Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p005302 Quercus lobata HOM05D006280 ORTHO05D007876 1.4e-193 679.5 350 100.0
QL04p005401 Quercus lobata HOM05D000011 ORTHO05D000157 1.7e-58 230.7 214 61.2
QL04p005292 Quercus lobata HOM05D006280 ORTHO05D007876 1.2e-51 208.0 202 61.9
QL04p005267 Quercus lobata HOM05D006280 ORTHO05D007876 4.5e-43 179.5 218 53.7
Haze_03235 Corylus avellana HOM05D006280 ORTHO05D007876 5.5e-41 172.6 218 51.8
Thecc.01G413600 Theobroma cacao HOM05D006280 ORTHO05D007876 3.7e-37 159.8 218 47.2
CiPaw.13G003200 Carya illinoinensis HOM05D006280 ORTHO05D007876 2.6e-35 153.7 195 51.8
TWI09G0861 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 7.7e-35 152.1 246 43.5
Duzib268G1473 Durio zibethinus HOM05D006280 ORTHO05D007876 5.2e-31 139.4 218 41.7
Gohir.D11G166400 Gossypium hirsutum HOM05D006280 ORTHO05D007876 2.6e-30 137.1 214 42.5
Gorai.007G177400 Gossypium raimondii HOM05D006280 ORTHO05D007876 5.7e-30 136.0 214 42.1
Gohir.A11G160200 Gossypium hirsutum HOM05D006280 ORTHO05D007876 3.7e-29 133.3 214 41.1
Dinv09374 Davidia involucrata HOM05D006280 ORTHO05D007876 4.1e-28 129.8 271 39.1
Dinv14267 Davidia involucrata HOM05D006280 ORTHO05D007876 2.0e-27 127.5 284 39.8
Lj9A629T105 Lonicera japonica HOM05D006280 ORTHO05D007876 3.5e-27 126.7 221 43.9
Prupe.2G009900 Prunus persica HOM05D006280 ORTHO05D007876 5.9e-27 125.9 177 48.6
Ciclev10030953m.g Citrus clementina HOM05D006280 ORTHO05D007876 6.5e-26 122.5 202 40.6
Potri.009G064200 Populus trichocarpa HOM05D006280 ORTHO05D007876 2.5e-25 120.6 179 46.9
TWI73G0538 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 3.6e-24 116.7 182 46.2
CSS0048133 Camellia sinensis var. sinensis HOM05D006280 ORTHO05D007876 4.0e-23 113.2 239 42.3
MD02G1315100 Malus domestica HOM05D006280 ORTHO05D007876 8.8e-23 112.1 199 42.7
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 1.2e-22 111.7 221 38.5
Cpa.g.sc234.10 Carica papaya HOM05D006280 ORTHO05D007876 1.5e-22 111.3 191 42.4
Eucgr.J01260 Eucalyptus grandis HOM05D006280 ORTHO05D007876 5.7e-22 109.4 202 37.6
MELO3C023535.2 Cucumis melo HOM05D006280 ORTHO05D007876 1.3e-21 108.2 193 37.8
Potri.001G269700 Populus trichocarpa HOM05D006280 ORTHO05D007876 1.3e-21 108.2 188 42.0
Sed0005202 Sechium edule HOM05D006280 ORTHO05D007876 1.3e-21 108.2 193 35.8
Sed0013445 Sechium edule HOM05D006280 ORTHO05D007876 1.3e-21 108.2 200 37.5
ClCG09G004310 Citrullus lanatus HOM05D006280 ORTHO05D007876 1.7e-21 107.8 180 39.4
Sc14g0005130 Simmondsia chinensis HOM05D006280 ORTHO05D007876 1.7e-21 107.8 201 41.8
THA.LOC104817627 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 2.2e-21 107.5 225 38.2
THA.LOC104802360 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 3.7e-21 106.7 218 38.5
Migut.B01331 Erythranthe guttata HOM05D006280 ORTHO05D007876 1.8e-20 104.4 270 34.1
PGR044G1516 Punica granatum HOM05D006280 ORTHO05D007876 1.8e-20 104.4 201 40.8
GSVIVG01032060001 Vitis vinifera HOM05D006280 ORTHO05D007876 1.8e-20 104.4 197 38.1
Rhsim01G0130600 Rhododendron simsii HOM05D006280 ORTHO05D007876 9.1e-20 102.1 282 34.0
MSTRG.20601 Avicennia marina HOM05D006280 ORTHO05D007876 1.0e-18 98.6 270 33.7
CAN.G170.124 Capsicum annuum HOM05D006280 ORTHO05D007876 1.7e-18 97.8 253 32.0
Nitab4.5_0003361g0010 Nicotiana tabacum HOM05D006280 ORTHO05D007876 2.3e-18 97.4 267 33.0
PGSC0003DMG400006815 Solanum tuberosum HOM05D006280 ORTHO05D007876 1.1e-17 95.1 267 30.7
SalBow7G2237 Salvia bowleyana HOM05D006280 ORTHO05D007876 1.9e-17 94.4 257 33.1
QL04p005379 Quercus lobata HOM05D000011 ORTHO05D007876 2.5e-17 94.0 202 41.6
