Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p068420 Quercus lobata HOM05D004594 ORTHO05D005225 1.2e-127 459.9 245 100.0
QL03p068116 Quercus lobata HOM05D004594 ORTHO05D005225 2.8e-76 289.3 280 66.8
Haze_11988 Corylus avellana HOM05D004594 ORTHO05D005225 3.7e-44 182.6 281 49.1
QL03p068157 Quercus lobata HOM05D004594 ORTHO05D005225 7.3e-40 168.3 160 63.8
Cfa008959 Carpinus fangiana HOM05D004594 ORTHO05D005225 1.1e-35 154.5 281 44.8
CiPaw.05G132100 Carya illinoinensis HOM05D004594 ORTHO05D005225 1.1e-35 154.5 281 44.5
CiPaw.06G087400 Carya illinoinensis HOM05D004594 ORTHO05D005225 9.2e-27 124.8 283 41.0
Manes.05G104800 Manihot esculenta HOM05D004594 ORTHO05D005225 2.4e-22 110.2 279 36.9
Manes.01G034200 Manihot esculenta HOM05D004594 ORTHO05D005225 7.6e-21 105.1 274 37.6
Ciclev10030522m.g Citrus clementina HOM05D004594 ORTHO05D005225 9.9e-21 104.8 291 36.1
CANSAT64G0453 Cannabis sativa HOM05D004594 ORTHO05D005225 7.1e-19 98.6 294 36.4
FAN22G0563 Fragaria x ananassa HOM05D004594 ORTHO05D005225 3.5e-18 96.3 267 36.0
TAR629G1990 Trochodendron aralioides HOM05D004594 ORTHO05D005225 1.3e-17 94.4 272 34.6
Potri.010G166100 Populus trichocarpa HOM05D004594 ORTHO05D005225 3.0e-17 93.2 286 35.7
TWI75G1472 Tripterygium wilfordii HOM05D004594 ORTHO05D005225 3.0e-17 93.2 252 36.9
FAN17G1193 Fragaria x ananassa HOM05D004594 ORTHO05D005225 8.7e-17 91.7 264 37.1
MD16G1069300 Malus domestica HOM05D004594 ORTHO05D005225 8.7e-17 91.7 303 35.0
Medtr5g042000 Medicago truncatula HOM05D004594 ORTHO05D005225 1.1e-16 91.3 318 34.0
Atru.chr11.1748 Acer truncatum HOM05D004594 ORTHO05D005225 1.5e-16 90.9 240 39.2
FvH4_4g31060 Fragaria vesca HOM05D004594 ORTHO05D005225 2.5e-16 90.1 264 36.7
RcHm_v2.0_Chr4g0439441 Rosa chinensis HOM05D004594 ORTHO05D005225 2.5e-16 90.1 217 39.2
Lj2g0016635 Lotus japonicus HOM05D004594 ORTHO05D005225 4.3e-16 89.4 265 35.8
Actinidia11790 Actinidia chinensis HOM05D004594 ORTHO05D005225 2.1e-15 87.0 268 36.6
Phvul.003G045700 Phaseolus vulgaris HOM05D004594 ORTHO05D005225 3.1e-14 83.2 269 34.6
FAN12G0764 Fragaria x ananassa HOM05D004594 ORTHO05D005225 4.0e-14 82.8 263 35.4
FAN07G2218 Fragaria x ananassa HOM05D004594 ORTHO05D005225 2.6e-13 80.1 264 36.0
TWI79G0308 Tripterygium wilfordii HOM05D004594 ORTHO05D005225 2.6e-13 80.1 134 44.8
Ca_04825_v3 Cicer arietinum L. HOM05D004594 ORTHO05D005225 5.8e-13 79.0 315 31.7
ClCG09G021930 Citrullus lanatus HOM05D004594 ORTHO05D005225 1.3e-12 77.8 276 31.9
Lj3E852G2 Lonicera japonica HOM05D004594 ORTHO05D005225 1.7e-12 77.4 263 32.7
VMungo1215G3128 Vigna mungo HOM05D004594 ORTHO05D005225 4.9e-12 75.9 275 33.5
PGR119G1944 Punica granatum HOM05D004594 ORTHO05D005225 1.1e-11 74.7 123 47.2
