 52.2
AUR62034357 Chenopodium quinoa HOM05D003504 ORTHO05D004006 1.1e-06 56.6 69 52.2
TAR623G0212 Trochodendron aralioides HOM05D003504 ORTHO05D004006 2.0e-06 55.8 56 57.1
Hund01269 Selenicereus undatus HOM05D003504 ORTHO05D004006 2.6e-06 55.5 69 50.7
Ah.15g092010 Amaranthus hybridus HOM05D003504 ORTHO05D004006 7.4e-06 53.9 66 50.0


User provided reference genes

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