Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p084884 Quercus lobata HOM05D003504 ORTHO05D004006 2.9e-57 224.9 108 100.0
QL04p084696 Quercus lobata HOM05D003504 ORTHO05D004006 1.9e-37 159.1 77 96.1
SalBow1G2205 Salvia bowleyana HOM05D003504 ORTHO05D004006 2.8e-36 155.2 77 92.2
Lalb_Chr19g0133201 Lupinus albus HOM05D003504 ORTHO05D004006 3.7e-36 154.8 77 92.2
CANSAT80G2607 Cannabis sativa HOM05D003504 ORTHO05D004006 4.8e-36 154.5 77 93.5
Cfa019400 Carpinus fangiana HOM05D003504 ORTHO05D004006 4.8e-36 154.5 77 92.2
ClCG09G022710 Citrullus lanatus HOM05D003504 ORTHO05D004006 4.8e-36 154.5 77 93.5
MELO3C012607.2 Cucumis melo HOM05D003504 ORTHO05D004006 4.8e-36 154.5 77 93.5
CsaV3_7G022910 Cucumis sativus L. HOM05D003504 ORTHO05D004006 4.8e-36 154.5 77 93.5
FvH4_3g14770 Fragaria vesca HOM05D003504 ORTHO05D004006 6.3e-36 154.1 77 93.5
FAN11G1602 Fragaria x ananassa HOM05D003504 ORTHO05D004006 6.3e-36 154.1 77 93.5
FAN16G2874 Fragaria x ananassa HOM05D003504 ORTHO05D004006 6.3e-36 154.1 77 93.5
MD10G1209700 Malus domestica HOM05D003504 ORTHO05D004006 6.3e-36 154.1 77 93.5
RcHm_v2.0_Chr5g0024301 Rosa chinensis HOM05D003504 ORTHO05D004006 6.3e-36 154.1 77 93.5
Migut.H02557 Erythranthe guttata HOM05D003504 ORTHO05D004006 8.2e-36 153.7 77 90.9
Sed0010866 Sechium edule HOM05D003504 ORTHO05D004006 8.2e-36 153.7 77 92.2
Ca_24184_v3 Cicer arietinum L. HOM05D003504 ORTHO05D004006 1.1e-35 153.3 77 92.2
Cc03_g16320 Coffea canephora HOM05D003504 ORTHO05D004006 1.1e-35 153.3 77 89.6
Lj3g0024547 Lotus japonicus HOM05D003504 ORTHO05D004006 1.1e-35 153.3 77 92.2
MD05G1229900 Malus domestica HOM05D003504 ORTHO05D004006 1.1e-35 153.3 77 92.2
Medtr8g056900 Medicago truncatula HOM05D003504 ORTHO05D004006 1.1e-35 153.3 77 92.2
Phvul.011G177600 Phaseolus vulgaris HOM05D003504 ORTHO05D004006 1.1e-35 153.3 77 92.2
TPR.G9397 Trifolium pratense HOM05D003504 ORTHO05D004006 1.1e-35 153.3 77 92.2
VMungo1127G1360 Vigna mungo HOM05D003504 ORTHO05D004006 1.1e-35 153.3 77 92.2
Thecc.02G366300 Theobroma cacao HOM05D003504 ORTHO05D004006 1.4e-35 152.9 77 90.9
arahy.Tifrunner.gnm1.ann1.S8BAEK Arachis hypogaea HOM05D003504 ORTHO05D004006 1.8e-35 152.5 77 90.9
CiPaw.11G060700 Carya illinoinensis HOM05D003504 ORTHO05D004006 1.8e-35 152.5 77 92.2
Prupe.4G132800 Prunus persica HOM05D003504 ORTHO05D004006 1.8e-35 152.5 77 92.2
arahy.Tifrunner.gnm1.ann1.G058EZ Arachis hypogaea HOM05D003504 ORTHO05D004006 2.4e-35 152.1 77 89.6
Dinv42441 Davidia involucrata HOM05D003504 ORTHO05D004006 2.4e-35 152.1 77 90.9