Glyma.02G109900 Glycine max HOM05D004594 ORTHO05D005225 2.4e-11 73.6 277 31.4
Lalb_Chr10g0098431 Lupinus albus HOM05D004594 ORTHO05D005225 2.4e-11 73.6 280 33.9
GSVIVG01019950001 Vitis vinifera HOM05D004594 ORTHO05D005225 4.2e-11 72.8 264 33.0
Actinidia04099 Actinidia chinensis HOM05D004594 ORTHO05D005225 7.1e-11 72.0 225 36.0
Dinv02961 Davidia involucrata HOM05D004594 ORTHO05D005225 9.3e-11 71.6 270 33.7
Psat2g116320 Pisum sativum HOM05D004594 ORTHO05D005225 9.3e-11 71.6 277 32.9
MELO3C002967.2 Cucumis melo HOM05D004594 ORTHO05D005225 1.2e-10 71.2 225 33.8
CsaV3_5G025180 Cucumis sativus L. HOM05D004594 ORTHO05D005225 1.2e-10 71.2 225 34.2
Duzib248G1210 Durio zibethinus HOM05D004594 ORTHO05D005225 1.2e-10 71.2 133 42.1
Prupe.1G277900 Prunus persica HOM05D004594 ORTHO05D005225 1.2e-10 71.2 286 32.9
Sed0022637 Sechium edule HOM05D004594 ORTHO05D005225 1.6e-10 70.9 276 32.2
TAR371G0293 Trochodendron aralioides HOM05D004594 ORTHO05D005225 2.7e-10 70.1 238 33.2
Sabra10G0126400 Salix brachista HOM05D004594 ORTHO05D005225 1.7e-09 67.4 283 31.4
Gohir.D04G191200 Gossypium hirsutum HOM05D004594 ORTHO05D005225 3.0e-09 66.6 122 41.0
Gorai.012G186600 Gossypium raimondii HOM05D004594 ORTHO05D005225 3.0e-09 66.6 122 41.0
ECA233G5935 Erigeron canadensis HOM05D004594 ORTHO05D005225 3.9e-09 66.2 227 33.9
CAN.G194.5 Capsicum annuum HOM05D004594 ORTHO05D005225 6.6e-09 65.5 231 35.9
HanXRQChr17g0540651 Helianthus annuus HOM05D004594 ORTHO05D005225 8.7e-09 65.1 246 30.5
ECA246G2651 Erigeron canadensis HOM05D004594 ORTHO05D005225 1.5e-08 64.3 254 33.9
arahy.Tifrunner.gnm1.ann1.KB2NSX Arachis hypogaea HOM05D004594 ORTHO05D005225 8.1e-07 58.5 292 29.1
Lsat_1_v5_gn_8_32581 Lactuca sativa HOM05D004594 ORTHO05D005225 1.4e-06 57.8 202 35.6
A09p24110 Brassica napus HOM05D004594 ORTHO05D005225 1.8e-06 57.4 152 37.5
BraA09t38011Z Brassica rapa HOM05D004594 ORTHO05D005225 1.8e-06 57.4 152 37.5
Solyc04g008680.4 Solanum lycopersicum HOM05D004594 ORTHO05D005225 1.8e-06 57.4 226 34.1
Nn1g04524 Nelumbo nucifera HOM05D004594 ORTHO05D005225 2.4e-06 57.0 273 29.3
Rhsim09G0077000 Rhododendron simsii HOM05D004594 ORTHO05D005225 2.4e-06 57.0 303 29.0
Sopen04g003850 Solanum pennellii HOM05D004594 ORTHO05D005225 2.4e-06 57.0 268 32.1
TPR.G34709 Trifolium pratense HOM05D004594 ORTHO05D005225 3.1e-06 56.6 275 31.6
C09p31000 Brassica napus HOM05D004594 ORTHO05D005225 4.0e-06 56.2 166 36.1
DCAR_013185 Daucus carota HOM05D004594 ORTHO05D005225 4.0e-06 56.2 280 31.4
Cpa.g.sc25.130 Carica papaya HOM05D004594 ORTHO05D005225 6.9e-06 55.5 157 33.8
Eucgr.G02485 Eucalyptus grandis HOM05D004594 ORTHO05D005225 6.9e-06 55.5 245 31.8
AT2G03150 Arabidopsis thaliana HOM05D004594 ORTHO05D005225 9.0e-06 55.1 151 37.1


User provided reference genes

Program Settings