Sopen01g033930 Solanum pennellii HOM05D006280 ORTHO05D007876 7.2e-17 92.4 267 30.3
TAR636G3118 Trochodendron aralioides HOM05D006280 ORTHO05D007876 2.1e-16 90.9 231 35.5
Nitab4.5_0001542g0030 Nicotiana tabacum HOM05D006280 ORTHO05D007876 4.7e-16 89.7 267 30.3
Nn2g15492 Nelumbo nucifera HOM05D006280 ORTHO05D007876 1.8e-15 87.8 226 29.6
vmacro21180 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 1.8e-15 87.8 250 33.6
RcHm_v2.0_Chr1g0314941 Rosa chinensis HOM05D006280 ORTHO05D007876 2.3e-15 87.4 176 40.9
AUR62028915 Chenopodium quinoa HOM05D006280 ORTHO05D007876 5.2e-15 86.3 199 34.2
FAN03G0134 Fragaria x ananassa HOM05D006280 ORTHO05D007876 6.8e-15 85.9 234 35.5
Manes.07G004300 Manihot esculenta HOM05D006280 ORTHO05D007876 6.8e-15 85.9 128 48.4
Hund03633 Selenicereus undatus HOM05D006280 ORTHO05D007876 1.2e-14 85.1 194 34.0
SGA_v2.0_scaffold119G32715 Striga asiatica HOM05D006280 ORTHO05D007876 2.6e-14 84.0 138 43.5
Hma1.2p1_0280F.1_g112910 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 3.4e-14 83.6 184 39.1
SGA_v2.0_scaffold167G38459 Striga asiatica HOM05D006280 ORTHO05D007876 4.4e-14 83.2 264 29.9
Oeu039119.3 Olea europaea HOM05D006280 ORTHO05D007876 9.8e-14 82.0 189 36.0
EL10Ac6g13519 Beta vulgaris HOM05D006280 ORTHO05D007876 1.7e-13 81.3 183 34.4
Sabra09G0047500 Salix brachista HOM05D006280 ORTHO05D007876 4.9e-13 79.7 410 28.3
Lsat_1_v5_gn_4_46080 Lactuca sativa HOM05D006280 ORTHO05D007876 4.1e-12 76.6 249 29.3
MBI01_g40597_MAGBIO Magnolia biondii HOM05D006280 ORTHO05D007876 5.4e-12 76.3 335 29.3
CANSAT01G2414 Cannabis sativa HOM05D006280 ORTHO05D007876 1.6e-11 74.7 224 33.0
Lalb_Chr03g0033951 Lupinus albus HOM05D006280 ORTHO05D007876 1.6e-11 74.7 172 32.0
Cc02_g27560 Coffea canephora HOM05D006280 ORTHO05D007876 2.7e-11 73.9 331 26.3
Lj3g0014839 Lotus japonicus HOM05D006280 ORTHO05D007876 3.5e-11 73.6 306 28.1
Peaxi162Scf00428g00816 Petunia axillaris HOM05D006280 ORTHO05D007876 1.0e-10 72.0 377 26.3
Aa31LG10G7200 Aethionema arabicum HOM05D006280 ORTHO05D007876 3.9e-10 70.1 197 31.5
Actinidia20679 Actinidia chinensis HOM05D006280 ORTHO05D007876 1.9e-09 67.8 240 31.2
Manes.10G146200 Manihot esculenta HOM05D006280 ORTHO05D007876 1.9e-09 67.8 84 50.0
unitig_8.g3860 Utricularia gibba HOM05D006280 ORTHO05D007876 1.9e-09 67.8 165 32.7
C04p40810 Brassica napus HOM05D006280 ORTHO05D007876 1.6e-08 64.7 186 35.5
BolC4t25665H Brassica oleracea HOM05D006280 ORTHO05D007876 1.6e-08 64.7 186 35.5
ECA234G4003 Erigeron canadensis HOM05D006280 ORTHO05D007876 1.6e-08 64.7 166 30.7
PSO447G0216 Papaver somniferum HOM05D006280 ORTHO05D007876 3.6e-08 63.5 193 33.7
Medtr8g036940 Medicago truncatula HOM05D006280 ORTHO05D007876 4.7e-08 63.2 182 31.3
TPR.G21742 Trifolium pratense HOM05D006280 ORTHO05D007876 5.2e-07 59.7 194 29.9
BcaC02g09279 Brassica carinata HOM05D006280 ORTHO05D007876 1.2e-06 58.5 170 35.3
Ca_23874_v3 Cicer arietinum L. HOM05D006280 ORTHO05D007876 2.0e-06 57.8 163 31.3
BcaB02g08586 Brassica carinata HOM05D006280 ORTHO05D007876 2.6e-06 57.4 143 32.9
PSO210G6643 Papaver somniferum HOM05D006280 ORTHO05D007876 2.6e-06 57.4 160 31.9
FvH4_7g00721 Fragaria vesca HOM05D006280 ORTHO05D007876 4.4e-06 56.6 127 38.6
CARHR161840 Cardamine hirsuta HOM05D006280 ORTHO05D007876 7.5e-06 55.8 175 31.4
HanXRQChr16g0519571 Helianthus annuus HOM05D006280 ORTHO05D007876 7.5e-06 55.8 175 28.0
Psat4g148560 Pisum sativum HOM05D006280 ORTHO05D007876 7.5e-06 55.8 324 28.1
AL5G32680 Arabidopsis lyrata HOM05D006280 ORTHO05D007876 9.8e-06 55.5 179 30.7
SEGI_32119 Sequoiadendron giganteum HOM05D006280 ORTHO05D007876 9.8e-06 55.5 97 39.2


User provided reference genes

Program Settings