FAN21G0765 Fragaria x ananassa HOM05D003504 ORTHO05D004006 2.4e-35 152.1 77 92.2
Glyma.08G148300 Glycine max HOM05D003504 ORTHO05D004006 2.4e-35 152.1 77 90.9
Glyma.15G212800 Glycine max HOM05D003504 ORTHO05D004006 2.4e-35 152.1 77 90.9
MSTRG.21739 Avicennia marina HOM05D003504 ORTHO05D004006 3.1e-35 151.8 77 89.6
COL.COLO4_11259 Corchorus olitorius HOM05D003504 ORTHO05D004006 3.1e-35 151.8 77 89.6
SGA_v2.0_scaffold161G37832 Striga asiatica HOM05D003504 ORTHO05D004006 3.1e-35 151.8 77 89.6
TAR376G1097 Trochodendron aralioides HOM05D003504 ORTHO05D004006 3.1e-35 151.8 77 88.3
Dinv25490 Davidia involucrata HOM05D003504 ORTHO05D004006 4.1e-35 151.4 77 90.9
Gohir.A12G174201 Gossypium hirsutum HOM05D003504 ORTHO05D004006 4.1e-35 151.4 77 89.6
Gohir.A12G174251 Gossypium hirsutum HOM05D003504 ORTHO05D004006 4.1e-35 151.4 77 89.6
Gohir.D12G176932 Gossypium hirsutum HOM05D003504 ORTHO05D004006 4.1e-35 151.4 77 89.6
Gorai.008G189300 Gossypium raimondii HOM05D003504 ORTHO05D004006 4.1e-35 151.4 77 89.6
HanXRQChr06g0171691 Helianthus annuus HOM05D003504 ORTHO05D004006 4.1e-35 151.4 78 89.7
Nn1g07198 Nelumbo nucifera HOM05D003504 ORTHO05D004006 4.1e-35 151.4 77 89.6
TWI60G1460 Tripterygium wilfordii HOM05D003504 ORTHO05D004006 4.1e-35 151.4 77 89.6
GSVIVG01014992001 Vitis vinifera HOM05D003504 ORTHO05D004006 4.1e-35 151.4 77 89.6
FAN25G3182 Fragaria x ananassa HOM05D003504 ORTHO05D004006 5.3e-35 151.0 77 92.2
Manes.17G018400 Manihot esculenta HOM05D003504 ORTHO05D004006 5.3e-35 151.0 76 90.8
Rhsim09G0069300 Rhododendron simsii HOM05D003504 ORTHO05D004006 5.3e-35 151.0 77 88.3
Actinidia04335 Actinidia chinensis HOM05D003504 ORTHO05D004006 6.9e-35 150.6 77 88.3
Potri.011G024000 Populus trichocarpa HOM05D003504 ORTHO05D004006 6.9e-35 150.6 77 89.6
Sabra11G0015000 Salix brachista HOM05D003504 ORTHO05D004006 6.9e-35 150.6 77 89.6
unitig_60.g25589 Utricularia gibba HOM05D003504 ORTHO05D004006 6.9e-35 150.6 77 89.6
ECA246G2710 Erigeron canadensis HOM05D003504 ORTHO05D004006 9.0e-35 150.2 77 89.6
Lalb_Chr01g0007231 Lupinus albus HOM05D003504 ORTHO05D004006 9.0e-35 150.2 77 90.9
Lj3C843G5 Lonicera japonica HOM05D003504 ORTHO05D004006 1.2e-34 149.8 77 88.3
MBI19_g24061_MAGBIO Magnolia biondii HOM05D003504 ORTHO05D004006 1.2e-34 149.8 77 89.6
Atru.chr8.1046 Acer truncatum HOM05D003504 ORTHO05D004006 1.5e-34 149.4 77 88.3
CAN.G68.16 Capsicum annuum HOM05D003504 ORTHO05D004006 2.0e-34 149.1 77 87.0
DCAR_001249 Daucus carota HOM05D003504 ORTHO05D004006 2.0e-34 149.1 77 88.3
Nitab4.5_0000348g0160 Nicotiana tabacum HOM05D003504 ORTHO05D004006 2.0e-34 149.1 77 87.0
Nitab4.5_0001070g0090 Nicotiana tabacum HOM05D003504 ORTHO05D004006 2.0e-34 149.1 77 87.0
Peaxi162Scf01205g00192 Petunia axillaris HOM05D003504 ORTHO05D004006 2.0e-34 149.1 77 87.0
Solyc08g016060.1 Solanum lycopersicum HOM05D003504 ORTHO05D004006 2.0e-34 149.1 77 87.0
Sopen08g006320 Solanum pennellii HOM05D003504 ORTHO05D004006 2.0e-34 149.1 77 87.0
Zm00001eb015660 Zea mays HOM05D003504 ORTHO05D004006 2.6e-34 148.7 77 87.0
Zm00001eb395310 Zea mays HOM05D003504 ORTHO05D004006 2.6e-34 148.7 77 87.0
Ciclev10010893m.g Citrus clementina HOM05D003504 ORTHO05D004006 3.4e-34 148.3 77 87.0
Duzib251G0447 Durio zibethinus HOM05D003504 ORTHO05D004006 3.4e-34 148.3 77 87.0
HanXRQChr17g0541121 Helianthus annuus HOM05D003504 ORTHO05D004006 3.4e-34 148.3 77 88.3
EL10Ac7g17310 Beta vulgaris HOM05D003504 ORTHO05D004006 4.5e-34 147.9 77 85.7
Psat4g137560 Pisum sativum HOM05D003504 ORTHO05D004006 5.9e-34 147.5 77 89.6
Hund01269 Selenicereus undatus HOM05D003504 ORTHO05D004006 7.6e-34 147.1 77 85.7
AUR62022352 Chenopodium quinoa HOM05D003504 ORTHO05D004006 1.0e-33 146.7 82 80.5
PSO675G8441 Papaver somniferum HOM05D003504 ORTHO05D004006 1.0e-33 146.7 77 87.0
Oeu038381.1 Olea europaea HOM05D003504 ORTHO05D004006 1.3e-33 146.4 77 88.3
Sp7g14850 Schrenkiella parvula HOM05D003504 ORTHO05D004006 1.3e-33 146.4 77 85.7
Ah.15g092010 Amaranthus hybridus HOM05D003504 ORTHO05D004006 1.7e-33 146.0 77 84.4
ATR0068G076 Amborella trichopoda HOM05D003504 ORTHO05D004006 1.7e-33 146.0 77 83.1
Eucgr.K02348 Eucalyptus grandis HOM05D003504 ORTHO05D004006 1.7e-33 146.0 77 88.3
PGR044G0024 Punica granatum HOM05D003504 ORTHO05D004006 1.7e-33 146.0 77 88.3
AUR62034357 Chenopodium quinoa HOM05D003504 ORTHO05D004006 2.9e-33 145.2 77 84.4
PSO541G5947 Papaver somniferum HOM05D003504 ORTHO05D004006 2.9e-33 145.2 77 85.7
Aqoxy3G00583 Aquilegia oxysepala HOM05D003504 ORTHO05D004006 3.8e-33 144.8 77 87.0
AT4G16340 Arabidopsis thaliana HOM05D003504 ORTHO05D004006 3.8e-33 144.8 77 85.7
Cpa.g.sc34.43 Carica papaya HOM05D003504 ORTHO05D004006 3.8e-33 144.8 77 85.7
HPP92_006681 Vanilla planifolia HOM05D003504 ORTHO05D004006 3.8e-33 144.8 77 85.7
Aa31LG2G12370 Aethionema arabicum HOM05D003504 ORTHO05D004006 5.0e-33 144.4 77 85.7
BcaC09g50329 Brassica carinata HOM05D003504 ORTHO05D004006 5.0e-33 144.4 77 85.7
A01p21260 Brassica napus HOM05D003504 ORTHO05D004006 5.0e-33 144.4 77 85.7
C01p26570 Brassica napus HOM05D003504 ORTHO05D004006 5.0e-33 144.4 77 85.7
BolC1t02600H Brassica oleracea HOM05D003504 ORTHO05D004006 5.0e-33 144.4 77 85.7
BraA01t02033Z Brassica rapa HOM05D003504 ORTHO05D004006 5.0e-33 144.4 77 85.7
Thhalv10024194m.g Eutrema salsugineum HOM05D003504 ORTHO05D004006 5.0e-33 144.4 77 85.7
Lsat_1_v5_gn_3_34601 Lactuca sativa HOM05D003504 ORTHO05D004006 5.0e-33 144.4 77 87.0
AL7G38710 Arabidopsis lyrata HOM05D003504 ORTHO05D004006 1.1e-32 143.3 77 84.4
Carub.0007s2520 Capsella rubella HOM05D003504 ORTHO05D004006 1.1e-32 143.3 77 84.4
CDE08G0995 Ceratophyllum demersum HOM05D003504 ORTHO05D004006 1.1e-32 143.3 77 84.4
BcaNung00207 Brassica carinata HOM05D003504 ORTHO05D004006 1.9e-32 142.5 77 84.4
TAR623G0212 Trochodendron aralioides HOM05D003504 ORTHO05D004006 1.9e-32 142.5 77 83.1
THA.LOC104823022 Tarenaya hassleriana HOM05D003504 ORTHO05D004006 1.2e-31 139.8 77 81.8
SEGI_34400 Sequoiadendron giganteum HOM05D003504 ORTHO05D004006 1.6e-31 139.4 77 83.1
CARHR222710 Cardamine hirsuta HOM05D003504 ORTHO05D004006 6.1e-31 137.5 77 81.8
CANSAT80G1492 Cannabis sativa HOM05D003504 ORTHO05D004006 1.4e-30 136.3 78 82.1
Mapoly0021s0072 Marchantia polymorpha HOM05D003504 ORTHO05D004006 1.9e-29 132.5 77 80.5
AagrBONN_evm.TU.Sc2ySwM_228.1501 Anthoceros agrestis HOM05D003504 ORTHO05D004006 6.9e-27 124.0 77 75.3
SMO011G0025 Selaginella moellendorffii HOM05D003504 ORTHO05D004006 1.5e-26 122.9 77 72.7
Pp3c1_25190 Physcomitrium patens HOM05D003504 ORTHO05D004006 4.5e-26 121.3 78 69.2
Pp3c15_8680 Physcomitrium patens HOM05D003504 ORTHO05D004006 3.8e-25 118.2 77 68.8
Pp3c9_15160 Physcomitrium patens HOM05D003504 ORTHO05D004006 3.8e-25 118.2 77 68.8
Pp3c10_16640 Physcomitrium patens HOM05D003504 ORTHO05D004006 4.2e-24 114.8 77 70.1
vmacro15991 Vaccinium macrocarpon HOM05D003504 ORTHO05D004006 7.2e-24 114.0 164 42.7
Pp3c4_25310 Physcomitrium patens HOM05D003504 ORTHO05D004006 9.4e-24 113.6 78 69.2
Pp3c3_15370 Physcomitrium patens HOM05D003504 ORTHO05D004006 2.7e-23 112.1 78 66.7
CBR_g22314 Chara braunii HOM05D003504 ORTHO05D004006 2.8e-20 102.1 86 61.6
Peaxi162Scf00280g00008 Petunia axillaris HOM05D003504 ORTHO05D004006 9.4e-16 87.0 83 56.6
Haze_18583 Corylus avellana HOM05D002115 ORTHO05D002263 1.2e-15 86.7 43 93.0
CSS0012196 Camellia sinensis var. sinensis HOM05D003504 ORTHO05D004006 1.8e-14 82.8 40 92.5
Haze_07798 Corylus avellana HOM05D003504 ORTHO05D004006 6.7e-14 80.9 80 58.8
Sc15g0007400 Simmondsia chinensis HOM05D003504 ORTHO05D004006 1.7e-12 76.3 40 82.5
Lj6A705G41 Lonicera japonica HOM05D003504 ORTHO05D004006 3.6e-07 58.5 86 44.2


User provided reference genes

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